Nematolebias whitei (Rio pearlfish): 119411720
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Entry
119411720 CDS
T08042
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119411720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119411720
03036 Chromosome and associated proteins [BR:
nwh03036
]
119411720
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119411720
Coactivators
SAGA/TFTC/STAGA complex
119411720
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119411720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
119411720
NCBI-ProteinID:
XP_037534566
LinkDB
All DBs
Position
7:12663733..12687853
Genome browser
AA seq
817 aa
AA seq
DB search
MDASKASTDSKAGFDPTKALVSDGLTFLPNHQGKVGSYSVQTFNGSQTMSCHGAGDAGPG
VASTIGPSGGGSVLSKVQPSSVIQTPLVNSESAAAGQPGSQAASGPTVTLVRQPMQTAGS
GATLNGSPAAATNQTAQAPPVHTGQPGCSASVIAGSHIVTAEPPTTIIQSAPQPTGTISA
PRPPVMAATGGAIPQMLTPRLPQPNPGQPSVHNFQLHSGMVLMHSNSGQLLMIPHQALAQ
LQAQAQGGMAPRTATPMNVSTGQAPGNTIISRHVSPSTIIRQSCPAAAPLSATTTLHRPP
LLPGSVGATTPGITPRTLSQTTGTTVTSVTVSKETLELVMKCKNFLSTLMKLASSGKQST
ETAAIVRELVKDLLEAKLEAEEFTSRLYKELKSSPQPYLVPFLKRSLPALRQLTPDAAAF
IQQSQLPQPASGPSPGPVSSASSPSTTMVLGSPAPRLTAPICRPQLQPAISNPVQTTSLV
LQPQQQRAILRPQLTLPTASMNALRTQAPGRIMVGQQQVQLKELQPVPLRPEAPVVSKQL
FGAALTQAQKMKLKEAGGMFKDDDDINDVASMAGVNLSEESANILATNSGLVGSVTHSCK
DEAFLSCAVLQRRMLELGRKHGVTDLGMEVVNYVSYVTQQRLQNLLEKVSQVAQQKNVNF
KEDDNYEQISDVRAQLKFFEQLDQLEKQRKEEQEREILLKAAKSRARQEDPEQLRLKQKA
KEMQQQELAQMRQREANLTALAAIGPRKKRKNLDSPSSSASAEGSGTGASVTGGAGSSGS
RPTRQRITRVNLRDLLFCLEDERFTRHSHFLYKGFLK
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcgaaagccagcaccgactccaaagcgggcttcgacccgaccaaagcactt
gtcagtgacggtttaacttttctccccaatcaccagggaaaagtgggctcatactcagtg
cagacttttaatgggagccaaactatgagctgtcacggcgcaggagacgctggccccggc
gtggcgtcgaccatcggtcccagcggcggcggctcggtgctgtccaaagtgcagcccagc
agcgtcatccagacgccgctcgtgaactcggagagtgccgcagccggtcagcccgggagc
caggcagcatcaggacccaccgtgacgctcgtcaggcagcccatgcaaacagcggggtcg
ggtgcaactttgaacgggagccccgccgcggcaacaaatcagacggctcaagctccgccc
gtgcacaccggccagccgggctgctctgcgtctgtcatcgcaggctcgcacattgtcacg
gcagagccccccaccaccatcatacagtcagctccgcagcccaccggcaccatcagtgcc
ccacgacccccggtgatggcagctactgggggggccataccccagatgctgaccccgaga
ctcccccagccgaacccgggacagcccagcgtgcacaactttcagctccactcggggatg
gtgctcatgcacagcaacagtggacagctgttgatgattcctcaccaggctctcgcccaa
ttgcaagcgcaggcacagggaggcatggcgcctcggaccgctacaccaatgaacgtgtcc
acaggacaggctcctggaaacacaatcatcagccgacatgtgtctccaagcaccatcatc
cgacaaagctgtccagctgcagcgccgctctctgcgaccaccacccttcacagacctcct
ctcctgccgggctcagttggggccacgacaccaggaatcacccctcggaccctcagccag
acaactgggaccacagttacttcagtaacagtgagcaaagagacgttggagcttgtgatg
aaatgtaaaaacttcttgtctacactgatgaagctggcgtccagtgggaagcagtccaca
gagactgcagccatcgtgagagagctggtcaaagacctgctggaggccaagctggaagct
gaagaattcaccagcagattgtacaaagaactcaaatcttcaccccaaccatatctcgtg
ccttttctaaagagaagcctccctgctctgaggcagctcacaccagacgcagcagctttc
attcagcagagtcagcttcctcagccagcctcaggtccaagtccaggtccagtctcctct
gcttcatctccctccaccacaatggttctgggcagcccggcccctcgcctcactgctccc
atctgtaggccccagctccagccagccatcagcaacccagtacagacgacgtcactggtt
ctccagcctcagcagcaaagagcaattttgcgacctcagctaactctaccaacagcctcc
atgaacgctctgagaactcaggctcccggtcgcatcatggtgggacagcaacaggtacag
ctgaaagagctgcagccagttcccttgaggccggaggcgccagttgtttccaaacaactc
tttggtgcagctttgacccaagctcaaaagatgaagctgaaagaggcgggtggcatgttc
aaagatgatgatgacatcaacgacgtggcctccatggctggagtaaacctttcagaggaa
agtgctaatatcctcgccaccaactctggacttgttggctcagtgacacattcctgtaag
gacgaggcttttctctcctgtgccgtgctgcagaggagaatgctggagttaggtaggaag
cacggagtaacggatctgggcatggaggtcgtgaattatgtctcctatgtcactcagcag
agactccagaacctgctagaaaaagtgtcccaagtagctcagcagaaaaatgtcaacttc
aaggaggatgacaactatgagcagatcagtgacgttcgggctcagctgaagttctttgag
cagctggaccagctagagaagcagaggaaggaggagcaggagagagaaatcctcctgaag
gcagctaagtctcgagctcgacaagaggatccagagcagctgcgtctgaagcaaaaggct
aaagagatgcaacagcaggagttggctcagatgagacaaagagaggccaacctgacagct
ttggcagccatcggccccaggaagaagagaaagaacctggactctccatcttcatctgct
tcagctgagggatcaggaacgggtgcctctgtgacgggcggggctggttcatcggggtcc
agacccactcggcagcgcatcacccgcgtcaatctcagggacctgctgttctgcttggag
gacgagagattcacccgtcactcccatttcctctacaagggctttctcaaatag
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