Nematolebias whitei (Rio pearlfish): 119411705
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Entry
119411705 CDS
T08042
Symbol
magi1b
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1b
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119411705 (magi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
HTH_65
Motif
Other DBs
NCBI-GeneID:
119411705
NCBI-ProteinID:
XP_037534545
LinkDB
All DBs
Position
7:complement(10315890..10505677)
Genome browser
AA seq
1709 aa
AA seq
DB search
MSKAVLKKPHWTSRVNECAVSKDARGDLNVSLRGGAENGEFAYIGQITGGLVAYQYGQLG
EGELLLEVETLSISGLPLYDVETVIKNCKSPVRLKTVRPGTKLNKDLKHYLTQRFQKSSA
DHELQQTIRENLYHHAVPCTTRTPREGEVPGVDYNFLSVEEFLELEKSGTLLEIGTYEGN
YYGTPKPPLQPPIGKVISSGGDALLPDRLSRSLPGSQHSSPQRAKSYNDMQNAGIGFGEQ
QQEDDEDLPDLNSSFTGDSSELDEVHQPVRPYAPHQSDLSYAGTSPSPSATTESTQQSHS
HLSHPPPEDPLGPLPDNWEMAYTENGEVYFIDHNTKTTSWLDPRSLDKSQKPLEESEDDE
GVHTEELDNDLELPPGWEKIDDPVYGVYYVDHINRKTQYENPVLEAKKRRQLEHLPQQPQ
PQSQQPPEGERYIREWIEDSALAGAPLASYAANHETYREPQIGPTVPSAMGQKRGKPFFT
RNRSELNGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIV
SVNDTCVLGYTHAQVVKIFQSIPIGSMVNLELCRGYPLPFDPDDPNTSLVTSVAILDNKE
PIIVNGQEVSNSYDSPSSQGSQSLNNGPINGGVAPLNGLPQPLSPTTETASDTSSQLGYS
SDVVTLASAIATQPELITVHMEKGDKGFGFTIADSPGGGGQRVKQIVDYPRCRGLREGDI
IVEVNKRNVQSMSHNQVVDLLSKCPKGSEVTMLVQRGVAPAKKSPKLQLSRKDSQNSSQH
SVSSHRSAHTESPSHSSLAPPLSETGAPPPPSQPLPGLPSQDSQGDGTIQRKPDPFKIWA
QSRSMYESRLPDFQEKDIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGAADEDGRLRS
GDELICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVQRKSGFAVKAEGDVPPSPASSHH
SSTQAPSLTEEIGRRTLQGSQNSLNTVSSGSGSTSGIGSGGGGTGVAVSGNSVVAATAAT
TSSSQPPIANSTGVSSAVQPYDVEIRRGENEGFGFVIVSSVSRPEAGTTFAGNACVAMPH
KIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDES
SNASLLTNAEKIATITTTHTAQQQATPEARTNTKPKQESYEFKAPPAPPPQSTTQTDSAQ
DSEFYSVDLERDNKGFGFSLRGGREYNMDLYVLRLAEEGAAVRNGKMRVGDEILEINGES
TKGMKHARAIELIKNGGRRVHLVLKRGDGSVPEYDGNPDDLIPADTITRLQNAAEVSNLP
QVSTPSESSNPPEPPQTSRTKPERSRRTHGTGTQHRSKHRHHSPNKTSTGKHRRRKKDGK
ENHGHRHQSSGRHRSRHHSPNKGHSRSRSADNLDNQHRGHRRGRSPERRHGHHSSSNHRS
PYRSPRRSPYRSPRRSPYRSPRRSPYRSPHRHRSPHRSRHYSPTRRRHHSTDPYRYGSAE
RQTRQNEKPVSNVAALNDPVRTPEPNLFDDLDLQESSTLGRLNREVTLPPYKKEARQYGE
NSLLMQPSSMERAYRGDRLLSDVPSHTQMNTYRDLTLPRVRTPDFDSAYEKYSSLLRGHT
PDMIEQDGRRASGSITPDLQYRSRSLGRTISPVRFREDDSEDEEDDDNFVAAKVKEYYNT
LKTNTSRPSKPVLPEPKKTYKENPKDLSI
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagccgtgctaaagaaaccccactggacctccagagtgaacgagtgcgccgtg
agtaaagacgcccgcggggacctgaacgtgtctctgcgcggcggcgccgagaacggagag
ttcgcttacatcggacaaattaccgggggtctggtggcgtaccagtacggacagttaggg
gaaggggaacttctactggaggtggagaccctctcgatttcaggattacctctgtacgac
gtggagacggtcataaagaactgcaaaagtccagtgaggttgaaaactgtgaggccagga
actaagctaaataaggacctgaagcactatctaacccagcgcttccagaagtcgtcagct
gaccacgagctgcaacagaccattcgagaaaacctgtaccatcacgcagtgccttgtaca
acccgcaccccacgtgaaggagaagtccctggcgtggactacaacttcctctctgtagag
gaattcttggagttggagaaaagtggaactctgctggaaataggaacatatgaaggtaac
tattatgggactcccaagccaccgctgcagccccccattgggaaagtgattagcagtggt
ggtgatgccctactgccagacaggctcagccgcagcctgccgggctctcagcactccagt
cctcaacgtgccaagtcctacaatgacatgcaaaatgctggaatagggtttggtgagcag
caacaggaagacgacgaggacctccctgacctgaacagtagctttacaggagactcgagt
gaattagacgaagttcatcagccggtgcgcccctacgcccctcaccagagtgacttgtcc
tacgctgggacatccccctcaccatcggccaccacggagagcacacagcagtcacactct
cacctgagccatcctcccccggaggatccgctgggacctctgcctgacaactgggagatg
gcctacaccgagaacggagaggtctactttatagaccataatacaaagaccacctcttgg
ttagaccctcggagtctggacaaatctcagaaacccctggaagaaagcgaagatgatgaa
ggggtgcatacggaggagctggataatgatctagagcttccaccaggatgggagaaaata
gacgatccagtctacggggtctactacgttgatcatataaacaggaagacccagtatgag
aacccagtgctggaggctaagaagcgcaggcagctggagcatctgccccagcagcctcag
ccccagagccagcagccacctgaaggtgagcgctacatccgagagtggatcgaggactcg
gcattagcaggggctccattggccagctatgctgccaaccatgagacctacagggagccc
caaataggtcccaccgtgcccagtgccatgggacaaaaacgaggaaagcctttcttcact
cggaaccgatctgaactgaacgggacctttattaataccaaactaaagaagagtcgtaga
gggtttggttttactgttgttggaggggatgaacctgatgagttcctccagataaagagc
ttagttcttgatggacctgctgccctcgatggcaaaatggagacaggtgacgtgattgtg
agcgtcaatgacacctgcgtactaggctacacacatgcccaagttgtaaagatctttcag
tcgattcccattggttccatggtcaacttggagctttgtcgtggctatcctctgcctttt
gacccggacgatccgaacaccagcctggttacctcagtggccattcttgacaacaaagaa
cccataatcgtcaatggccaggaagtctccaacagctatgactcgccatctagccaaggc
agtcagagcctcaacaatggccctatcaacggtggagtggcacctctcaatggcctcccc
caacctcttagccccactacagagactgcttctgatacctcctcccagcttggttactcc
agtgacgtggtaaccttggcatcagccattgcaacacaacctgaactcatcactgtacac
atggagaaaggagacaagggctttggcttcacaattgcggacagtcccggtggtggagga
cagagagtgaagcagattgtggactacccacgctgccgtggcctcagggagggggacatc
atcgtcgaggtgaacaaaagaaatgtgcagagcatgtctcacaaccaggtggtggacctg
ctcagcaagtgtccaaaaggcagtgaggtcaccatgctggtgcagagaggagtggcacct
gcaaagaagagccccaaactgcaattgtcaaggaaggacagtcagaacagttcccagcac
agcgtttccagccaccggagcgctcacaccgagtcgcccagtcactcgtccctggcaccc
ccgctcagtgaaaccggtgctccccctcccccctcacagcccttacctggcctcccatcc
caggactctcaaggagacgggaccatccagagaaaaccggacccctttaagatttgggcc
cagtctaggagcatgtatgaaagtaggcttccagacttccaggaaaaggacattttcctg
tggaggaaggatacagggtttggctttaggatccttggaggcaatgagccgggggaacct
atctacattggccacatagtaaagtatggtgctgccgacgaggacgggcgtctgcggtcc
ggtgatgaactcatatgtgtggacggcacagcagtggtgggcaagtcacatcagctggtg
gtgcaactgatgcagcaggcggccaaacagggccacgttaatctcaccgtgcaacgcaaa
tccggctttgcagttaaagcagagggagatgtgcctccatcaccagcgtcttcacaccac
agcagcacgcaggcgcccagcctgacggaggaaatcgggaggcgcaccctgcagggcagc
cagaattccctcaacaccgtcagctccggtagcggctccacctctggcattggcagtggt
ggaggaggcaccggggtggcggttagtgggaactctgtagtcgccgccacagctgccacc
acttcctcctcccagccccccattgccaactccaccggcgtctcctctgcggtgcagccc
tatgacgtcgagatccgacgtggtgaaaacgaaggatttggcttcgtcatcgtctcgtca
gtgtcgcgtcctgaagcaggcaccacctttgctggaaatgcatgtgtggccatgcctcac
aaaatagggcgcatcatcgaagggagcccagcggaccgctgtgggaagctgaaggttggc
gaccgcatcctggctgtgaatggatgctccatcaccaataaatcccactctgacatcgtc
aacctcatcaaggaggcagggaacactgtcacactgcgcatcattcctggagacgagtca
tcaaacgcatctttactgacaaatgcagagaagatcgccactatcaccaccactcacacc
gctcagcaacaggccacacctgaggccaggaccaacaccaaaccaaaacaagaatcttat
gaattcaaagcaccaccagctccccctcctcagtccaccacccagacggattcagctcag
gattcggagttctactcggtggacctggagcgggacaacaaaggttttggcttcagcctg
cggggaggcagagagtacaacatggacctgtacgtgctacggctggctgaggagggagca
gctgtgcgcaacggaaaaatgagggtcggcgatgaaatcttggagataaacggcgaaagc
accaagggcatgaagcacgcgcgagccatcgagctcatcaagaacggaggacgacgcgtc
catctggtgctcaagaggggggatggctccgtgcctgaatatgacggcaaccctgacgac
ctcatcccagccgacacaatcacaaggctacaaaacgctgcggaagtgagcaacctgccc
caagtgagcacgccatcagagtcgagcaacccaccagaacccccgcaaacatcccggacc
aagccagagcggagccgccggactcatggcactggcacacagcaccgttccaaacaccgt
caccactcccctaacaaaaccagcacaggaaaacacaggaggaggaagaaggatggcaag
gaaaatcacgggcaccgccaccaatccagcgggcgccaccgtagccgccaccactctcct
aacaaggggcacagccggtcgcgcagtgcagacaacctggataaccaacatcgaggacac
cgccgtggtcgctctccagaaaggaggcacggtcatcattcttcctccaaccaccgctcc
ccgtaccgttctccacgacgctcgccttaccgctcgcccagacgctcgccttaccgctcg
cccagacgatctccgtatcgctctcctcaccgtcacaggtctccccaccgctctcggcac
tactcccctaccagacgtcgccaccactcaacagacccctaccggtatggctctgcggaa
agacagactcgtcaaaatgagaagcctgtttccaatgtggcagcgctgaatgacccagtc
aggacccctgaacccaacctttttgatgacctcgatctgcaggagtcctctaccctgggc
cgtctaaacagggaagtcactcttccaccttataagaaagaggctcgccagtatggagag
aacagcctactcatgcaaccctcctccatggaaagggcctacagaggggacaggttgctg
agtgacgtgccgtcccacacccagatgaacacttacagagacttaaccctgcccagagtc
cgcacccccgactttgactcagcctacgagaagtacagctcgctgttgagggggcacacg
cctgatatgatagagcaggatgggcgccgtgccagcggaagtattactcccgatcttcag
taccgatcccgcagcctgggacgaaccatctccccagtcaggttcagagaggacgactcc
gaggatgaagaggacgatgacaattttgtagcggctaaagtgaaagagtactacaacaca
ctcaagaccaacaccagtcgtccgtctaagcctgtgctccccgagcccaagaagacctac
aaggagaatcccaaagacctgagcatctga
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