Nematolebias whitei (Rio pearlfish): 119410788
Help
Entry
119410788 CDS
T08042
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04137
Mitophagy - animal
nwh04140
Autophagy - animal
nwh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119410788 (hif1al)
04137 Mitophagy - animal
119410788 (hif1al)
04148 Efferocytosis
119410788 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119410788 (hif1al)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119410788 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
119410788
NCBI-ProteinID:
XP_037533633
LinkDB
All DBs
Position
6:46928995..46943847
Genome browser
AA seq
657 aa
AA seq
DB search
MEKENETVAVKKSSSEQRKLRSRDAARCRRSQETEVFYELARTLPLPRKVCTHLDKAGIM
RVTLSFLRLQQLLRPEGDEEDEAQDEDPMDAFFPEALAGFVMVVTEEGDMIFLTENVNKH
IGIAQLDLLGQSVYDFVHPCDQEELRDLLTPRPGLCKKLQAEQTSERNFFLRMKSTLTSR
GRTVNIKSANWKVLHCTGHIRPSAAPPAARVMTLLCEPIPHPSSVEFPLDTCTFLTRHSM
DLIFTHCEGRVTELVGYKPEDLIGRSACEFYHALDSERIRRSLQTLLSKGQVNTSHYRFL
ANCGGYVWAETQATVLYNNKTSQPEAIVCLNFILSAVEQPDVVFSAEQTRCSCVTKTEPR
SPDHAPEDSGISTCESDAENVAGSSESEDVDPSSPAELLLKLKENPEELLQLAPEAEDAA
VLLAASPVELSFASPPSPSLVPEDPKDLCTPELRKLLAPIFDSIDPSSSPCTSPEPAQSS
CNVEVMDTSEVEKFFTFCPEDTQKKLESLQDSEDMDLEMLAPYISMDDDFQLTFLSARPE
DADKPPSFSFKRSDVSRKRTRGDDVSPQLTVQDKRQKPDPSSIEEELLLSHSLLDTLEEA
DQSDLVLDLDSERRSQLLTDRDPVLGGVQELCDTAALMRNVFAPRTADLSPPLSPLT
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaaaacgagactgtggcggttaaaaagagcagctcggagcagaggaagctc
cgctcccgtgacgcggcccgatgtcggcgcagccaggaaacggaggtgttttatgagctc
gcccgcaccttgccgctgccgcgcaaagtctgcacccacctggacaaagccggcatcatg
agggtgacgctcagcttcctgcgactgcagcaactcctgcggcccgaaggagatgaggaa
gacgaggcgcaggatgaagatccgatggacgccttcttccccgaggcgctggccggtttc
gtcatggtggtgactgaggagggggacatgatcttcctgacggaaaacgtcaacaaacac
atcggcatcgctcagctggacctgctgggtcagagtgtttacgactttgttcatccctgc
gatcaggaggagctcagagatctgctgactccacgtccaggtctttgtaagaagcttcag
gccgaacagacgagcgagaggaacttcttcctgcgaatgaagagcacgctgaccagcagg
gggcgcaccgtcaacatcaagtctgccaactggaaggtgctccactgcacgggtcacatc
cgtccctcagcggccccccccgcggcccgagtgatgacgctgctgtgcgagcccatccct
cacccctccagcgtggagtttcctctggacacgtgcacgttcctgacccgccacagcatg
gatctgatcttcacacactgcgagggaagggtcacggagctggtcggatacaaacccgag
gacctgattggacgctcggcctgcgagttttaccacgccctggactcggagcgcatcagg
aggagtctgcaaacgttgctctccaaaggtcaggtgaacaccagccactatcgcttcctg
gcgaactgcggcggctacgtctgggcggagacgcaggcgaccgtcctctacaacaacaag
acgtcgcagcctgaagccatcgtctgcctcaacttcatcctcagtgctgtggagcagccg
gacgtggttttctctgctgagcagacccgctgcagctgcgtgacgaagaccgaaccccgc
tcgccggaccacgcgcctgaggacagtgggatctccacctgcgagtccgacgccgagaat
gtcgctggttcctctgaatctgaagatgtggatcccagcagccccgctgagctcctcctg
aagctgaaggagaatccggaggagcttctgcagttggctcctgaagccgaagacgccgcg
gtgctgctagcagccagtccagtcgagctgtcgtttgccagtcctcccagtccttcgttg
gtaccggaggatcctaaagacctgtgcaccccagagctgaggaagctcctcgcacccatc
tttgactccatcgacccctcgtcgtctccgtgcacctctccagagccagcgcagagctcc
tgtaacgtggaggtgatggacaccagcgaggtggagaagttcttcactttctgtccagaa
gatactcagaagaaactggaatcgctgcaggactcggaggacatggatctggagatgctg
gctccttacatctccatggacgacgacttccagctgaccttcctcagcgctcggcccgag
gacgccgacaaacctccgtccttctcgtttaaacgctctgacgtgagcagaaaacggact
cgaggcgacgacgtgtcccctcagctgacggttcaggacaagagacagaaaccagacccg
tcctccatcgaagaagaactcctcctcagccacagtctgctggacactctggaggaagcg
gaccagtcggacctggttctggacctggactctgagcggcgcagccagctgctcacagac
agagaccctgttctgggaggcgttcaggaactgtgcgacaccgcagctctgatgaggaac
gtgttcgcccctcgcaccgctgacctctcaccgcccctctcacctttgacctga
DBGET
integrated database retrieval system
