Nematolebias whitei (Rio pearlfish): 119410779
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Entry
119410779 CDS
T08042
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119410779 (rffl)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
119410779 (rffl)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
119410779 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
Prok-RING_4
zf-RING_5
NMD3
MUG2_C
FYVE
FYVE_2
Phage_lysis
SDE2_2C
Motif
Other DBs
NCBI-GeneID:
119410779
NCBI-ProteinID:
XP_037533625
LinkDB
All DBs
Position
6:46128135..46133746
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AA seq
333 aa
AA seq
DB search
MFTSCCNWLCMDSVDVDRSGGSDRHHRSYTNSGFSTQPSPPEHTCKACGGSFDTPARKHM
CVDCKKNYCSHCSAQQELRPRLCHTCQRFYGNLLERAELMKLKVKELRDYLHLHEVSTHL
CREKEELVELILTQQSSPSSSSAPDTPIVDTPTMTSDPPVNAFISTPPTPEPEVPAPALE
TLQPEPDLQDEDQNWDPEEAPVSGRRASLSDLNSVDDIEALSVRQLKEILARNFVNYKGC
CEKWELMERVTRLYQDQQNLLAASSASAEDGTGTGRTATSPEENLCKICMDSPIDCVLLE
CGHMVTCTKCGKRMSECPICRQYVIRAVHVFRS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtttacttcgtgctgtaactggttgtgtatggactcagtggatgtggaccggtccggt
gggtccgaccgacaccatcggtcctacaccaactcgggcttcagcactcagccatctccg
cccgaacacacctgtaaggcctgcgggggctctttcgacacacctgccaggaagcacatg
tgtgtggactgtaagaaaaactactgcagccattgctccgcccagcaggagctccgcccc
cgcctctgtcacacttgtcagcgtttctatgggaacctgctggagagggcggagcttatg
aagctaaaggtaaaggaactgagggactacctgcatctgcacgaggtctccacgcacctg
tgcagagagaaggaggagctggtggagctgatcctgactcagcagtcctcaccttccagt
agctccgcccccgacaccccgattgttgacactcccacaatgacctctgaccctcctgtc
aacgcgttcatctcgaccccgcccactccagagccagaagttccagccccagccttggaa
acactgcagcccgagccagacctgcaggatgaagaccagaactgggacccggaggaggcc
ccggtctcgggacgcagagcctcgctgtcagacctgaacagcgtggatgatatcgaggca
ctcagcgttcggcaactgaaggaaatcctggcccggaacttcgtcaactacaaaggctgc
tgtgagaaatgggagctgatggagagagtgacccggctgtaccaggaccagcagaacctg
ctggctgccagctctgcgagcgctgaggacggaaccggcaccggcagaacggcaacgagc
ccagaggagaacctgtgtaagatctgcatggactcgcccatcgactgcgtgctgctggag
tgcggtcacatggtcacctgcaccaagtgtggcaagaggatgagcgagtgtcccatctgc
cggcagtacgtcatccgggccgtgcacgtcttcaggtcctga
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integrated database retrieval system
