Nematolebias whitei (Rio pearlfish): 119411346
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Entry
119411346 CDS
T08042
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119411346 (trpc4b)
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119411346 (trpc4b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
119411346
NCBI-ProteinID:
XP_037534217
LinkDB
All DBs
Position
6:complement(40434627..40444694)
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AA seq
929 aa
AA seq
DB search
MSQLYYKKADSSSYRDRIALRIVRAEAELSPMEKAYLGAVDNGDYASVKQALEESEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSYNIHVGDALLHAIRKEVVGAVELLLNHKR
PRGEKQVPPILLDRQFSDFTPDITPIILAAHTNNYEIIKLLLQRGVSIPQPHAVRCNCVE
CMFSPDVDSLRLSRSRLNIYKALASPSLIALSSEDPFLTAFKLSWELKELSSLENEFKSE
YEELSQTCKQFAKDLLDQTRSSRELQIILNYRDDIDPLLDENINDLARLKLAIKYCQKEF
VAQPNCQQLLASRWYDEFPSWRRRHWAVKFITSICIGILFPLLSIFYLICPKSRYGLSIR
KPFIKFICHTASYLTFLFMLFLASQHINTQDPDNPAANFQGPAPTTVEWIILPWVIGFIW
TEIKQMWDSGFKDYIDDWWNIMDFVMNSLYIATISLKIVAYIKFRGCKPREEWETWHPTL
MAEALFSIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGIN
QLYFYYATDGVNNCTGIRCLTQNNAFSTLFETLQSLFWSVFGLISLYVTNVKPDHEFTEF
VGTTMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLSS
PFNIIPSPKSIYYLFRWIKRFVFRRPGKQRLDSFETLGFRAAENVRLKHEYQEVLKNIVK
RYVAAKIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGNPHSAAKSRVSSFTFAYPG
NSFKYCPKLSTDESQQEPNLLSVAATTLQSEATNATSSESSDKPTNGSLVLCVTEKTQNE
ISEDVSSAGCSQRRRKHSSQKFDEICSLLKEDILKSGSQNQDQLLGENVDVEVSQKVNAG
VQEMWRSYTVSYKEAKNGPKKSKSKSASE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagttgtattacaagaaagctgacagctcctcgtacagagaccgcatcgccctg
cggattgtgcgcgcagaagctgagctctctcccatggagaaagcatacctgggggccgtt
gacaatggggactacgcaagtgtaaagcaagccctggaggagtctgaaatctacttcaga
attaatatcaactgcattgatccacttggacgcacagccctccttattgccattgaaaac
gagaacttggagatcatagagcttctgctgagctacaacatccatgtgggtgatgccctc
ctgcacgccattcgtaaagaagtggtgggggccgtggagctgctgctcaaccacaagaga
ccaaggggggaaaaacaggtgcccccgattctactggacagacagttttcagacttcacc
ccagatatcactccaatcatcctggcagctcacacaaacaactacgaaataatcaaactg
ctcctgcagcgaggtgtttccatacctcagccgcacgctgtgcggtgcaactgtgtggag
tgcatgttcagtccagacgtggacagcctgcgtctctcccgctcgcggctcaacatctac
aaggccctcgccagcccgtctctcattgccctctccagtgaagatccattcctcacagct
tttaaactcagctgggagctgaaggagctcagctcactggagaatgagtttaagtctgaa
tatgaggagctatctcaaacgtgtaagcagtttgccaaggacctgttggaccagactcga
agctctagagagctgcaaataatcctcaactaccgcgatgacatcgaccctctgctggat
gaaaacatcaatgatctggcccggctgaagctggctatcaaatattgccagaaagagttt
gttgctcagcccaactgccagcagcttctggcgtctcggtggtatgatgaattcccaagt
tggaggaggcgtcactgggcagtgaagtttataaccagcatctgtattggcatcctcttt
ccattgttatccatcttctacttgatatgtccaaaaagtcgctatggcctgtccatccgt
aagcctttcatcaagttcatctgtcacactgcttcctatctgaccttcctcttcatgctc
ttcttggcctctcagcatattaacactcaagacccagataatcccgctgcaaacttccag
ggcccggcacccactactgtggaatggattatcctgccttgggttattggttttatttgg
actgagatcaaacaaatgtgggatagtggttttaaggactacatagacgattggtggaac
ataatggacttcgtaatgaactcactgtacatcgcaaccatttcactcaagattgttgca
tacatcaagttcagagggtgcaaacccagagaagagtgggaaacatggcacccaaccttg
atggcagaagccttgttttccatcgcaaacatcttcagctccttacgcctcatcagtctt
ttcactgccaactcccacctgggccctttacagatttcattgggccgtatgcttttggat
atcctcaagttcctcttcatctactgtctagtccttctggcttttgctaacggcatcaat
cagctctacttttattatgccacagatggtgtgaacaattgcacgggcattcgctgtctc
acacagaacaatgccttttcaacgttgtttgaaacactgcagtcattattctggtctgtg
tttggactgatcagcctgtatgtgaccaatgtaaagccagaccatgaattcacagagttt
gtgggcaccactatgtttggcacctacaatatcatctccttggtggtacttctgaacatg
cttatcgcaatgatgaacaactcctaccagcacattgctgatcatgcagacatagaatgg
aaatttgcaagaacaaaactttggatgagttattttgaagaagggggaaccctatcatct
ccattcaacataattcccagtccaaagtcaatttattatctgtttagatggataaaaaga
tttgtgtttaggagaccaggcaaacaaagactcgactcatttgagactttggggtttcgt
gcagcagaaaatgtccgcttaaaacacgagtatcaggaggttttaaagaacattgtgaag
cggtatgtggctgcaaagatcagagatgccaaaaccgaagaaggattgactgaagaaaac
ttcaaggagctcaaacaagatatttccagcttccgctatgaagttctgggaatgatgaag
ggcaatcctcactctgctgccaaaagtcgagtttcaagtttcacgtttgcgtaccctgga
aactccttcaaatattgtcccaaactttcaacagatgagtctcaacaagagccaaacctg
ctcagtgtggctgccaccaccctgcaaagtgaagctaccaacgccaccagctctgagagc
tcagataagccaaccaatggttcacttgttttgtgtgtcacagaaaagacacagaacgaa
atatctgaagatgtatcaagcgcgggatgctcccagagacggaggaaacactcttctcag
aagtttgatgaaatatgctccttgttaaaggaggatattttaaaatctggaagccaaaac
caagatcagcttctgggtgaaaacgtggatgtagaagtttcacagaaagtgaatgcaggc
gttcaggaaatgtggcgttcctataccgtctcttataaggaagcaaaaaatgggccaaag
aaaagtaaaagtaaatcagcgagtgagtaa
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