Nematolebias whitei (Rio pearlfish): 119411641
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Entry
119411641 CDS
T08042
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119411641 (ap5b1)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
119411641 (ap5b1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
119411641
NCBI-ProteinID:
XP_037534473
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Position
7:complement(4467943..4473093)
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AA seq
925 aa
AA seq
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MASKWPERVGSFCSGPSSFLSGTNPEVFLSELLRELRDDRASSSIKVVLLSPLCEYPTLL
CPSDPAGEETALDLMSVFTQCPPTCTQFRCQLLVTLTCVLICSSCVSKRSQVSLDFLDLV
LQVAQDTGDISSTSPQRSLRATACDCLRDLEACCPGLLSQRLELLGGLRQQETSRLHQVY
TGLQTVALRNAVYHLSQEPGAGAEHLKALLGGNTSAVWEADQDSFQMEGKDWPGLASLVL
GPMGSVPTLHTGADCKELKSVLSSLLEESYLLTPLCQAALLHRVTEVVAMVPGVSPAILR
AQLLRLLGTSEVCLFHVALLMKGAFTDSLFSAEDEAFLLKRLVVLSQHPVLSTPEKLFYM
DCILHFPENRPISCGDGEALPVLLTPQLASAVLPTVFNDGGTLLARLRLLSLVYLEEGDV
GGEGLAYLYGQLRSLLRVVESGGSRDIAVTFFRAAFLVLLYFSHMEQFCSGLSRQLCQLY
LQHPQLAPHIINMADRTQERLPESGWALGLLRGLQKVITEARLTLQDLGWHLKVLARVAE
EAEISQRCTLTILTSIITSSLCTGGDWRLGNGLLGVCRRLLLHPTVDSMLVALADILQHL
ACHYGDTDIQDHARLYFTLLTTLSQEKLAAMLEQGPTEGERQVKKRTLSCLMAESEGLTS
TLTVHRTDKPILRLTEAPEQPEETTSCDSNQNELNEALETYRAQFADPHFASEVTLKYQL
THTEASEPGFDQIFSIRLHFDLTDHHYEQLEDISVPCLFRERPPPVVQLRLKPRQPYPTS
LHVSAMFTTREGLTWHTHLPDVHVVFQQVFMPLPAPPSWAPGSRLKVFQNLWDEICSETG
DGAVSLFCCQLRGAALNVLLDKHLLPFLLPGPSGQEESKVLIYLPPQNHVLLSIRAEEDA
VHFDIATDNWQLLPHVNSYLLTITS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagtggccggagagggtcggttctttttgcagcggtccgtccagcttcctg
tcgggaacaaacccggaagtgttcctgtcggagctgctgagggagctccgagatgaccga
gccagctccagcatcaaggtggtcctgttgtctcctctctgtgagtacccgactctgctg
tgtccatcagaccctgccggggaagagacggccctggacctgatgtccgtgttcacccag
tgtccccctacatgcacccagttccgctgccagctcctggtgaccctcacctgcgtcctg
atctgctcctcctgtgtgagcaagcgttcccaagtgtccctggacttcctggacctggtg
cttcaagttgctcaggacaccggtgacatcagcagtaccagcccacagcgctctctgagg
gccaccgcttgcgactgccttcgggatctggaggcctgctgccctggcctcctctcccag
cgcctggagctcctgggtgggctgcggcagcaggagacctccaggctgcaccaggtctac
acgggccttcaaacggtggctctgagaaatgcggtttatcatctcagtcaggaaccagga
gcaggggccgagcatcttaaagctctcctgggaggaaacacttcggccgtgtgggaagca
gaccaggactcgtttcagatggaaggcaaagactggcctggactggcctccctggtcctg
ggcccgatgggctcggtgccgacgctccacactggagctgactgtaaggagctgaaatcg
gtcctgtcctctctgttagaggagtcctaccttctcactcccctgtgccaggctgcactt
ctgcacagagtcaccgaggtggtcgccatggtaccgggggtctcgccggccattttgaga
gctcagctgctgcggctgctgggaaccagtgaggtgtgcctgtttcatgtggccctgctg
atgaagggtgcgttcaccgacagcttgttcagcgctgaagacgaggccttcctcctgaag
cggctggtggtcctgtcccagcacccggtcctcagcacacctgagaagctcttctacatg
gactgcatcctgcacttcccagagaaccgtccaatcagctgcggcgacggtgaggccctc
cctgtgctgctaaccccgcagctggcttcagccgttctgcccacggtgttcaacgatggc
ggcaccctgctggctcggctccgcctgctgtccttggtctacctggaggaaggagacgtg
gggggtgagggactggcctacctgtatggtcagctgaggtcgctgctacgtgtcgtagag
agcggaggcagcagagatatcgcggtgacttttttcagagcggccttcctcgtcctcctt
tacttcagccacatggagcagttctgttcaggtctgagccgccagctgtgtcagctctac
ctgcagcacccccagctggcccctcacatcatcaacatggccgaccggactcaggagaga
cttcctgagtctggctgggctttaggactactgaggggcctccagaaggtgatcacagag
gcccggctcaccctacaggaccttggctggcacctgaaggttctcgctcgggtggcagag
gaagcagaaatcagccagcgctgcaccctcaccatcctgaccagcatcatcacctcctct
ctgtgcaccggtggtgactggcgtctgggaaacggcttgctaggagtttgccgccgtttg
ctccttcaccccactgtggactccatgcttgtcgctctggcggacatccttcagcacctc
gcgtgtcactatggagacacggacattcaggaccatgcccgcctctacttcaccctcctc
accacgctgtctcaggagaagctggcagcgatgctggaacagggcccgactgaaggcgag
cgtcaggtcaagaagagaacactgtcctgtctcatggctgagagcgagggactgacgagc
acgctaaccgtccaccggacagacaagcccatactccgtctgactgaggctccggaacag
ccggaagaaaccacaagctgcgactcaaaccagaacgagctcaacgaagcactggaaacc
tacagagctcagttcgccgaccctcactttgcttcagaagttaccttgaagtaccagctg
acccacacggaggcttctgaacctggtttcgaccagatctttagcatccgcctacacttc
gacctcaccgaccatcactacgagcagctggaggacataagtgtcccatgtctcttcaga
gagagaccgccacctgtagtccagctcagactgaagccccggcagccttaccccaccagc
ctccacgtgagcgccatgttcaccaccagagaagggttgacctggcacacccatctgccc
gatgttcatgtggtgttccagcaggtcttcatgcctctgccggcacccccatcctgggct
ccaggaagcagactgaaggtgttccagaacctctgggacgaaatctgctccgagacggga
gacggagccgtcagtctgttctgctgccagctgaggggggcggctctgaacgtgctgctg
gacaaacacctcctgcccttcctcctgccaggcccgtccggacaagaggagtccaaggtt
ctgatttatctccctcctcagaaccacgtgctgctgagcatcagagccgaggaggacgcc
gtgcacttcgacatcgccactgataactggcagcttctgccacacgtgaactcctacctg
ctgaccatcacgagctga
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