Nematolebias whitei (Rio pearlfish): 119411628
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Entry
119411628 CDS
T08042
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119411628 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119411628 (usp48)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119411628 (usp48)
Peptidases and inhibitors [BR:
nwh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119411628 (usp48)
Ubiquitin system [BR:
nwh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119411628 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
119411628
NCBI-ProteinID:
XP_037534462
LinkDB
All DBs
Position
7:complement(226329..469242)
Genome browser
AA seq
955 aa
AA seq
DB search
TFVGLTNLGATCYVNTFLQVWFHNLELRRSLYQCLSSRAQDHCTESDYEPQSICDHLQYI
FALMQNSNRKYIDPSGLVRALGLDTGQQQDAQEFSKLFLSLLEDTLSKLKNTNLHNVIQQ
QFCGQFSYVTVCNQCGRSSARPSRFYELELNIQGHKNLAECITEFLKEEKLDGENCYFCE
SCQSKQRATRRIRLHSLPSTLNLQLMRFVFDRQTGHKKKLNTFISFPEQLDMGPFLEGRP
DLKYVYELSAVLIHRGISAYSGHYIAHVKDALTGDWYKFNDEEIEKMEGKKLHLGIEEDI
AETVKSQSRKPKCSKGYHCSRNAYMLVYKIQGDEDSAHSKTKVEVPAFLQRLVDQDNHKF
EEWCTEMANMRKQSVDKGKAKHEEVKELYKLLPAEDGEHYEFIPLDWLKKWLDDSTATKK
IDNTLFLCSHGKLHPDKIGEVKRVSLQAANLLYERYGGGPRLDGSTLCNECVGQRCRMMR
LKNQLSEDFKEVSNLIKCLLSDEGFWVGKASLRCWRQMALDQLEEAEVETKHNHSKTNGQ
GLHTNSQEFHSNLSEGAEDEMKTFNEDLVCSHGGLNILETERKLVSTEVWIKLKKYFPKA
PEFNQNQGPCQQCLTLEQEEKDNEAVSKMMALDQKNQLLNLFHEKNRPALTKWPQGTDVL
YIVPLFFVEEWKKFIRRPTKSSPVSNVGNTLLLCPHGGFMFTYDSLINGEAQHVTLLWPN
EWEVISRLFIVDQPISIHCLKQTTPNGCTTHYTTHPDLCWECRQSFLFQQQRDLRDYTQA
TIYIRKVIEDKRDTAREMIASSSEAEEEREEHPKQDGEKDPDFSKSQDGAKRLKLSDSTA
LPVTTVSKAGGIRRSTRHRKLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIEGK
GLTDDSATLGSLGVIPESIICLKADEPIADYAAIDDAYQVRVPEEGFKGTGLLGH
NT seq
2870 nt
NT seq
+upstream
nt +downstream
nt
acacatttgttggtctgactaatcttggtgcaacatgctacgtcaacacattcctgcaag
tatggttccataacctggagcttcgtaggagcctttatcagtgcctcagttcccgagcac
aggaccactgcactgagtcagattacgagccccagtccatctgcgatcatctgcagtaca
tttttgcactcatgcagaacagcaacagaaagtatatcgacccttcaggactagtcagag
cactaggtctggatacaggacaacaacaggatgcccaggagttttcaaagcttttcttgt
ctttgttggaggacacattgtccaagctgaagaacaccaacctgcacaatgtcatccagc
agcagttctgtggacagttctcctatgttacagtatgtaatcagtgtggacgatcttctg
cacgtccatcccggttctatgagttggagctgaacattcagggccacaaaaatcttgctg
agtgcatcacagagttcctaaaggaagagaaactggatggggagaattgttacttttgtg
agagctgtcagagtaaacagagagccacacggaggatcagactgcacagcctaccttcaa
ccctcaatctgcagcttatgcgatttgtctttgacaggcaaacaggccataagaagaagc
tcaacactttcatcagttttccagaacagctggatatgggaccatttttggaagggagac
cagatctgaagtatgtctatgaactgagtgctgttctgatccatcggggcatcagtgctt
attcgggtcactacattgctcatgtgaaggatgcgctgactggtgactggtacaaattca
atgatgaggaaatagagaaaatggaaggaaagaagctgcatcttggtattgaagaggata
ttgctgagacggtgaaatcccagtcacgaaagcccaagtgcagcaaaggttatcactgct
ctagaaatgcctacatgttggtgtacaagatccaaggtgatgaggactctgctcactcca
agaccaaagttgaggtgccagcttttcttcagaggctggttgaccaggacaaccataaat
tcgaagagtggtgcacagagatggcaaatatgagaaaacagagtgtggataaaggcaaag
ccaagcatgaagaggtgaaagagctctacaagcttttacctgcagaagatggagagcatt
atgagtttatccccctagactggttgaagaaatggcttgatgactccactgctacaaaga
aaattgacaacactcttttcctgtgttcccatggaaaactgcacccagacaagataggag
aggtcaaaagggtttctttgcaagctgcaaacctgttatatgaacgctatggtggaggac
caagactagatggctccactctttgcaatgagtgtgttggccagcgatgcagaatgatgc
gactgaaaaaccagctcagtgaagatttcaaagaagtttcaaatctaatcaaatgtttgc
tcagtgatgagggtttctgggtgggcaaagcgtctttgcgttgctggaggcaaatggctt
tggaccagttggaagaggctgaggttgaaaccaaacacaaccacagcaagactaatgggc
agggactgcacactaacagccaggagtttcattcaaatctctcggagggtgcagaggatg
aaatgaagactttcaatgaagaccttgtctgcagtcatggaggcctgaatattttggaga
cagaacgaaagctggtatctactgaagtttggatcaaattgaaaaaatatttcccaaaag
ccccagagttcaaccaaaaccaaggtccctgtcagcagtgtctgacgttagagcaggaag
aaaaggacaatgaagcagtcagtaaaatgatggctctcgatcaaaagaaccagctgctga
acctcttccatgaaaagaaccgaccagcactcacaaaatggccccagggtacagatgtac
tttacatagttcctctgttttttgtggaagaatggaaaaaattcatcaggagacccacaa
aatcctctccagtgtctaatgttggcaacactctgctgctctgtccccatggtggcttca
tgttcacctacgactctctgatcaatggagaggcacaacatgtaactctgctttggccaa
atgaatgggaggtgatcagcagactcttcattgttgaccagccaatatccatccactgct
taaaacagaccacaccaaatggatgcactacccattacaccactcaccctgatctgtgtt
gggagtgcagacagagcttcctattccagcaacagagggatctcagagattacacccaag
caaccatctatatccgtaaagttattgaagacaagagggacactgctcgagagatgatag
ccagcagttctgaggcagaagaggagagggaagagcatcctaagcaggatggagagaaag
accccgacttcagtaagtcacaagatggtgcaaagcggctaaagttgagtgacagcactg
ctctacctgtgaccactgtgagcaaagcaggtggaatcaggagaagcactcggcacagga
aactcagaggggagaaagcactcattgtttcagctaatcaaacactaaaagagctcaaga
ttcaaattatgcacgccttctctgtggctccatttgaccagaatctctccattgaaggaa
aaggtctgacagatgactcagccaccctgggaagtttgggtgtcatcccagagagcatca
tctgtttgaaggctgatgagcccatagcagattatgctgcaatagatgatgcctatcaag
tgagagtgcctgaagagggttttaaaggcacagggcttctgggacactga
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integrated database retrieval system
