Nematolebias whitei (Rio pearlfish): 119410985
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Entry
119410985 CDS
T08042
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119410985
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
119410985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
FXa_inhibition
EGF_3
Plasmod_Pvs28
hEGF
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
119410985
NCBI-ProteinID:
XP_037533832
LinkDB
All DBs
Position
6:complement(45586166..45630145)
Genome browser
AA seq
1826 aa
AA seq
DB search
MRICLLWISWTLWFCSGALQHPQREEGDLEPGGRREEVRFRPGRLAALLGPGDRVKFGTR
RAAHSGPGVCGDRCCVQRTLSPGPGETRRSSKPRCSHADRCPLTNRCVCRQRFHGNRCMK
LPVGERRATAPPVVTALPPSSTTTTEPVKTCIRPEPAESDPNPSSIEDKDLMITDSGTVK
SENPEAETENIKLNRGVSMKENRASLEHLGVTSTDSDMEEQRTASEHVILDPDPGSKREN
KTRSIPESLKLNLGLKEDERWTSGTRTWEKKKNQILSLREAQSVLLRKTSSLGGRGVSIA
AFLMKHILREKRKLHILTSSSSPLLIKFSLKTFHTRRGQGPVQLAARTANGQTGGRGTER
FQVTFTPTICKVLCSQDRCVNHCERGNVTTLYSEGGGGGGGRRDSAHGPGFRVFLCPLLC
KNGGVCLQKDRCFCPKNFTGKFCQIPASPSASSNQISRPALLATAAANQELMRSEFLLPL
GQNQEALQESSSPMVKVRVQHPPEASVKIHQVMKVSGSGPALQTSSSSSSGSAGAPAPSP
VLAGGGVQAQILSGVSTYNHQSGFRYCFREVKDGQCSSPLPGLRSRETCCRGTGKAWGLT
DCVLCPENSGQTNGSCPVGFERSNGSQCVDVNECHQQGLCENGLCVNTRGSFSCVCRLGF
ILDATHGICISHSVISEEKGQCYRILGSGLGPSSCSMPIFRNITKQICCCSRVGKAWGPE
CQKCPYFGSAAFKEICPAGPGYHYSASTLQFTQRADPAGRGPLLTSQDSRDSEPGSSSTR
TSSSQQKLSPGSSAGTRPAQPKPEVRLPSQPPLSSSRTFQPSGSTISTSHQNRVDSAQTN
SRSTDSRGAPTSSGSRSDPVAPRGDSASAPAQRGSRPDLARPHVSPTTRPTRVQVVQGVC
ESRPGVCGRGLCVDLPRGNHTCKCDQGFQLNTQRQHCHDIDECQQNPCSNARCENTPGSY
RCVCRHGYRLIGNTCSDVDECVDSLQCPGQECINTQGSFRCESCQPGFGLLNRLCTDIDE
CRRSPCPNGRCENTPGSYRCVCRHGYKLQNNTCTDVDECAEPSQCPGQMCVNSVGSYSCV
SCRPGYTLTNRQCTDVDECVNIGACEADQVCVNTVGSFRCDCGPGYRRSGLGRQCRDVNE
CLEGDFCFSRGECVNTPGSYMCVCSPGFTLSDNRTACLDVDECVRSGVCSDGRCVNTEGS
FQCECRSGFASNPEKNACLDVDECVSSSGSVCGSQRCENTIGSYRCLVSCEPGYQVSADG
RCVGEPEPLNVTADHDSPFLFVSPQTETLPGSPHTSFSSSGSSTSSFTSSSFLVSMVDVA
PVLPPLPVARPGEVRECYYNLADQGTCSLLATNTSQQECCCTVGEGWGLGCQYNTCPPVD
TAEFLSLCPSGRGYITAGPGAFSYRDVDECKRFHPEVCKNGVCVNNIPGYSCYCSSGYVY
NSMMLECVDHDECEEESCVGGLCVNTVGSYYCSCLPPLVLDDTQRNCVNASHLTIDENLS
VCWQHVTADLLCQSPLLGAQVTFIDCCCFYGEGWGMGCALCPATDSEDYASLCSSFSAPV
FPERFPESAGSETGAGHGGASPPYSRDFLPPELAPSRDFGRPDYDDYSPAGGSRSSFRGR
TGLPDETYQGPEFSTSYYSEGDYGSPDSSHRRPPSFGLPPDSRSELGFGTRSDLPALNLA
PLPGSPYEVQEEEEEEERTWRPGPRFPSFTDRSRGGAGGGGAPRRVYERRYDTYAGLNAA
EDCGILHGCENGRCIRVSEGYTCDCYQGYVLDTTSMTCVDLNECEDSVGLQFPCVNARCV
NTEGSFRCVCRRGYVTSRRPNHCVAV
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgcggatctgtctcctgtggatcagctggaccctgtggttctgcagcggagctctgcag
catcctcagcgggaggagggagacctggagcccggcgggcggagggaggaggtccggttc
agacccggcagacttgcagctctcctgggaccgggggaccgggtgaagttcgggacccgg
agagcagctcatagtggtcctggtgtctgtggagaccggtgttgtgtccaaagaactctg
tctcctggaccaggagaaaccagaagaagctccaaacccagatgttctcatgcagacaga
tgtccactgaccaacagatgtgtctgtagacagcgtttccatggtaaccgctgcatgaaa
cttcctgttggagagcgccgtgcgacggctccaccagtcgtgactgctctacctccttct
tccaccaccacaacagaaccagtcaagacctgcatcagacctgaacctgcagagtcagat
ccaaacccgtcatccatagaagacaaggacctcatgattacagactctggcaccgtcaaa
tctgaaaatcctgaagctgagactgaaaacatcaagttgaacagaggtgtgtccatgaag
gagaaccgagcctccttagaacatctgggagtgacgagtactgactcagatatggaggag
caaagaacagcctctgagcacgtgattctggacccagatcctggatctaaaagagaaaac
aagactcgatccattcctgagtccctgaaactgaatctaggactgaaagaggatgaacgt
tggacaagtgggacaaggacgtgggagaagaagaagaaccagatactgagtctgagggaa
gctcagtcagtcctgctgaggaagacttcatcactgggaggaagaggagtcagcattgcc
gccttcttgatgaagcacattctaagagagaagaggaagcttcacattctgacctcctct
tcatctcctttgttgataaaattcagcctgaagactttccacaccaggaggggtcagggc
ccggtccaacttgctgctcgcacagctaacggacagacgggaggaagaggaacagagagg
ttccaggtgacgttcacgccgaccatctgtaaggtgctctgcagccaggaccggtgtgtc
aaccactgcgagagagggaacgtcaccacgctgtacagcgaaggaggaggaggaggagga
ggaaggagagacagcgcccatggaccgggtttcagagtcttcctctgcccgctgctctgt
aagaacggaggcgtctgtctgcagaaagatcgctgcttctgtcccaaaaacttcaccgga
aagttctgccaaattcccgcctcaccttccgcctcctccaatcagatcagcagacccgcc
ctcctcgccaccgcagcagccaatcaggagctgatgaggtcagagttcctgcttccgttg
ggtcagaaccaggaggcgctgcaggaatccagctcccccatggtgaaggtcagagttcag
cacccgcctgaggccagcgtgaagatccaccaggtgatgaaggtgtctggttctggtcct
gccctgcagaccagttcttcctcctcttcgggttcggccggagctccggccccatcgccg
gttctcgcaggtggtggagtccaggcccagatcctgagcggtgtcagtacctacaaccac
cagtcgggcttcagatattgtttcagagaggtgaaagacggacagtgcagttccccactc
cctggtctgcggagcagagaaacctgctgtcgggggacagggaaggcgtggggactcact
gattgtgtcctctgtcctgaaaactcaggtcagaccaacggcagttgtccggttgggttc
gagcgatccaacgggtctcagtgtgtcgatgtgaatgagtgccaccagcaggggctctgt
gagaacggcctctgtgtgaacaccagggggagctttagctgtgtgtgtcgcttggggttc
atcctcgatgccacacatggaatctgcatctcccacagtgtgatatcggaggagaagggt
cagtgttaccggatcctcggttctggtctgggtccgtcttcttgctccatgcccatcttc
cggaacatcaccaagcagatctgctgctgcagccgtgtcgggaaggcctggggacccgag
tgccagaagtgcccttactttgggtcagctgcctttaaggagatctgtcccgccgggccc
gggtaccattactcagcttccactctgcagttcactcagagagccgacccggcgggccga
ggcccgctgctgacatcacaggacagcagagattctgaacccgggtccagcagcaccaga
acctccagttcccagcagaaactgtcccctggttcatcagcaggtaccagacccgctcag
cctaagccggaggtccgacttccgtcacagcctccgctcagctcctccagaacatttcaa
ccttctgggtccacaatctcaacctcccatcagaaccgggtcgactcagcacaaacaaac
tctcggtccactgacagccgaggtgctccgacatcctccgggtcccgatccgatccagtc
gcacctcgaggcgactctgcctcggctccggcccaacgtggatccagacctgacttagcc
cggcctcatgtgagcccgacgacccgacccaccagagtccaggtggttcaaggtgtgtgt
gagagcagaccaggtgtatgtgggcgtggcctgtgcgtggatctgccacgtgggaatcac
acctgtaagtgtgatcaaggtttccaactcaacactcagcgacaacactgtcacgatatc
gatgagtgtcagcagaacccctgcagcaacgctcgctgtgagaacacacctggcagctac
aggtgtgtttgtcgccatggttacagactcatcggcaacacctgctcagatgtggacgag
tgtgtggattctctgcagtgtcctggtcaggagtgtatcaacactcagggttcgtttcgt
tgtgagtcctgccagccgggattcggacttctcaacaggctctgcacagacattgatgag
tgccgtcggtctccttgccccaatggtcgctgtgaaaacacacctggcagttaccgctgt
gtctgtcgccatggttacaagctccaaaacaacacctgcacagatgtagacgaatgcgca
gagccgtctcagtgtcctgggcagatgtgtgtgaactctgtggggtcctacagttgtgtg
tcctgtcgtcctggctacacactgaccaacagacagtgtacagatgtagacgagtgtgtg
aacatcggagcctgtgaagcagatcaggtgtgcgtgaacacagtcgggtcgttccggtgc
gactgtggtcccgggtatcgacgctccggcctggggaggcagtgccgagacgttaacgag
tgtttggagggagacttctgtttctccaggggagagtgtgtgaacacgcctggatcatac
atgtgcgtgtgttcacctggattcacgctcagcgacaaccggacggcctgcctcgacgtg
gacgagtgtgtgaggtcaggggtgtgttcagacggccgctgtgtgaacactgaaggttcg
tttcagtgcgagtgtagaagcggcttcgccagcaaccctgagaagaacgcctgcctcgat
gttgatgagtgcgtctcctcgagtggttcggtttgtgggtcacagcgatgtgagaatacg
atcggctcataccgctgcctcgtgagttgtgagccaggttatcaggtgtcagcggacggc
cgctgcgtaggtgagccagagcccctgaatgtcaccgcagaccatgactctccgtttctt
tttgtttctccacaaacagaaacacttcctggctccccacacacctccttttcttcttca
ggttcttccacaagttctttcacctcctcctccttccttgtcagcatggtggatgttgct
ccggtgctgcccccacttcctgtggcacgtcctggggaggtcagggagtgttactacaac
ctggctgaccagggaacctgcagcctgctggccaccaacactagccagcaggagtgttgc
tgcactgtgggggagggttggggcctgggctgccagtacaacacctgcccacctgtagac
acagccgagtttctatctctgtgtcccagcgggagaggatacatcacagcaggaccagga
gctttcagctacagagacgtggatgagtgtaaacgtttccatccagaggtctgtaagaac
ggagtgtgtgtgaacaacatccccgggtacagctgctactgctccagtggatatgtttac
aacagcatgatgctggagtgtgtcgatcatgatgagtgtgaggaggaaagttgtgttgga
ggcctttgtgtcaacacagtgggttcatattactgcagctgtttgcctccgttggtgctc
gacgacactcagagaaactgtgtcaacgcgtcccacctcaccatagatgagaatctgtct
gtgtgctggcagcacgtcaccgcagacctgctgtgtcagagtcctctgctcggagctcag
gtcacgttcatcgactgctgctgtttttatggggagggttgggggatgggctgtgccctc
tgccccgccaccgactccgaggactatgcgtcgctgtgcagctccttttctgctcctgtg
ttcccggagcgttttccagagtctgctggatcagaaactggagcaggtcacggcggcgcc
agtcccccctacagtcgggacttcctccctccagagttggctcccagcagagacttcggt
cgtcctgattacgatgattactctccagcagggggcagcaggtccagcttcaggggcagg
accggtctgcctgatgaaacctatcaaggacccgagttcagcaccagttattactctgaa
ggagactacggctcccccgacagctcccatcgcaggcctccatcttttggcctcccgccg
gactcccgatctgagctcgggtttgggacccggtctgacttacctgctctgaacctggct
ccgctgcccggatctccctacgaggttcaggaggaagaggaggaggaggagaggacgtgg
agaccaggtccaaggtttccctccttcactgaccggagcagaggaggagcaggaggagga
ggcgcaccacggagggtgtacgagaggcgttacgacacgtatgccggcctgaacgcagca
gaggattgtgggatactccacggctgtgagaacggcaggtgtatccgtgtctcggagggt
tacacctgcgactgttaccaaggatacgtgctggacacgacctccatgacctgcgtcgat
ctaaatgagtgtgaggacagtgtgggcctgcagttcccgtgtgtgaacgctcgctgtgtg
aacaccgaaggatcgtttcgctgcgtctgcaggagaggatacgtcacgtcccgcagaccc
aaccactgcgtcgctgtctag
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