Nematolebias whitei (Rio pearlfish): 119411736
Help
Entry
119411736 CDS
T08042
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a
KO
K14966
host cell factor 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03083
Polycomb repressive complex
nwh04980
Cobalamin transport and metabolism
nwh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119411736 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
119411736 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119411736 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nwh01009
]
119411736 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119411736 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
nwh03029
]
119411736 (hcfc1a)
Protein phosphatases and associated proteins [BR:
nwh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119411736 (hcfc1a)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
119411736 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
119411736 (hcfc1a)
MLL-HCF complex
119411736 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
119411736 (hcfc1a)
Mitochondrial biogenesis [BR:
nwh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
119411736 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
119411736
NCBI-ProteinID:
XP_037534589
LinkDB
All DBs
Position
7:complement(14418570..14431303)
Genome browser
AA seq
1737 aa
AA seq
DB search
MSAPGSAVTGTTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTTRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPTVGGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMYWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETDRPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPATSATPSQ
PINSPKSPAPAAAAPSAQSLPQTAVLKVAAQQSATGASVVTVRPSQPGKSPVTVTSLPPG
VRMVVPTQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVAV
SPGTTTMKVASPVMVSNPATRMLKTAAAQVGIATASSPTTTRPIITVHKSGAVTVAQQAQ
VVTTVVGGVTKTITLVKSPLTMGGSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLTQ
IIQTKGSLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPATTKQGTTII
KTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTSGTPGKIITAVPKLTTAAGQQGLT
QVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTG
TVSTTLAGGTADSSSASLVTPITTLGTIATLSSQVISPAAITVSAAQTSLASTATLSSPT
MTVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGTAGDGSGTVTLVCS
NPPCETHETGTTNTATTSSATIGGGQVCSNPPCETHETGTTNTATTSSATIGGGQVCSNP
PCETHETGTTNTATTSSATIGGGQVCSNPPCETHETGTTNTATTSSATIGGGQVCSNPPC
ETHETGTTNTATTASSNMGGVQQVCSNPPCETHVTGTTNTATQASSNMNTEETGTVQSAR
SNPPCETHETGTTNTPSTATSNMGGDQTNTATGLVQRVCSNPPCETHETGTTNTATTATC
SMETGEGTAAQQTEEEAEGTSSTEVASTTAATVMAATTQGRAITTVTQSTPAPGPSVPSI
SSITEGVSTAASSTEEPMQTDEAAAGEPAPAEEPTAAMETQAEGEAAAATALNLPSELMS
EGQGATLMVTGLSDEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMNEGDATGD
QTTTIPIMLTQQDLAALVQQQQQLQEAQAAAQQASVDTSLPTEGLAPADSLNDPSVESNG
HNEMAASVTSAVASLLPRTTAETLAPSSTFAPSVSVASPAKLQAAATLAEVANGIEGEKQ
APQPTPVKPVVKKENQWFDVGIVKVTNMVVTHFYVPADDSQGDDDSGIIPDYSQMKKMEL
QPGTAYKFRVAGINACGRGTFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVT
SGKIIEYSVYLAIQSNQTTEAKASTPAQLAFMRVYCGPNPSCLVQSASLSNAHIDYTTKP
AIIFRIAARNEKGYGPATQVRWLQESGKDAASAKLAPKRPGTSPDTKPGPKKARTDQ
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggctccgcagtgaccgggaccactgcgtcggttctgcagccgcgatgg
aaaagggtcctcgggtggtccggtccggttccccggccaagacatggacacagagctgtg
gctataaaggagcttatggtcgtatttggcggcggaaacgaaggaattgttgacgagcta
catgtatacaacacagcaacaaaccagtggtttatcccagcggtccgcggtgatatccca
cctggttgtgctgcgtatggctttgtgtgtgatggcacaaggttgctggtgtttggtgga
atggtggaatatggaaagtacagcaacgatctttatgagctacaggccagcagatgggag
tggaaaaaactgaaagcaaaaaatcccaaaaacggtccccctccatgtcctcgtcttggc
cacagcttttcactggttggtaacaaatgctacctgtttggtggactggccaatgacagc
gaagacccaaaaaacaacattcccagatacctgaatgatttgtacacacttgagcttcgt
ccgggttcaagcgtggttggatgggatattccaatcacgtacggagttctgccacctcct
cgtgagagtcacactgctgtggtgtacacagagaaaacaaccaggaagtctcggttgata
atctatggaggaatgagcggttgtcgtctcggggatctgtggacacttgatattgatacc
ctgacatggaacaaaccaacagtaggtggcacagctccccttccacgaagtcttcactct
gccaccacaatcacaaacaagatgtatgtttttggtggatgggttcctttagtgatggat
gatgtcaaagtggccacacatgagaaagagtggaaatgcacaaacactctcgcatgccta
aatcttgactccatgtattgggaaacagtgttgatggatactcttgaagataacatcccc
agggcccgtgccggccactgtgctgtggccatcaactccaggctctatgtatggagtggt
cgtgatggttatcgtaaagcatggaataaccaagtctgttgtaaagacctttggtacctg
gaaacagatcggccacatgctcctgccagggtacagctagtccgtgccaacacaaactct
ctggaagtgagctggggtgcagtttccacagctgacacatatttgctgcagctgcagaag
tatgatattcctgcaaccccagcagcagcctccccagccacgagtgcaaccccatcacag
cctattaactctccaaaaagtcctgctcctgcagctgcagcaccctctgctcaaagttta
ccacagacggctgttttaaaggttgcagctcaacaatcagccactggtgcatctgttgtc
acagttcgtcccagtcagcctgggaaatcccccgtcactgtgacatctcttcctccaggt
gttcgaatggtcgtgcctacccaaaccacccaaggctcgccaattggtagtagtcctcag
atgagtggtatggcagctttagctgctgcggctgcagctacacagaagatcccaccctcg
tctgcaggcaccgtcctcaatgttcctgcaggtgccactattctcaaaacagttgctgtt
tctccaggcacaaccacaatgaaagtggcttcacctgtaatggtcagtaacccggccacc
cggatgttgaagactgctgcagcccaggtgggcatagcaactgcgtcctctcccaccaca
accagacccatcatcactgtgcacaagtctggtgctgtcacagtggctcagcaggctcag
gtggtgaccaccgtggtgggaggagtcaccaagaccatcaccctggtcaagagtccactc
acaatgggcggcagtggtactctgatctccaaccttggcaagatgatgtctgtggtacaa
accaagccagtgcagacatcagctgtcactggccaggcttccactaaccctctcacacag
atcatacagacaaagggttcgctcccagctggcaccatattgaagctggtaacttctgca
gatggcaaacccacaacgatcatcacaacatcccaggcaggaggcacaggaaacaagccc
acgatcctcaacataagtggagtctcacctgctactaccaagcagggcactaccatcatt
aagaccatccctatgtcggccatcatgacccagcctggagctacaggtgtgacgagcagt
gcaggtatgaaaacaccgataacaattcttaccacgaaggtaatgacctctggaactcct
ggtaaaatcatcactgcagtgcccaaactcaccactgctgctgggcagcagggactgacg
caggtggtattaaagggtgctcctggacaacctggcactattctgcgcactgtgcccatg
agcacggtgggtggtgttcgtcttgttactccagtcaccgtgtcagctgttaaacccact
gtcaccaccctggttgtcaaggggaccactggggtcaccactctgggcacagtcactggc
accgtgtccactaccttagcaggaggcacagctgacagttccagcgcctctctggtgaca
cccatcaccacattgggaactatcgccacgctgtccagccaggtcattagtccagctgcc
atcacagtgtcagctgctcagactagcttggcttctactgccacactttcctcacctact
atgacagtgcaaaaccagcccacacaggtgactctgatcacaactcccagtggggttgaa
gcccaaccagtgcaggatcttcctgtgtccatcctggcttcaccaacctctgaacagccc
agctccactgaagctggaacagctggagatggctctgggactgtaaccctggtctgctcc
aacccgccgtgtgagactcacgagaccggaaccaccaacacagccaccacctcctctgcc
accattggaggaggacaggtctgctccaaccccccatgtgagactcacgagaccggaacc
accaacacagcaaccacctcctctgccaccattggaggaggacaggtctgctccaacccc
ccatgtgagacccatgaaaccggaaccaccaacacagccaccacctcctctgccaccatt
ggaggaggacaggtctgctccaaccccccatgtgagactcacgagaccggaaccaccaac
acagcaaccacctcctctgccaccattggaggaggacaggtctgctccaaccccccgtgt
gagactcatgaaacggggacaactaacacagctactacagcttcatctaacatgggtgga
gtccagcaggtgtgttcaaacccaccgtgtgagacccatgtgacaggtaccaccaacaca
gccacacaagcttcatccaacatgaatacagaggagacgggcaccgtgcagagtgctcgc
tctaacccaccctgtgaaacccacgaaacggggaccaccaacactccgtccacagccacc
tccaacatgggaggggatcagaccaacaccgcaacaggcctggtccagagggtttgctcc
aacccaccatgcgaaacgcatgagactgggaccaccaacactgccaccactgctacctgc
agcatggagacaggtgaaggaacagctgcccagcagaccgaagaagaagcagaaggaacc
agcagcacagaagtagcttctaccactgcagcaactgtcatggccgccaccactcaaggc
agagccatcaccactgtcactcagtccacaccggccccggggccttcagttccttcaatt
tcatcaatcacagagggggtgagtactgctgccagctccacagaagaaccaatgcaaacg
gatgaggctgcagcaggagaacctgcacctgctgaggagccaacagcagctatggagaca
caagcagagggagaagcagcagctgcaacagccttgaacctgccttcagagctgatgtct
gagggtcagggagccactctgatggtgaccggactgtctgatgaagaactggctgtgact
gctgcagccgaagctgctgctcaggcagctgccactgaagaagcccaggccctcgccatc
caggctgttctccaagcggctcagcaagctgtaatgaatgaaggtgacgctactggagac
caaaccaccaccatccccatcatgctgacccagcaagatctcgcagcgttggtccagcag
cagcagcagctgcaggaggcccaggctgcggcccagcaggcctcagtagataccagctta
cccaccgagggcctcgcacccgccgacagcctcaacgatccgtctgttgaaagcaacgga
cataatgaaatggctgcctctgtcactagtgctgtggcatctctcctaccacgtaccacc
gcagagacactggctccatcaagtacatttgcaccatctgtatcggtagcaagtccagcc
aagctgcaagcagcagccactcttgcagaggttgctaatggcatcgagggagagaagcag
gcccctcagccaactccagtaaagcctgttgttaaaaaggagaaccagtggtttgatgtt
ggaattgtaaaagtgacaaacatggttgtcactcacttctacgtgccagcagatgattcc
cagggagacgacgactctggcatcataccagattacagtcagatgaagaaaatggagctg
cagccgggcacggcctacaagttccgtgttgcaggaatcaacgcttgtggccgtgggact
ttctctgaaatttctgctttcaagacttgcctaccaggttttccaggggcgccatgtgcc
atcaaaatcagcaagagtccagatggtgcccacctgacctgggagcctccctctgtgacg
tcaggaaaaatcattgagtactccgtgtacctggccatccagagcaaccagacaacagag
gccaaggcgtccaccccggcacagctagccttcatgcgggtgtattgtggacccaacccg
tcttgcttggtgcagtcggccagcctctccaacgctcacatcgactacaccactaagcca
gctatcatcttccgcatcgccgctcgcaacgagaagggctacggccctgctacccaagtt
cgatggcttcaggaatctgggaaagatgctgcttctgcaaaacttgctcctaaaagacca
ggcacctcccctgatactaagcctggtccaaagaaagcaagaacagaccagtga
DBGET
integrated database retrieval system
