Nematolebias whitei (Rio pearlfish): 119410712
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Entry
119410712 CDS
T08042
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119410712 (btaf1)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119410712 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_2
HEAT_GCN1_C
HEAT_MROH2B_C
TPR_Trm732_C
HEAT_GCN1
Vac14_Fab1_bd
HEAT_EZ
ARM_ECM29
Lebercilin
Motif
Other DBs
NCBI-GeneID:
119410712
NCBI-ProteinID:
XP_037533534
LinkDB
All DBs
Position
1:44932109..44954906
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AA seq
1858 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNTLLSKVLTYLRSPSWDTRI
AAGQAVEAIVKNIPKWNPSPRPKDESGAGSSPEDSSCDRLSFYHFDVSRLLKHGASLLGS
AGAEFELQDDQTGETDPKERLARQRKLLQKKLGLDMGAAIGMDTEELFNDEDLDYSCQPS
GLRAQEIRPTAGCSSRNHVTIQAAELIDSEFRSGMSSRQKNKAKRMAKLVAKQKSRDVDP
NEKSNDSFEGEPEEKRRKTTVVIDQPATEHKVLIDTVPDNSSLLEETHEWPLESFCEELC
NDLFNPSWEIRHGAGTGLREILKSQGAAGGKVVGSTAEQMLRQHQGWIEDLVIRLLCVFA
LDRFGDFVSDEVVAPVRETCAQALGVALRHMNENGVSMTVDVLLKLLKEDQWEVRHGGLL
GIKYALAVRQDLICLLLPRVLPAITDGLQDLDDDVRAVAAAALIPVVDGLVQLLPQEVPF
IVNTLWDALLDLDDLTASTNSIMTLLSLLLTYPQVRQCSLQQSLTVLVPRVWPFLRHTIS
SVRKAALETLHTLLSKADQSCAVWINPILQDMLRHIFQSCILESNEEILELIQKVWMELL
SQAPQQFVVAASCPWVAAWLCLMMQASHIPIDLKMLLEVKARCNSKDKGGTKARQGTNQV
KETVQEYIAGAETVTEDPVTRDYVVVRARLMAAKLLGALCRCICDPQLNAASQEIRPAES
LGQLLLFHLNSKSALQRIAVALVLCEWAALQKDCQMVSSTVQPRLLAILTEQLYYDEIAI
PFTRMQNECKQLMALLADAHVELQDRLNCSVFTIDQANELVTTVFTETTSGLNVTSKRWL
ALESKRQQAQATVTETNTEWQQLHQRVHLFAACAVINLQMLPDKLNPVVRPLMEAVKREE
NALIQSYAASFISKLLQQCAGRSPCPNPKIIKNLSASCCVDPAVTPSSGCPVPPLQENLK
GSGLEKDGVHHIVNKTQGIITLYRHQRAAFAITSKRGPAPKNPKTPTTELPPGSTISTDN
DESKKPLLIQRRGAEFTLTTIARHFGTNLAKCLPYLWESTVGPLRTAAMADLSIDRAAQL
ERGDAAAQELVNSLQVLEVMAGAMAAELRPLLLEHLPHLFTCLQHPYTAVRHMAARCVGV
FSKIATLETMNRFLECVLHWLAAIDDRTKQEGAIEALACVMEQLDVDIVPYIVLLVVPVL
GRMSDPGDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIEQKARERHFLEQLLDGRK
LENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLR
TQEYAQTKAADSSPLPSLVVCPPTLTGHWVDEVEKFCAKEYLNPLHYMGPPIERMRLQHQ
VKKHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQIAANFRVILS
GTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEAL
HRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKASVEDSISSVS
SEEEEKPKLKATGHVFQALQYLRKLCNHPSLVLTQQHPEYKRITEQLAAQNSGLRDIQHA
PKLSALRQLLLDCGLGGGGGSEGATEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKLPSVT
YLRLDGSVPAGQRHAIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRD
LQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVINQENTSLQSMGTDQ
LLNLFTLDTDEKGSAGEQASSTSGKASIKSVLDGLGELWDQQQYDSEYNLDSFMHSLH
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttcgagactcgatcgtctgtttatcctgctggacacggggacgacgccggtg
acccggaaggcagcggcccagcagctcggagaagtggtcaaacttcacccacatgaactc
aacaccctcctgtcaaaggtcttgacctacctgaggagtcccagctgggacactcggatc
gcagcgggccaagctgtggaggccatcgtgaagaatattcccaagtggaacccgtctcca
aggcctaaagacgaatctggtgcaggttcgtctccggaggactcgtcttgtgaccggttg
agtttttaccacttcgacgtctcccgcctgcttaaacacggcgcgtcgctgctcggatct
gctggagccgagttcgagctgcaggatgatcaaaccggtgagacggacccaaaggaacgt
ctggcccgtcagaggaagctcctccagaagaagctgggcctggacatgggtgctgccatt
gggatggacacagaggagctgttcaacgacgaagacttggattattcctgtcaaccgagc
gggcttcgagctcaggagattagacctacagctggctgcagctccagaaaccatgtgacg
atccaagctgccgagctgatcgactccgagtttcggtcgggcatgagcagccgccagaag
aacaaggccaagaggatggctaaactcgtggccaagcagaagtccagagacgtggatcct
aacgaaaagagcaacgacagttttgaaggcgagcctgaggagaaacgaagaaaaacgacc
gtcgtcatcgaccagccagccaccgaacataaagtcttgatcgacactgttccagataac
tccagtcttctggaggagacccacgagtggcctctggagagcttctgtgaagagctttgc
aacgatctcttcaacccttcatgggagattcgtcacggtgcgggcacaggtcttagagag
attctcaagtctcaaggtgcggcaggtgggaaagtggttggaagtactgcagagcagatg
ctgcgacagcatcagggctggatcgaggatctggtcatccgtctcctctgtgtgtttgcc
ttggatcgttttggagactttgtatccgatgaggtggtggcgcccgtcagggagacgtgt
gctcaggctctcggcgtggcccttcgtcacatgaatgaaaacggtgtctcgatgacggtg
gacgtcctgctgaagctgctgaaagaggaccagtgggaggtccggcatggaggcctgctg
gggatcaagtatgccttggccgtccgtcaggacctgatttgtttgttgctgccccgggtt
ctgcctgccatcacggacggcctgcaggacctggacgatgacgtcagggccgtggcggct
gcagcactcatcccagtggtggacggtttggtgcagcttttaccgcaggaggtgcccttc
atcgtcaacacattatgggatgctcttctggacctggacgacctcacggcctccaccaac
agcataatgactctgctgtccctgctgctgacctacccacaggtccgacagtgcagtttg
cagcagtcgctcacagtcctggttcctcgcgtttggccgttcttaagacacaccatctca
tcggttagaaaggcagcgctggaaacgttgcacactctgctgtccaaggccgaccagagt
tgtgcggtttggatcaaccccatattacaagacatgctgcgacacattttccagtcctgc
attctggaaagcaacgaggaaatcctggaactgattcaaaaggtgtggatggagctgctg
tctcaggccccccagcagttcgtggtggccgccagctgcccgtgggtggcggcctggctc
tgcctcatgatgcaggcctcacacattcctatagacctgaaaatgctgctggaggtcaag
gcccgctgcaactccaaggataagggcgggacgaaggcgcgtcaggggaccaatcaggtg
aaggagacggttcaggagtacatagccggtgctgagacggtgacagaagatcctgtgacg
agggactacgtggtggttcgtgctcgactcatggctgcaaagctgctgggggctctgtgc
aggtgcatctgtgaccctcagctcaacgctgcgtctcaggagatcagaccggccgagtct
ttaggtcagctgctgctcttccacctcaactccaagtccgccctgcagcggatagcggtg
gcgctggtgctttgtgagtgggccgcgctgcagaaggattgccagatggtgtcgtccacg
gtgcagcctcggctcctggccatcctgacagagcagctgtactacgatgagatcgccatc
cccttcacgcgcatgcagaacgagtgcaagcagctcatggcgttactggctgatgcacac
gtggagctgcaggaccgcctcaactgtagcgtcttcaccatcgaccaagccaacgaactg
gtaaccaccgtgtttacagagacgacgtctggtctgaacgtcacgtccaaacggtggcta
gctttggagagtaaacggcagcaggctcaggctacggtgacggagacgaacacggagtgg
cagcagctgcatcagcgcgtccacctgttcgcagcgtgtgccgtcatcaacctgcagatg
cttccagacaaactcaaccccgtggtccggcccctgatggaggccgtcaaacgggaggag
aacgctctgatccagagctacgccgcttcgttcatctccaagctgctgcagcagtgtgcc
ggccgctcgccgtgccccaacccaaagatcatcaaaaacctcagtgcctcgtgctgcgtg
gaccccgcagtcacgccctcatcgggttgtcccgtgcccccgttgcaggaaaacctcaaa
ggtagtggcttggaaaaagatggcgtgcatcacattgtgaacaaaacccaagggatcatc
accctgtaccggcaccagagggctgcgtttgccatcaccagtaagaggggtccggcccca
aaaaaccccaaaactcccacaacagagcttcctccgggcagcaccataagcaccgacaac
gatgagagtaaaaagccattactgatccagaggagaggggcggagttcactctgacgacc
attgccaggcacttcggtacaaacctcgccaagtgtctgccgtacctctgggagagcacg
gtggggcctttgagaaccgcggccatggcagatctgtccattgatcgagcggctcagctg
gagcgaggcgacgctgcagctcaggaactggtcaactctctgcaagttctggaggtcatg
gctggagccatggctgctgagctcaggccgttgttactggaacacctgcctcatctgttc
acctgcctgcagcacccgtacaccgcagtgcgacacatggcggcgcgctgcgtaggtgtg
ttcagtaagatcgccaccctggagaccatgaaccgtttcctggagtgtgttctccactgg
ttagctgctattgatgaccgcaccaagcaggagggcgccatcgaagctttagcttgcgtc
atggagcagctcgatgtagacatcgtgccctacatcgtgctgctggtggttccggtgttg
ggccgcatgagcgaccccggggacagcatccgcttcatggccacgcagtgtttcgccaca
ctgatccgcctgctgccgctggaggcaggtatccctgatccaccggccatgtctgctgac
ctgatcgagcagaaagcaagagagcgtcacttcttggagcagctgttggatgggagaaag
ctggagaactacaagatcccggtgccgattaaagccgagctcaggaagtaccagcaggac
ggagtgaactggttggccttcctcaacaaatacaagctgcacgggatactgtgtgacgac
atgggccttggaaagacgctgcagtccatctgcatcctggcaggagatcactacctcagg
acacaggaatacgcccagaccaaggctgcagacagcagccctctcccctccctggtggtg
tgtcctcccacgctcacgggccactgggtggacgaagtggaaaagttctgtgccaaggag
tacctgaacccgctgcattacatggggcctcctatagaacggatgcggttgcagcatcaa
gtgaaaaaacacaatctcatcgtcgcctcttacgacgtcgtacggaacgacatcgacttt
tttaggaacatcaaatttaattactgcatcctcgacgagggtcacgtcatcaagaacggc
aaaaccaaactctccaaagccatcaaacagatcgctgcaaacttcagggtcatcttatca
ggaacacccattcagaacaacgtcctggagctctggtccttgttcgacttcctcatgccg
ggtttcctgggaacggaacggcagtttgctgctcgctacgggaaacccatcctggccagc
cgggacgccaagagctcctcgcgagaacaggaagcaggagtcctggccatggaagccttg
catcgacaggtgctgcctttccttctgaggaggatgaaggaggacgtcctccaggatctt
cctcctaaaataattcaggactactactgcaacctgagccctctgcaggtccagctttac
gaagactttgccaagtccagagccaaggccagcgtggaggacagcatctcttcggtctcg
agtgaggaagaggagaagcctaaactgaaggccacgggccacgtcttccaggcgctgcag
tacctgcgtaagctgtgcaaccacccgagcttggttctgacccagcagcatccagagtac
aagcggatcacggagcagctggcggctcagaactcgggcctgcgggacattcagcacgcg
cccaaactctccgccctcagacagctgctgctggactgtggtctgggtggtggaggaggg
tccgaaggcgccaccgaggccgtggtggcccagcaccgcgtgctgattttctgtcagctg
aagagcatgctggacatcgtagagcacgacctgctgaagcccaaactgccgtcagtaacc
tacctgaggctggacggcagcgtgccggccgggcagcgccacgccatcgtctccaggttt
aacaatgatccgtccatcgacgtgctgctgctcaccacacatgttggtggtctgggtttg
aacctgaccggcgccgataccgtggtgttcgtggagcacgactggaaccccatgagggac
ctgcaggccatggatcgggctcatcggatcggacagaaacgggtcgtcaacgtctacagg
ctgatcactcgaggcacgctggaggagaagatcatggggctgcagaagttcaagatgagc
atcgccaacaccgtcatcaaccaggagaacaccagcctgcagagcatgggcacggaccag
ctgctcaacctgttcaccctggacacggatgagaagggaagcgcaggtgagcaggcatcg
tcaacctcagggaaggcctccatcaagtccgttctggacggcctgggggagctgtgggac
cagcagcagtacgactccgagtacaacctggacagcttcatgcactcgttgcattag
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integrated database retrieval system
