Nematolebias whitei (Rio pearlfish): 119410826
Help
Entry
119410826 CDS
T08042
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119410826 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119410826 (polr1b)
Enzymes [BR:
nwh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119410826 (polr1b)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119410826 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
119410826
NCBI-ProteinID:
XP_037533679
LinkDB
All DBs
Position
1:complement(45288820..45297527)
Genome browser
AA seq
1134 aa
AA seq
DB search
MDFSEKWSRLPAGPSLKNLTDGGFGKLQDKQHPAVQDLTKAHLESFDQAVTDGLSRVVQA
IPPLEFLSKSDQVSLSFVDATIHSPAVGKGSICSEMKVFPAECRGRRCTYRGKLVADVSW
SINGVPKGIIKQSLGQLPVMVKSQLCNLHGMSPQELVRHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMRCVREEHTAINMNLHYLENGTVMMNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKTCVSEMLRLVAEEGCTTRSKV
LEYLGEHFRIKLNLPEWYTNEQCASVLLNECICIHLKSDSDKFYLLCLMTRKLFSYAKQE
CMEENPDSITCHEVLTPGQLYLMFLKERLTAWLVSVKLSFNKRGSKVTGSWSTENMIRML
NLGSDVTKSFEYLLATGNLHSKTGLGMLQSSGLCVVADKLNFIRYLSHFRCVHRGASFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAPTAFTTSLPALLCALGVT
PVDGSPGRAFSECYPVVLDGAVVGWVESDLAPTVVDSLRRFKVLGEKKIPPWTEIVLVPR
TGKASLYPGLFLFTTPCRMMRPVQNLAHGKQELIGTFEQLYMNVGIMAGEVEAGVTSHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFKDRSDNKLYRLQTPQSP
LVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LADKVRGEDCVVFGTKAGDPKVDGKLDSDGLPHIGSVLQYGDPFYGYINLNTGQTQVSYY
KSQEACVVDNVKICSNDSGSGSLKRVCITVRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLSHDATPFTFSEESSALEY
FGKMLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGVRDKV
TNQPMGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPYWSAMRHRKTTCTLCGKSDSIVSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacttttcagagaagtggagtcgtttaccagccggaccgagcctgaagaacctgacg
gacggagggttcggtaaactgcaggacaagcagcacccggcggtccaggacctgaccaaa
gcccacctggagtccttcgaccaggcggtcactgacggtctcagccgggtcgtgcaggcc
atccctcctctagagttcctgtctaaaagcgaccaggtgagcctgtccttcgtggacgcc
accatccacagcccagctgtggggaagggcagcatctgctctgagatgaaggtgtttcct
gccgagtgtcgagggcggaggtgcacctacagagggaagctggtggcagacgtcagctgg
tcgatcaacggggttcctaaaggcatcatcaagcagagcctgggtcagctgccggtcatg
gtcaagtcccagctgtgcaacctgcacggcatgtccccccaggagctcgtccggcatcac
gaagaagctgaggaaatgggaggttacttcatcgtgaacgggatagagaaggtgatcagg
atgctgatcatgcccaggaggaattatcccatcgccatgtcccgacccaagtggaagagc
cggggtcagggctacactcagtacggtatttccatgcgttgtgtgagggaggagcacacg
gcaatcaacatgaaccttcattacctggaaaacgggacggtgatgatgaacttcatctac
cagaaggagctcttcttcctccctttaggctttgcactgaaggctctggtggacttcaca
gacttccagatctaccaggagctgatcaaaggccgcgaggacaattctttctataagacc
tgcgtgtcggagatgctgcgcctcgtggcggaggagggctgcacgacccgcagcaaggtg
ctggagtacctgggggagcacttcaggatcaagttgaacctgcctgagtggtacacgaac
gagcagtgcgccagcgtcctcctgaacgaatgcatctgtatccacctgaagtccgactcg
gataagttctacctgctttgtctcatgacccggaagctcttcagctacgccaagcaggag
tgcatggaggagaaccccgacagcatcacgtgtcatgaagtgctgaccccgggtcagctc
tacctcatgttcctgaaggagcgcctgacggcgtggctggtgtccgtgaagctgtccttc
aacaaacgaggatccaaagtgactggcagctggagcacagagaacatgataaggatgctg
aacctgggctcagacgtgaccaaatctttcgaatacctgctggccaccggaaacctccac
tccaagaccggtctcgggatgctgcagagcagcggtctgtgcgttgttgcagacaaactg
aacttcatccggtacctttcccatttccgctgcgtgcaccgaggagcctccttcgccaag
atgaggaccacctccgtccggaagctgctgcccgagtcctggggcttcctgtgtcccgtt
cacactccggacggagagccgtgcggactcatgaaccacatgaccgccagctgcgagata
gttgcacccaccgccttcactacgtccctgccggctctgctctgcgccctcggtgtgacc
ccggtggacggatcccccggtcgagccttttctgagtgctaccctgtggttctggacggc
gccgttgtcggctgggtggagagcgatttggctccaacggtggttgactcgctgcgcagg
ttcaaggtgctcggggaaaagaaaattcctccgtggacggagatcgtgcttgttcccaga
acgggcaaagccagcttgtatccgggcctgttcctgttcacgacgccgtgccggatgatg
cgacccgttcagaacttggcccacggcaaacaggagctgatcggcaccttcgaacagctc
tacatgaacgtggggatcatggcgggtgaggtcgaagccggcgtgacctcgcaccaggag
ctgttccctcacagcatgctcagtgtggtggccaacttcatcccctactcggaccacaac
cagagccccagaaacatgtaccagtgccagatgggtaagcagacgatggggtttcctctg
cactcgttcaaggatcgctccgataacaagctgtaccggctccagaccccccagagtccg
ctggtcaggccctacatgtacgaccattacaacttggacaactaccccagcggcaccaat
gccatcgtggccgtcatctcctacaccggctacgacatggaagacgccatgatcgtgaac
aagtcatcgtgggaaagaggttttgcccatggaagcatctacaagaccgagttggtggac
ttggcggacaaggtgagaggagaggactgcgtggtgtttgggactaaggccggagacccg
aaggtggacgggaaactggattctgacggactgcctcacatcggatcggtgcttcaatac
ggagacccgttctacggctacatcaacctgaacacgggccaaacccaagtcagctactac
aagagccaggaggcctgtgttgtcgacaacgtaaagatctgcagcaacgactcgggatca
ggcagtttgaaacgcgtctgcatcacggttcgggtgccacgaaaccccaccatcggcgac
aagtttgccagccgccacggtcagaagggcatcctgagccgcctctggccggcggaggac
atgccgttcacggagagcggcatgtctccggacatcctcttcaacccccacggcttcccc
tcccggatgacgatcgggatgctgatcgagagcatggcgggaaagtccgccgccctgcac
ggcctgagccacgacgccacgcctttcaccttctctgaggagagctcggcgctcgagtac
tttggtaaaatgctccgagccggcggctacaactactatgggacggagcggctctacagc
gggctgagtggccaggagctggaggcggacatcttcatcggcgtcgtctactaccagcgg
ctgcgccacatggtctccgacaagttccaggtgcgaaccaccggagtgcgagacaaggtg
accaaccagcccatgggcggcaggaacatccagggaggcattcgttttggggagatggag
cgagacgccctgctggcccacggctcttcgttcctgctccacgaccgcctgttcaactgt
tccgaccgctcggtggctcaagtgtgcgtggactgcggcagccttctgtccccgctgctg
gagaaaccgcccccctactggtcggccatgcgccaccggaagaccacgtgcactctgtgc
ggcaagagcgactccatcgtctcggtgtccgtcccgtacgtctttcgctactttgtggcc
gagctcgcggcgatgaacatcaaagtcaagttggacgttaagtga
DBGET
integrated database retrieval system
