Nematolebias whitei (Rio pearlfish): 119411548
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Entry
119411548 CDS
T08042
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03440
Homologous recombination
nwh04068
FoxO signaling pathway
nwh04110
Cell cycle
nwh04115
p53 signaling pathway
nwh04210
Apoptosis
nwh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119411548 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
119411548 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119411548 (atm)
04210 Apoptosis
119411548 (atm)
04115 p53 signaling pathway
119411548 (atm)
04218 Cellular senescence
119411548 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nwh01001
]
119411548 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwh03032
]
119411548 (atm)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119411548 (atm)
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119411548 (atm)
Enzymes [BR:
nwh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
119411548 (atm)
Protein kinases [BR:
nwh01001
]
Serine/threonine kinases: Other
PIKK family [OT]
119411548 (atm)
DNA replication proteins [BR:
nwh03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
119411548 (atm)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
119411548 (atm)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
Check point factors
Other check point factors
119411548 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT_ATR
DAGK_acc
DIT1_PvcA
Motif
Other DBs
NCBI-GeneID:
119411548
NCBI-ProteinID:
XP_037534430
LinkDB
All DBs
Position
6:complement(16953763..17025555)
Genome browser
AA seq
2984 aa
AA seq
DB search
MSLRLHDLLVCCRGLENDKATERKKEAERFRRLIRSKEVMQELDHTSEIKAKRSKQLTWD
AVFRFLQRYVQKETESMQSSKSNITASTLATRQKKMAEVCSLVKHFIGYANKRGPRLKCS
ELLKHVMEVLQSPYCCSAYGEYYSSLLLKDVLSVRKYWCDIAPQQWQSLLDLYCCLFNSS
SKSINSVLLSRVLHAVVKGCCMQTDALNDSLFSFFSKALLSARQEKHLTVLEPLVSALNI
FSRSAAINYRMRLCRLGEELLPSLLYVWTEMRPSPQLKEEIVEFFRLQLCVHHPKGAKAQ
DTGAHAEDWSRWQSLLFNLYDALVREISHIGSRGKYVTGTRNIAVKDNLIELTADICHQL
FSDDSESHMLEVTPASLRATQMGSPNHGAASKRRRVEIGWDVVRDHLQPQQSDFDVIPWL
QITTVLASKYSSMIPSRELVPLLSVLHQLLAEQRRGERGLYVLRCLREVAHWQAHCSQRT
QPHRSELSRLWVRIWALALRRVSSPQAESLSLDLLASIVCGGLIDVDREFWKLFCASACK
PSQSAALCLAQAMLKCPIPNQLTSSSGWDHMGSTEGCVSPNLKETLIAWLLMSDQNDELE
DSCRPHPIICRDFPHSLIANILVSLTLKDTRVGLKFLLDSEGARCAFFQDKVSSDAKDNL
DAIESVYQLFIFSALPSEIRGADDECVKTLSADNQFAAVPALRNKLEKHLLSMADNLLNC
YSPDSQSSPPECLVRCSGLLMGVLAGYISIGFLSEEEACCSQLFTKTKDLAQELSGFVSS
VKVKMTEEGVVSTLRSVMKLCTLSTCKNPQDRLGSTSSGLFIMTFPASLLCELAEICKLL
LRNVSRRVSAVDDDEHDDDDMETSRTQHTGTDLDLSDGEESCSSTNGTHRQKGDNTDTSC
GPGAKSLLAEDYLAQQDLALIAVLEFLCECGSVQPVHGLLFKPQDVRRRLLLLLKQIDFS
KALHLNMYLVLLKKLPVEDSLSPEEFDALLRPLADLCSLYRQDQDICSAVLLSLLPSIKS
LGKTDHKQEEMRHVQGSLLQVVSGFCILNQTGKCVAAVRVALVQCLVALLEADPCCNWAI
LSLREAEAEDDPPVSSVLPSYLADAHHQVRMLVAVSVERLFLETGPKQPNKRNMLPLKLQ
QAAFENIYLKAQEGMRLLRSSSVEDQQDETFNRKAALLKSLSVVLCCSPVCEKQCLFALF
QSYKENDIEEELIKKMLCRVSNVLGYKSVKTFVSSHLYYLVAEWLSQRQSDDRYTLGSFP
YSLLDHDTIKDFYKSSYQVLIPHLVFLDDFEQVKSMGRYLERDWTLLLADCFPKIMVNIL
PYFALPGQDSQVAQQREKAHRVYDLLKDASCLGKQQIDSLIHSNLADIVVELLMTLYEDG
RAQGDTGDLKRFIGELDPVPNPPYFSSHVIKSTLDYLSRCHSANHKSLVAILSKTPISIQ
RILLALCEKAAETTNSYERHRILLMYHLFVSLLLKEVKDDLGGAWAFVLRDIIYTLIHHV
NSRPLQCDEVSNRSLSLCCDLLTSVCQVALQFCDDALDPHLQVIVGTLTTQVISQSFVSQ
QDNDFKHSNKSTTEQLKKNLIKSNAAAGSCLGELGPVDLSTIALLHGRDLLYEKAASLLS
CTESQCVYIVLHCMNEALTQQRIEVRRAAALCVKNILATQSGVNFWAEHKENRDPLLVYL
NIFRTAKKKVAAVSAEESVEAKKKLESQEFWIPQSGGHQAWLKALCTALLDSGGVRSEVL
LLSQPLCLVMVDCCQRLLPLIIHSILLEDPSGSWRELLSSHIRDFFNFCSRNAQAASRSA
TPLHSDSESNTVSLGLYDKTSLRTMLAVIDYLRHHRRPLEADRDSCGTVCDSNFWLDLNY
LEVARAAQSCSAHFTALLCTEIYVDKIKANREESCRTKSRATRKLNFEEHSQNFTISSLT
EKSMEDTNISLQELLIEVYRSIGEPDSLYGCGGETMTSPLTRIRTYEHEALWGKALTSYD
LNTALPEVTRLVGIVEGLQNFGLNSILTTYLRGLEAEGVEWGAELRELRFQAAWRNTQWD
CELSERSGKSIPGFHESIFCAVQALRDKEFFIFDQTLKQARGAEVEELCKGSLEAVSSLY
PALRNLQSISELESVKQLFSRPFSDVALSEVCSQWHQHSQLLVDSDFAVVEPILALRSVT
QHTLLSKLENPESDQDVSFVLTDHLTELCRLARKAGNTQLAERAVYQMKQHGGGGTCPVP
VWQLDEVQVFWAKGEQGLALGLLRQMIHNLEEKVDFNPTLVPLYSECLRLCGNWLAETCL
ESPGVILEKYLERAVEVIEGELRSQDFRLQSQRTEAFLSLARFSDAQYQSIDKYMNSSEF
ENKQALLEKAKEEVDLIKEQKVTNRYTVKVQKELELDEKALQNLQKDRQRFLCKAVENYI
QCLEQGEEHNTWVFRLASLWLENAGIKVVNDTMKKRVKQIPSYKFLPLMYQLAARMGTKT
TTSVSEDTGFHDVLNDLICRASLDHPHHTLFIIFALVNANKDENFCRTRMPKNSPRQASQ
FDLERSNVARKIISVVGKKRGVMVRSVERLCDAYISLAYMDASKHKTEKKAIPIPADQPI
MQIKDLREVVIPTMEIKVDPSGCYDNLVTVRSFLPHYRLVGGINLPKIIDCSGSDGTSRR
QLVKGQDDLRQDAVMQQVFSMCSMLLQRNTDTRKRKLNIRRYKVVPFSQRSGVLEWCSGT
VPIGEFLVDPNKGAHKRFRPQDWTGMACRKKMMESQRLAFDEKLEAYSEVCRRFKPVFRY
FCMERFLDPAVWMEKRLAYTRSVATSSIVGYIVGLGDRHIHNILIDEQTAELVHIDLGVA
FEQGKILPTPETVPFRLSRDIVDGMGITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLL
YDPLFDWTMNPLKAFNLQHDEQQELNATLNSTMGGGDLDSHRRSSDSQNFNKVAERVLLR
LQEKLKGVEEGTVVSVGGQVNLLIQQAMDPKNLSRLFPGWQAWV
NT seq
8955 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcgtcttcatgatctcctggtctgctgcagagggctggagaatgacaaggcc
acagagaggaagaaagaagctgaacgcttcagacggctcattcgatccaaagaggtcatg
caagaattggatcatacctcagagattaaagctaaaagatccaagcaactcacatgggac
gctgtcttcaggttcttgcagcgttatgtccagaaggagactgagagcatgcagtcgagt
aaatccaacatcaccgccagcacactggccacacgacagaagaagatggctgaagtgtgc
agcttggttaaacactttattggctatgcaaacaaacgtgggcctcgtctaaaatgcagc
gaactgctgaaacacgtgatggaggtgctgcagagtccgtactgctgctcagcatacggg
gagtattacagcagcctccttttaaaggacgtcctctctgtccgcaagtactggtgtgac
atcgccccgcagcagtggcaaagtcttttggatttgtactgctgcttgttcaactcttca
tccaaatccatcaacagtgttttgctgagcagagtcctccacgctgtggtgaagggctgc
tgcatgcagacggatgcactcaatgactctttgttcagcttcttctccaaagctctgctc
agtgccaggcaagagaaacacttgactgttttggagcccctcgtctcagcactgaacatc
ttctcgagatccgccgccattaactatcggatgagactctgtcgtctgggggaggagctt
ctgccttcgttgctgtacgtgtggacggagatgaggccgagcccacagctcaaagaggag
attgtggagttcttcaggctgcaactctgtgttcatcaccctaaaggagcaaaagcacaa
gacacaggtgctcatgcagaggactggagcaggtggcagagtttgctgtttaacctgtac
gatgctctggtccgagagatcagtcacataggcagcagggggaagtatgtcacaggaacc
agaaacatagccgtcaaagacaatctcattgagctcacggctgacatttgtcaccagctg
ttcagtgacgacagtgagagtcatatgttggaggtcaccccggcgtccctcagggccaca
cagatgggcagtcccaatcatggagcagccagcaagcgacggcgcgtcgaaataggatgg
gacgtcgttcgagaccatctgcagcctcagcaaagtgactttgatgtcataccatggctg
cagatcaccacagtgcttgcctccaagtactcgtccatgattcccagtcgggagctagtc
ccgctgctgtcagtattgcatcagctgctggcggagcagcgcaggggggagagggggctg
tatgtgctgcgctgcctaagggaggtggcccactggcaggctcactgctcgcagagaaca
cagcctcataggtccgagctcagccgactctgggttcggatatgggcccttgcattgcgg
agggtcagttcgccgcaggccgagtccctcagcctggatctgctggcctccattgtttgt
ggtgggctgatcgatgtggacagagagttctggaagctcttctgcgcatctgcatgcaaa
ccctcccagagtgctgctctgtgtctagcccaggctatgctgaagtgtccaatcccaaat
cagctcacgtcaagctcaggttgggaccatatgggaagcactgaggggtgtgtctcacct
aatctgaaggagacccttatagcctggttgctgatgagtgaccagaacgatgagctggag
gacagctgcagacctcaccccatcatctgcagagattttcctcacagtctaattgcaaac
atcttggtctcactgaccctgaaggacacaagagttggcctgaagtttctgctggattct
gagggagcaagatgtgccttttttcaagacaaagtctcctcagatgccaaagacaacctg
gatgctattgaaagtgtgtaccagctgtttatcttcagcgcgctgccttcagagatcaga
ggagctgatgacgagtgcgtgaagacgttgtccgctgacaaccagtttgctgctgttccg
gccctcagaaacaagctggagaagcacctgctctccatggctgacaatctgcttaactgc
tactctcctgactcacagtccagtcctcctgagtgtctggtgcgctgcagcggtctgctg
atgggtgttctagcaggttacatctccatcgggtttctgagtgaggaggaggcctgctgc
tcccagctcttcaccaaaacaaaggatttggcccaagaactgagtgggtttgtgtccagt
gttaaagtgaaaatgactgaggagggggttgtgtccacactgagatcagttatgaagctt
tgcacattgtccacttgcaaaaacccccaggatcgtcttggttccacctcctctggtttg
ttcataatgactttccctgccagcctcctctgtgagctggcagagatctgcaaactgctg
ttaagaaacgtgtcacggagagtcagtgctgttgacgatgatgagcatgacgatgacgac
atggaaacttccagaacccaacacaccgggactgacctggacctgtcagatggtgaggag
tcctgcagcagcaccaatggcacccacagacagaagggagacaacacggacacctcctgt
ggaccaggtgcaaaaagcctgctagcggaggattacttggcccagcaggacttggctctc
attgcagtgttggagttcttatgcgagtgtggttctgttcagcccgtccatggtctgctt
tttaagccacaagacgtgcggcgcaggttgttgcttttactgaagcagatagacttcagc
aaagccctgcacctcaacatgtatttggtcctgctgaaaaagcttcctgttgaagactcg
ctgtctccagaggaatttgatgccctgcttcgtcctctggcggacttgtgttctttgtat
cgtcaggaccaggacatctgttctgctgtcctgctcagtttgttaccttccataaagagt
ctggggaagactgaccacaagcaggaagagatgagacatgtccagggctctctgcttcaa
gtcgtgtctggcttctgcatcctgaaccagacggggaaatgtgtggcagctgtgcgagtt
gctttagtgcagtgtttggttgctttgctggaggctgacccttgctgtaactgggcgatc
ctgagtctcagagaggctgaagcagaggacgacccccccgtgtcttctgttcttccttct
tacctagccgatgcccaccatcaagttcgcatgctggtagccgtatcagtggagaggtta
tttcttgagacgggaccgaagcagccaaacaagagaaacatgttgccactaaaactccaa
caagcagcttttgagaacatttacctgaaggctcaggaggggatgaggctcttgaggagc
agctctgtagaggatcaacaggacgagacgttcaaccgtaaagcggcgctgctgaagagc
ttgtctgtcgtgctgtgctgcagcccggtttgtgaaaaacagtgcctgtttgctctcttc
cagtcctacaaggagaacgacatcgaggaagaactcatcaaaaagatgttgtgcagggtc
tccaacgtgttgggctacaagagcgtaaaaacgtttgtcagctctcatctgtactacctg
gtagccgagtggctttctcagaggcaatctgacgaccgctacactctcggctctttcccc
tacagtctgctggaccacgacacaatcaaagacttttataagtcttcctatcaggttctg
ataccccacctggtcttcctggatgactttgagcaggtgaagtccatgggccgatacctt
gagagggactggacgctgttactggctgactgtttccctaagatcatggtcaacatcctg
ccatacttcgccttgccgggtcaggattcacaagttgcacagcagagagagaaggcccac
agagtctatgacctcctgaaggacgccagctgtttgggtaaacagcaaattgacagcctg
atccacagtaacctggcagacattgtagtggagctgctgatgactctttatgaagacggc
agagcacagggagacacaggagatctgaaacgctttattggagagttggatcctgtacct
aatccaccatacttcagctcacatgtcatcaaatccacactggactacctcagcaggtgt
cacagtgccaaccacaagtcactggtagccattctgtcaaaaaccccgatttcaatccag
aggattctgctagcgttgtgcgaaaaggcagcggagacgaccaacagttacgaacgacac
cgcatcctcctcatgtaccatctgtttgtcagcctgctactcaaggaggtgaaggatgat
ctgggaggagcctgggcctttgtcctcagagacatcatctacaccctcattcaccacgtc
aacagcaggccacttcagtgtgacgaggtgtctaaccgaagcctctctctgtgctgcgat
ctgctcacctctgtgtgtcaggtggcacttcagttctgtgatgacgcccttgacccccac
ctgcaggtcattgtgggaactcttaccactcaagtgatcagtcagtcgtttgtctcacaa
caggacaatgattttaaacacagcaacaaatccacaacagaacagctgaaaaagaatcta
atcaaaagcaatgcggcagcaggcagctgtctgggagaactgggcccagttgacttgtcc
accattgccctccttcacggcagagatctcctctatgaaaaagctgcgtcccttttgagc
tgtacggagtcgcagtgcgtttacatcgtcctgcactgcatgaacgaggcgctcacacag
cagcgtatcgaggtgaggcgggccgcagctctgtgtgtgaagaacatcctggctactcag
tctggagttaacttctgggcggagcacaaagaaaacagagaccccctgctggtttatctt
aatattttcagaacagccaagaagaaggtggctgcagtgagtgctgaggagagtgtggag
gccaagaagaagctggagagccaggagttttggattccccaatcaggtgggcaccaagcc
tggctgaaggctctgtgcacggccctgctggacagtgggggggtcaggagcgaggtgcta
ctgctgtcacaaccactgtgtctggtgatggtggactgctgtcagaggctactgccgctc
atcatccactctatccttttggaagaccccagtggttcatggagggagctgctctcctcc
cacatccgggactttttcaacttctgttccagaaatgctcaggccgccagtcgctctgcc
acaccactccactccgactctgagtccaacactgtcagcctaggcttgtacgacaagact
tctctgcgtaccatgcttgctgttatagactatctgagacaccacaggagaccactggaa
gctgacagggactcttgtggcacagtgtgtgactccaacttctggctggatctgaactac
ctggaggtggcccgagctgctcagtcctgctctgcacacttcaccgctctgctgtgcaca
gagatctatgtggacaagatcaaagccaacagggaggaaagttgcagaaccaagtccaga
gcaactcgcaagctcaactttgaggagcacagccagaacttcaccatctccagtctgaca
gagaagagtatggaagacacaaacatcagtctgcaggagctgctgattgaggtgtaccgc
agcattggagagcccgacagtctgtacggctgtggaggagagaccatgaccagtcctctg
acaaggattcgaacatatgaacatgaggctttatggggaaaagccttgacctcgtatgac
cttaatactgctctgcctgaggtcactcgactggttggaattgtggagggtctgcaaaac
tttggtctgaacagcatcctcaccacctacctgcggggtttggaggctgagggggtggag
tggggagctgagctgagagagctccgcttccaggcagcctggaggaacacccagtgggac
tgtgagctgtcagagaggagtggtaaatccatccccggcttccacgaatcgatattttgt
gccgttcaggcgctgagggacaaagagttttttatatttgaccaaactctgaaacaagcc
agaggcgctgaagtggaggagctctgcaaaggcagtctcgaggctgtgtcttctctgtat
ccggccctcaggaacctgcagagcatcagtgagctggagagtgttaaacagctcttctcc
aggcctttctcagatgtggctctgagtgaagtttgcagccagtggcaccagcactctcag
ctgcttgtggacagtgattttgctgtggtggagcctattctagctttgcgttctgtgacc
cagcacaccctgttatccaagttagaaaatcctgagagtgaccaggatgtgagctttgtg
ctcacagaccatcttacggagctctgccgtttggctcgcaaggctggaaacacacagctt
gcagagcgtgcagtttatcagatgaagcagcatggtggtggagggacctgcccagtgccg
gtatggcagctggacgaggtccaggtgttctgggcaaagggagagcagggtctggctctg
gggctgctgagacagatgatacacaatcttgaagaaaaggtggattttaatccaactctg
gtaccactttactctgagtgcctcaggctgtgtggtaactggctcgctgagacctgcctg
gaaagtcctggagttatactggaaaagtacctggaaagggcagtggaggtgatcgagggg
gaactgaggtcccaggacttcaggcttcagagccagcgaaccgaggccttcctgtccttg
gctcgcttctctgatgctcagtaccagagcattgacaagtacatgaattcttctgagttt
gagaacaagcaggcgttgttggagaaggccaaagaggaggtggacctaattaaggagcaa
aaagtgaccaacagatacactgttaaggtgcaaaaagagctggagctggatgaaaaggcc
ttgcagaacctgcagaaggacagacagcgcttcctctgtaaggcagtggagaactacatc
cagtgtttggagcaaggcgaggagcacaacacctgggtgtttcggctggcttcactctgg
ctggaaaacgcaggcatcaaagtggttaatgacacaatgaagaagagagtgaagcaaatt
ccttcctacaagtttctgccactcatgtatcagctggccgctcgaatgggaaccaagacg
accaccagcgtctctgaggacactggcttccatgatgtcctaaatgatctgatttgcaga
gcgtctttggatcatcctcaccacacactattcatcatcttcgccctggtaaacgccaac
aaagacgagaatttttgcaggacacgaatgcctaagaattctccacggcaggcatcacag
tttgatctggagcgctctaatgtggcacgcaagatcatcagtgtagtcggtaaaaaacga
ggcgtcatggtccgaagcgtcgagcgcttgtgcgacgcctacatctctctggcttacatg
gacgccagcaagcacaagactgagaagaaggccattcccatccctgctgatcaacccatc
atgcaaatcaaagacctcagggaggttgtcatcccaaccatggagatcaaggtggatccg
tctggttgctacgacaacctggtgactgtcaggtccttcctgcctcactatcggctcgtc
ggaggaatcaacctgcccaagatcatcgactgctccggctctgacggaacgagcaggaga
cagctggtcaaaggtcaggacgacctgcggcaggacgcagtgatgcagcaggtcttcagc
atgtgctccatgctgctgcaacgaaacactgatactcggaagaggaagctcaacatcaga
agatacaaggtggtaccgttctcgcagcgcagtggggtgttggagtggtgctctggcacg
gtgcccattggggagttcttggtggatcctaacaaaggagcccacaaacgcttcagacca
caggactggaccggcatggcttgccgcaagaaaatgatggagtctcagaggctggcgttt
gatgagaagctggaggcctacagtgaggtttgtaggaggttcaagccggtctttaggtac
ttctgcatggagcggttcctggatcctgcagtgtggatggagaagcggttagcctacact
cgcagtgtggccacctcctccatagttggctacattgttggtctgggcgacagacacatc
cataacatcctgatcgatgaacagaccgctgaactagtgcacattgatttaggggtggct
tttgagcagggtaagatcctccccacccctgagactgtccccttcaggctctccagagac
attgtggatggtatgggcatcactggagtggagggagttttcagaagatgctgtgaaaag
acgatggaggtgatgaggagctcccaagaagctctgctgacaattgtagaggtgctgctg
tacgaccctctgtttgactggaccatgaatcccctgaaggccttcaacctgcagcacgac
gagcagcaggagctcaacgccaccctgaactccaccatgggaggaggtgaccttgacagc
catcgtagatccagcgacagccagaacttcaacaaggtggcggagcgagtgctgctgcgg
ctgcaggagaagctaaagggggtggaggaagggacggtggtcagtgtgggggggcaggtc
aacctgctcattcagcaagccatggacccaaagaacctgagcagactcttcccaggatgg
caggcctgggtgtaa
DBGET
integrated database retrieval system
