Nematolebias whitei (Rio pearlfish): 119411422
Help
Entry
119411422 CDS
T08042
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119411422 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119411422 (exosc5)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119411422 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119411422
NCBI-ProteinID:
XP_037534297
LinkDB
All DBs
Position
6:48054954..48058835
Genome browser
AA seq
219 aa
AA seq
DB search
MMEVSVSSAFLREFGCEQTLLSRPDGSASFVQGDTCVMAGVYGPAEVKVSKEIYDRATLE
VLIQPKVGLPGVRERSQEQCVRETCEAALLLSLHPRSSLTLILQVLHDDGSLLACCLNAA
CMALMDAGLSMSRLFCGVTCAITADGQIVTDPTAAQEKESRALMTFAIDSSERKAIMSST
RGSFSVHELQQCLAVSQKASEKIFLFYRDSVRRRYSKNL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggtctctgtttcttctgcttttctcagagagtttggctgtgaacaaacttta
ctgtctcgacctgatggttcagcttctttcgttcagggagatacgtgcgtaatggctgga
gtgtatggaccggccgaggtcaaagtcagcaaggaaatctacgatcgagcgaccctggag
gtgctgatccaacctaaagtgggcctgccgggtgtgagggagcgatcgcaggagcagtgt
gtgagagaaacgtgtgaggcagcgctgctcttatctcttcatcctcgctcctcgctgact
ctcatccttcaggttctgcacgacgacggctccctcctggcctgctgcctgaatgcagcc
tgcatggctctgatggatgcgggtctgtccatgagccgcctgttctgtggcgtgacctgc
gccatcaccgcagacgggcagatcgtcaccgaccccacggccgctcaggagaaggaaagt
cgagctttgatgacttttgctatcgacagctcagagcgcaaagcgatcatgtcctccacc
agagggtcgttttccgttcatgagctgcagcagtgtttagctgtgagtcagaaagcttca
gagaagatcttcctcttctacagggactctgtgaggcggcggtactccaaaaacctctga
DBGET
integrated database retrieval system
