Nematolebias whitei (Rio pearlfish): 119411318
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Entry
119411318 CDS
T08042
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03040
Spliceosome
nwh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119411318 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119411318 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119411318 (srsf1a)
Spliceosome [BR:
nwh03041
]
Common components
Common spliceosomal components
SR proteins
119411318 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Transformer
Motif
Other DBs
NCBI-GeneID:
119411318
NCBI-ProteinID:
XP_037534185
LinkDB
All DBs
Position
6:38045763..38049769
Genome browser
AA seq
247 aa
AA seq
DB search
MSGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFE
DPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSRGGGYGGAGGGAPRGRYGPPSRRSEYR
VVVSGLPQSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS
HEGETAYIRVKLDGPRSPSYGRSHSRSHGSRSRSRSRSASRSRSNSRGRGRGSPRYSPRH
SRSRSRS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgttgttcgaggccccgccgggaataacgattgccgaatctacgtggggaat
cttccccccgatatccgcaccaaagatgtcgaggacgtgttctacaagtatgggacgatt
cgagacatcgacctgaagaaccggagagggggtccgcctttcgccttcatcgagttcgaa
gacccgagggacgccgacgacgcggtctacggacgcgacggctacgactacgacggctac
aggctgcgtgtggagttcccgcggagcggcagaggctccagaggcggcggctacgggggg
gccggtggtggagcccccaggggtagatatggacccccgtccaggcgctccgagtacagg
gtcgttgtttcaggtcttcctcagagtggcagctggcaggacctgaaggaccacatgcgt
gaggccggcgacgtgtgctacgcagacgtctacagagatggaactggagtcgtagagttt
gtccgcaaagaggacatgacctatgccgttcgaaaactggacaacaccaaattccgttcg
catgagggagagactgcttacattcgtgtgaaattagacggtccccgcagcccaagttac
ggaagatcgcactcccgcagccatggcagcaggagccgaagccgcagtcgcagcgccagc
cgcagtcgcagcaattcccgtggtcgtggcagaggatctccccgctactcgcctcgtcac
agccgctctcgttctcgttcctaa
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integrated database retrieval system
