Nematolebias whitei (Rio pearlfish): 119411370
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Entry
119411370 CDS
T08042
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119411370
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119411370
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
zf-TRAF
F-box
Motif
Other DBs
NCBI-GeneID:
119411370
NCBI-ProteinID:
XP_037534241
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All DBs
Position
6:43122780..43129164
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AA seq
680 aa
AA seq
DB search
MAAGRHDHCDKCYNLHCQVPVQTSFSCTVITCYRNCGATFHMCKHDEHLLLCPNEMVPCL
NVDYGCPLTMLRHKLAKHLEVCPASIVCCSQEWNRWPVPDTDMTFYANISESLQLNTEPG
LDVALALRDQALLFQSIKMRNVFPELTEEEPAPQNHPIGTIGAAEEGASCRDCCGFAENA
CVKTEEKELSQKERSALAKSSDVASFQSSSQWEKIFQKEKEGCNLTVKKLNRDGKGKGME
ERNITKSEGGRRNPDPGEENAGAARNMNGATGLAPWQDGVLERLGKEVNIAEYNMYLVHN
GAMLINFGQLAACTPREKDFVYGNLEPIEVKTVRSFNVPTSYRAKRSHLKDPSHKAKTEH
QNVGTDLGMSAEDLPKSEEVGSTLLCSMEKELKGHLISESSSTDGIYVDIGTQTYIFSFA
PFKADASLADVIAGKPRGLYVCTESESVTRRHNKISSAFSFMCGHFFRRAEYHSHFRNVH
CDIQASVNGWFQQRCPLAYLGCTFTQIRFHPEGQQATIKFCQDASAFKLLPHFPTSLCDN
VKSFIPQGSANDCDALSRLPMEILQHIAGYLDSLTLSQLLQVSCLMREVCATLLQERGMV
FLEWKKKTYKHGGSSWKCRKKVWKFSSLFSPVNRWSFSNAPSMSEHLRTCTFYQKEERRE
PVALTCLGEVRNKRGGLKHK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaggccggcatgatcattgtgacaagtgttacaatctccactgtcaagtcccg
gtgcagacctccttctcttgcacggttatcacatgttacagaaactgtggtgccaccttt
catatgtgtaaacatgatgagcacctgcttctttgtccaaatgagatggtcccatgcctc
aatgttgattatggctgtccactcacgatgctgcgccacaagctagccaaacacttggag
gtttgtcctgccagcatcgtctgctgctctcaggagtggaaccgttggcctgttcctgat
actgacatgaccttttacgcaaatatttctgaaagtcttcaattaaacacagagccaggt
cttgacgttgctttggctctgagggatcaagccttgttgtttcaatccatcaaaatgaga
aacgtttttcctgagctgacagaagaggaacctgccccacagaatcatcctattggcacc
atcggtgctgcagaggagggggcctcctgtcgtgattgttgtggatttgcagaaaatgcc
tgtgtaaagacagaggaaaaagaactgagtcaaaaagagagaagcgctttggcgaagagc
tcagatgtggcaagctttcagagttccagtcagtgggagaaaatatttcagaaggagaag
gagggatgcaacctgactgttaaaaagctgaatagagatgggaaagggaagggaatggaa
gagcggaacataacaaagagtgaggggggacggagaaaccctgatccgggtgaggagaat
gctggcgctgccagaaacatgaatggtgcaactggccttgcgccatggcaagacggggtc
cttgaaaggttaggcaaagaagtcaatattgccgaatataatatgtacctggtgcacaat
ggggcaatgctgataaactttggccagcttgccgcatgcaccccgagagaaaaggatttt
gtttatggaaatctggagccaattgaggttaaaactgttcgctcatttaatgttcctacc
agctatcgagcaaaacgcagtcacctgaaggatccttcacacaaggccaaaaccgaacac
cagaatgtgggcactgatttgggcatgtcggctgaagatcttccaaaatctgaagaggtc
ggctcgacactattgtgctccatggaaaaggaactaaaggggcatttgatctcagagagc
tcctctacagatggcatttatgtagatatcggaacacaaacatacattttttcctttgct
ccattcaaagccgatgcatctctagctgatgtgattgccggcaaaccacgtggcctttat
gtgtgcactgaatcagaatccgttacaagaagacacaacaaaattagctcagctttcagc
ttcatgtgtggccacttcttccgccgtgctgaataccattctcatttcaggaatgtgcat
tgtgatatacaagcctcagtaaacggctggttccaacagcgctgccccttagcatacctt
ggttgcacttttacccagatacggtttcaccctgagggtcaacaagctacaatcaaattc
tgtcaagatgccagcgcctttaagcttctgccacacttccctacatccctctgtgataat
gtgaaaagcttcatccctcaaggaagtgcaaacgattgtgatgccctgagcaggctgcca
atggagatccttcagcatatagctgggtacctcgacagtttaacgttgtctcagctgtta
caagtttcctgcctgatgagagaggtgtgcgccacactgctgcaggaaagagggatggtc
tttcttgagtggaagaaaaagacctacaaacatggtggaagttcatggaagtgtcgaaaa
aaagtttggaagttcagctctctgttttctcccgtgaaccgctggagcttcagtaacgct
ccttctatgtcggagcacctgagaacctgcacgttttaccagaaggaggagcgcagggag
ccggtggctttaacgtgcctgggagaggtcagaaacaaacgtggaggactcaagcacaaa
tga
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