Nematolebias whitei (Rio pearlfish): 119410681
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Entry
119410681 CDS
T08042
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119410681
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
119410681
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
OxoGdeHyase_C
Motif
Other DBs
NCBI-GeneID:
119410681
NCBI-ProteinID:
XP_037533494
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All DBs
Position
6:34969832..35005571
Genome browser
AA seq
2109 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNIFCLADLTGIKWRCFVWQGPTSSPILFPTEEDPILCSFSRCL
AADVLSVWRRHQTRGRRELWLFWWGDDPSFAELIHNELSSEEDGEWDSGLSYECRTLLFK
AIHNLLERCLMNRGFVRIGKWFVKPYQKEEKIINKSEHLSCAFTFFVHGDSNVCTSVEIA
QHQPLQRLSDEHLSLAQQSSSPLQVILSPYGLNGTLTGQAFKMSDHPTQKLIEEWRQFYP
ICPNSKEAQEDKMDDSDWEDDSLAAVEVLVAGVRMVYPSCLVLLPLSDLPAMVPQGSANT
PGSQCGAQQGQTTHRDSAISSVTLTPPTSPEEAHTDYQPAHRWLKLSSASDCYNSNNTLH
GGKIPRRLAGQMVESVWQEYNINRTGNKRKLTNLTNGACEEEPDNTGLWDFVESTCRPTC
NCSRHKNQKQRSSSTSGHPPSSGQPAQLAPKHKLGEKLDKAEKQQRRPQTPFHHRNSVSE
EQSLEPQNPRLCSRPLEEGSYPSLHHLDTVPPKAPTLHSHGPPADLVGSPPPPPLSPHPC
DHVEGDLIPGSIKNSSTPIHQPFYPPSVEPCLMPQKSSSEEPQIDNVPMSLSFPSAFNES
LEPTVFVGSAVNPSEDSTYNPWKYFNLPRKKNSSFSPPQLPVDKARDDCGGGTDSVVSVT
ELMCNSSQPLKVSQDLVKTYTQRRNSHLVSSTGDREHSEESDPYAFVEDEEDNFTEKDKS
GSEKEGNKKQKLDEATGTSADDGQGPSGNKPSASTSLFHENDLAVSYSDLEKIFNSDEDD
PGSGPKKAGIGIEDDINCKKTKPTLLDRLPCVSPVDLHKMFPTPPSLEHQGYSPMNSGSN
DSPETGSSLTVLDVSQLNSHFKVEVEEGFCSPKPSEIKDFSFVYKPETCQSIIGCSMYAP
LKTLPSQCLSPIKLPENCMYTLSWTMGKMELIPPVSSVSLLTKDSNVPSVEPDYSQTYTP
QTHTPFMSSSAPPSNGGTGILPSPATPRFSVPTPRTPRTPRTPRGPSSVQGSLKYDNSDL
YSPASTPSTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVCVCNMN
IRGADVGVYLKDNGEAQYPCTCGFSAVTNRRFGQSAGLFLEDELDVVGRGSDASRDTERC
FEELRGSLKEKPPDELILLLQDRCTNPFAHFAGVEYSKPSLAPTSFLRVEERDCYNDCYM
ALEHGRQFMDNMSGGKVDETLVKSTSLHQWPKCKSADMSKLFSQDVLRVLLSLQPVLQDT
IQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGL
PYWEKLLLDPFGSQRDLGYVVICPENEALLRGAKTFFKDLGVMYEACQLGQHKPICKSHP
EGILTVGTSEGRSMTEQPLSDWFLKMAAREGNNEAFNKLKLFAQVCRYDLAPILSELPLD
SSLLSQRNPTTAPSFLQSSHSSSNSSGLQSTNISSTGSAQTAQVNSTPPSSSSSQTIGAM
ASGKPSSYLPFGSGGLQGSTTHNDPQSNSQGAGSQAENGSSQPQGSTETPESTMERDKVG
KPTDGESHAISYPPAIVVYVVDPFSYEDADREVHSSTYALGLLRCYMEMLPFLPAHIRNA
VSVQIVPCQYLLQPVRSGERHVYSQHLKSLAFSVYTQCRRPLPGSTNFKALTGFGPGLAI
DMALKNPERPECLRLYTPPFILAPVKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLL
ASCTDHHGELLESCIISIDVPNRARRKKGSARRLGLQKLWDWCVGLVQVTSLPWRVVIGR
LGRMGHGELRDWSILLSRRNLQSLSKRLKETCRMCGISAADTPSILSTCLVAMEPQGSFV
IMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAMVQVNTNTSEPIDISFN
PINPDGSDGMGFFDLFDNDIDHDMVDSDLINILPNSPTTSPVHSPGSHYPQGGDGSKGPG
ADRMESHEEALNILQQPMALGYFISTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVS
SVQTDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCNPATQDRRSCLPVHFVVLTQ
IYNFVMNML
NT seq
6330 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgctttgtaccaaacggggccagtttggaggactgccactccaacatcttc
tgcctggctgatctgactggaataaaatggcggtgttttgtgtggcaaggacccacctct
tcgcccatcctcttcccgactgaggaggaccccatcctgtgtagtttcagccgatgcctg
gccgcagatgtgctgagtgtgtggagaaggcaccagacccggggtcgcagggagctttgg
cttttctggtggggggatgaccccagtttcgcggagcttatccacaatgagctctcgagt
gaggaggatggcgagtgggacagcggcctgtcctacgagtgtcggacactcctcttcaaa
gccattcacaacctgttggagcgctgtctcatgaaccgcggcttcgttcgcatcggcaag
tggttcgttaagccataccagaaggaggagaagatcatcaacaaaagcgagcacctgtct
tgcgcgttcaccttcttcgttcacggtgacagcaacgtttgcacgagtgtggagatcgcc
cagcatcaacctctccagagactcagcgacgagcaccttagcctcgcgcagcagagttcc
agcccgctgcaagttatcctcagcccatatggtttgaacgggactctcaccggccaggct
ttcaagatgtcagatcaccctactcagaagctcatagaggagtggaggcagttttatccc
atttgccccaattccaaggaggcccaagaagacaagatggatgattcagactgggaggat
gactccctggcagctgtggaagtccttgtcgcgggagtcaggatggtctacccgtcctgt
ctggtgcttctccccctgtcagacctccctgccatggtccctcagggctcagccaacacc
ccggggagccagtgtggtgctcagcagggccagacgactcacagagactctgccatatcc
tctgttaccctgactcctccaacgtcaccagaagaggctcacactgactatcagcctgct
cacaggtggctaaagctgtcctctgcgtccgattgctacaactcaaataacactcttcat
ggggggaaaatcccccggaggctggctggccagatggtggagtccgtatggcaggaatat
aacataaaccgtacagggaacaaaaggaagttaacaaacttgacgaacggagcgtgtgag
gaggagcctgacaacactggactctgggattttgtggaatcaacttgcagaccaacttgc
aattgttcaaggcataagaatcagaagcagcggtctagcagtacctcaggacacccacct
tcctcaggccagcctgcccagctggcccccaagcacaagctgggtgagaagctggacaag
gcagagaagcagcagaggaggccgcagacgccttttcaccaccgcaactctgtgagcgag
gagcagtccctggaaccgcagaacccgaggctctgctcaagaccgctggaggagggctcg
tatcccagcctgcaccatctggacacggtgcctcctaaagcccccacgctgcactcacac
ggcccacctgcagacctagtcgggtcccctcctccccctcctctcagcccgcatccgtgc
gatcacgtagaaggtgacctaatccctgggtccattaagaactcttccacgcctattcac
caaccattctacccgccatcagtggagccctgtctgatgcctcagaaaagctcctctgaa
gaaccacagatagacaacgttcccatgtcgttgtccttcccctcagcctttaatgaaagt
ctggaacctaccgtgtttgtaggctcagctgtaaacccaagtgaagactccacttacaac
ccctggaagtatttcaacttacccaggaagaagaattccagtttctcgccacctcagctg
cctgtagataaagcacgtgatgattgtggtggaggaactgacagtgtggtttctgtcact
gagttgatgtgcaactcctcgcagcctctgaaggtgtcccaggacctggtgaagacatac
acccagcggagaaacagccatctcgtctcctccactggggacagagaacacagtgaggaa
tcggatccttacgcctttgtagaggacgaggaggacaactttacagagaaggacaagtct
gggtctgagaaggaaggcaacaagaaacagaagctggatgaagcaactggaacttctgcc
gacgatggtcagggtccatcaggcaataaaccttcagcctcaaccagcctcttccacgaa
aacgacttggcagtgtcttacagtgacttagagaaaatatttaactcggacgaagatgat
ccagggtctggccccaaaaaagctggcattggtattgaagatgacattaactgtaaaaaa
actaaaccaactctcttggatcgtctgccttgcgtcagcccggtagacctgcacaagatg
tttcccaccccgccctcacttgaacaccagggctactctcccatgaactccgggagcaac
gatagtccggaaacggggtcgagtctcaccgtactggacgtcagccagcttaacagccac
ttcaaggtggaggtagaggagggtttctgcagcccaaagccatctgagattaaggacttc
tcctttgtgtataagccagagacatgtcagtctatcattggctgttccatgtacgccccc
ctaaagacactacccagccagtgtctgtctcctatcaaactgccagaaaactgcatgtac
acgctgagctggaccatgggcaaaatggaactgatacccccagtgtcgagtgtcagtctc
ctcaccaaagacagtaatgtcccgagtgtggagccagactacagccagacctacacccct
cagacccacacgcccttcatgtccagcagcgctcctccgagcaacggcggcaccggcatc
ctgccttctccagccacaccgcgcttctccgtgcccacgcctcgcacgccacgcactcca
cgaacgccccgcggcccgtccagtgtccagggctccctaaagtacgacaactccgacctt
tactccccggcgtccacaccctccacctgtcgacctctcagctctgtggagccggccacc
gtgccctccatccccgaggcgcacagcctctacgtcacgctcatactttccgagtccgtc
atgaaccttttcaaggactgcaacttcgacagctgctgcgtgtgtgtctgcaacatgaac
atccggggggcagacgtgggcgtgtacctcaaggataatggcgaggctcagtatccatgc
acttgtggctttagcgctgtaaccaacaggcgcttcggccaatcagctgggctgtttctg
gaggatgagctggacgtagtggggcgcggctcggacgccagtcgggacacggagcgttgc
ttcgaggagctgagaggcagcctgaaagagaagcctccagatgagctgatcctgctgctt
caggaccggtgcaccaacccgttcgcacattttgcgggtgtggagtactccaaaccgagc
ttggccccaacttcgttcctgagggtcgaagagagggactgttataacgactgctacatg
gcactggagcacggcaggcagttcatggacaacatgtcgggaggaaaagtggatgaaaca
ctagtgaaaagcaccagccttcaccagtggcctaagtgtaaatcagcagacatgagcaag
ctgttttctcaggacgtcttgcgagtgttgttgtccctccagcccgtgctgcaggacacc
atccagaagaagaggagtgttcgctcttggggtgttcagggacccctcacctggcaacag
ttccacaaaatggctgggaggggttcatatggtacagatgagtctccagagcctctaccc
atcccgacctttctggtcggttatgaatatgattttgtagtactctctccttttgggtta
ccctactgggaaaagctgctcctagatccttttggttcccagcgggatttgggatatgtc
gtcatttgtccagaaaacgaggcgctactccgtggagccaagacttttttcaaggatctg
ggtgtcatgtacgaggcatgccagctggggcagcacaagcccatctgcaagagtcaccca
gagggtattctgacagtcggcacctcagaaggaaggagcatgacagagcagcctctcagt
gactggttcctcaagatggccgccagagaagggaacaatgaagccttcaataagctcaaa
ctctttgctcaagtctgtcgttacgatctagctccgatcctttccgagctgcctttggat
agttccctcttgtctcagcgcaatcccaccacagccccctcgttcttgcagtcctcccac
tcttccagcaactcctcaggactccagagcaccaacatttccagcaccggctcagcccag
actgcccaggtcaacagcacccctccctcctcgtcaagctcccagaccatcggggctatg
gcctcaggcaagccaagctcctacttgccgtttgggtcagggggcttgcagggcagcact
actcataacgatccacagtccaattctcaaggtgcagggagccaggctgaaaatggatcc
agtcagcctcaaggatccacagagacaccggagagcaccatggagagagacaaagtgggc
aaaccaacagacggagagtcgcacgccatttcttacccgcctgcaatagtggtttacgtc
gtggaccccttcagctacgaagacgcagacagggaggttcactccagcacctacgctctg
ggcctgctgcgctgctacatggagatgctcccattcctacctgctcacatcagaaacgct
gtctcagttcagatcgttccctgtcagtacctgctgcagccggtgcgcagcggcgagcgt
cacgtctacagccagcacctgaagtctttggccttctccgtgtacactcagtgtcgccgg
cctctccccggctccaccaacttcaaggccctgaccggattcgggcccggactcgccatc
gacatggcactcaagaacccagagcgtcccgagtgtctgcgtctgtacacgccgcccttc
attctggctccggtgaaagacaagcagacggagctcggcgagacgtttggcgaggcctcg
cagaagtacaacgtcctgtttgtcggctactgcctgtctcatgaccagcgctggctgctg
gcgtcttgcaccgaccatcacggagaactgctggagtcctgcatcatcagtattgacgta
cccaacagagcgcgcaggaaaaaaggctcagccagacggctgggattacagaagctgtgg
gattggtgcgtcggcctggttcaggtcacgtctctgccatggagggtggtgattggacgg
ctcggcaggatgggacacggcgagttgagagactggagtattctgctgagcaggaggaac
ttacagtccctcagtaagcgtctgaaggagacgtgtaggatgtgtggcatctctgccgcc
gacacgcccagcatcctcagcacctgtctggttgccatggaaccacaaggttcctttgtg
atcatgccagactccgtgtcaacgggttcggtgtttggtcgcagtaccacactcaacatg
cagacgtctcagctgagcacgcctcaggacacgtcctgcacgcacatcctggtgttcccc
acctcggccatggttcaggtcaacacgaacacatcagagcccatcgacatcagcttcaac
cccataaaccctgatggatctgatggcatgggcttctttgatctctttgacaatgacatt
gatcatgacatggtggattcagacctcatcaacatcctgcccaactccccaacaacctct
cctgttcactctcctggttcacactaccctcaaggaggagatggaagcaagggcccgggt
gcagatcgtatggagtcccacgaggaggctctgaacatcctgcagcagccgatggctttg
ggttatttcatctccacagctaaggccggacctctgcctgactggttctggtcagcctgt
ccacaagctcaaaaccagtgcccgctcttcctcaaggcctccctgcacctgcacgtgtct
tcagtccagacggacgagcttcttcacagtaaacactcccatcctctggactcgaaccac
acctctgatgtgctcagatttgttctggagcagtacaacgccctctcctggctgacctgc
aaccctgcgacccaggaccggcgctcctgtctgcccgttcacttcgtggtgctcacacag
atctacaacttcgtcatgaacatgctctga
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integrated database retrieval system
