Nematolebias whitei (Rio pearlfish): 119411788
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Entry
119411788 CDS
T08042
Name
(RefSeq) protein polybromo-1
KO
K11757
protein polybromo-1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119411788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119411788
03036 Chromosome and associated proteins [BR:
nwh03036
]
119411788
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119411788
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
119411788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
CTD12
Motif
Other DBs
NCBI-GeneID:
119411788
NCBI-ProteinID:
XP_037534640
LinkDB
All DBs
Position
7:29108914..29125072
Genome browser
AA seq
1628 aa
AA seq
DB search
MSTKRRRATSPCSSVSGGGDHDDNSSSTPGRKRRKVSNTNVPPVDTIAVCHELFNAVKDY
KDHHGRQLCEVFLRVPKRRNQPDYYGVISQPIDMTKIQYKLKSEEYTEVEQLTSDFQLMF
NNARSFYKSDREEYQAACKLWEVYLQTRNEFVQPGDGDDEEEDGDDVTDNSGVEYTSASS
LKEVLEQLLEAIVSHTDPSGRAVSELFQKLPSKVHYPDYYAIIKEPIDLRAIAQRIQAGY
YKTVNAMAKDVDLMAKNAKTYNEPGSQVFKDANTIKKIFIQRKTELEHAEPTKSSLRIRN
RRSGQGDRFPGAAPQYGSESEDDPVLSGSVCYDEGESEAESQSSSMEMSNPIFQLYEAVR
GARNNQGQVFSEPFQQLPSRREYPDYYQQIKTPISLQQIRAKMKNGEYESVELMEADLTL
MFENAKRYNMPTSSIYKRAFRLQQLMQAKKKELVRRDEEDGDSILSSDAGSVKRKSHKKN
VKKNRMKALYAAVIEARETSTNRRLCELFMVKPSKKDYPDYYNVILEPMDLKTIEYKIRN
ERYTTEEELIEDMKLMFRNARHYNEEGSQVYNDANVLEKILKDKRKELGPPPEEEDVGSP
KLKIRKSGVSPKKSKYLTPLQQKLNELYDAVRNFTDSRGRRLSTIFLRLPSRSELPDYYA
TIKKPIDMERVRSHMATGRYQDVEALFEDFALMFNNACIYNEPESLIYRDALMLHRVLLE
TRKQQERGEDTGPPAVGSLVRELIRNLFVSVMSHQDEEGRCYSDSLAEIPAVDPAAPEKP
PLNFDIIRMNVERGRYLRLDIFQEHVFEVLEKARRLHRTDSEAFEDAVELQQFFIRIRDE
LCKNGEILLSSALSFSVKHLHNDVEQEKREKIPREIEEDKQKIAEEEENKDRKEDLPKEE
WQSESESKRVYIQDCSFENRTYHVGEFVYVEPSEPNLKPHIVCIERLWEDEAGGKWLHGC
WFYRPSETFHLATRKFLEKEVFKSDYYNKAPFSKVLGKCVVIFVKDYFKMQPDGFKPEDV
YVCESRYAARNKSFKKIKIWAMPESSVKLVPRESPLPVVRVASMFAKPDLEKLTVSYIDS
GSFVEKEREDVPMEMNGSEPGCQHYEQLRFNSMWFKVGDCIYIRSHGLSKPRAARIEKLW
VQNGVTFFFGPIFIHPEETVHEPTKMFYKREVFLSHLEETLPMTCVIGKCAVSCFKDYLS
CRPTEYSEEDVLLCESRYHEAEKQMKKFKGLKRFSYSSKVLEDEVFYFRKLVVPQKEASP
ILNKKIDELESKLADLEDADDDMEEIDEDEDGPSTPSLPQMQTSLSSDMDMMPFTPSQAT
PKIKGLAKKEGAKRKINMSGYILFSSEMRAVIKARHPDFSFGELSRLVGTEWRNLDASKK
AEYEERAAKIVEQQERDRPFYKHGSPRAGTPVGALMGVVPSPSTMGMINQTMTPVSGMMG
AYGPPYMPMQGPHEGLLSVAPMPHHLPPHHLQQGMPGYPGIPHQGLMGGGMNGMAGSPGQ
GNFIQQPGMFSPGQHAPPPYPGQGQPSHLQPTTPMFVAPPPKTQRVLHSEAYLKYIEGLN
SESSTVSKWDQTLKAQRRDAHLTKEQESRLPAHWLKSKGAHTTMVDALWRLRDLMLRDSL
NICQAYNQ
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccaagcgaagacgagccacttctccctgcagcagcgtcagtggtgggggagac
cacgacgataactcttcatcgactcccggacgaaaaagaagaaaagtttccaataccaat
gttcctcctgttgatacgattgctgtttgtcatgagctgttcaatgctgtcaaagactac
aaggatcatcacgggaggcaactttgtgaagttttccttcgggtgccaaaaaggaggaat
cagcctgattattacggagtgatctcccagccgattgatatgacaaagattcagtacaag
ctgaagtcagaagagtatactgaagtggagcagcttacttcagattttcaactcatgttt
aataacgctcggtcattctacaagagtgacagggaagaatatcaagcagcatgtaagctg
tgggaagtatatttgcaaacaaggaatgagtttgtgcagcctggagatggagatgatgaa
gaggaagatggtgatgacgtgactgataattctggagttgaatatacatcagctagcagc
ttgaaagaagtactagagcaactcttggaggctatagtgtcacacaccgatccctcaggg
cgagcagtcagcgaacttttccaaaaactgccttctaaagtgcattacccagactactat
gccatcataaaggagccaatagatctgagagcaatcgctcagaggatacaggctggatac
tataaaactgttaatgctatggccaaggatgttgacctgatggccaaaaatgccaaaaca
tacaatgaaccaggatctcaggtttttaaggatgctaacacaataaagaaaattttcatc
caacgcaaaactgaactcgaacatgctgagcctactaaatctagcctccgcatcagaaat
cgccgatctgggcagggcgatcgatttcctggtgctgctcctcagtacggttcagagagt
gaggatgaccctgttctttcaggatctgtgtgctatgacgagggcgagtcagaggccgag
agccagagttcaagtatggagatgagcaaccccatcttccaactttacgaagctgtgaga
ggagccaggaacaatcagggacaggttttctctgaaccttttcagcaactcccctctcgc
agagagtatcctgattattatcagcagatcaaaacaccaatttctctgcaacagatcagg
gcgaagatgaagaatggtgaatatgaaagtgtggaactgatggaggcagacctcactttg
atgtttgagaatgcaaagcggtacaacatgccaacctcaagcatttacaaacgagctttc
aggcttcagcagcttatgcaggcgaagaaaaaggaacttgtgaggagagatgaagaagat
ggagacagcattttatcctctgatgcagggagcgtcaaaaggaaaagccataagaaaaat
gtcaaaaagaaccggatgaaagccctgtatgctgccgtgatcgaggccagggagaccagt
accaatcgacgtctctgtgagctttttatggttaaaccatccaagaaggactaccctgac
tactacaacgtcattctcgaaccgatggacctgaaaaccatcgagtacaaaattcgaaat
gaacgctataccacagaagaagagctaatagaagacatgaagttgatgttccgtaatgct
cggcattataacgaagagggatctcaggtgtataatgatgcaaacgttttggagaagatc
ctgaaagacaaacgcaaggagttgggacctccaccggaggaggaggatgtgggatcacct
aaactgaaaataagaaaaagtggcgtttctccaaagaagtccaaatacctcacccctctc
cagcagaagttaaatgagctctacgatgctgtgcgaaattttaccgacagccgaggtcga
cgtttaagcacaatctttctccgtctgccttcccgttccgagctgcccgactactatgcc
acaatcaagaaacccatcgacatggagcgcgtccgaagccatatggcaacaggccggtac
caagacgtcgaagctctctttgaagacttcgctctcatgttcaacaatgcctgcatctac
aatgagccagagtctctgatctatcgagacgctctaatgttgcatcgcgtgttgctggag
acacgaaagcagcaggagcgaggggaggacaccggtcctcctgctgtgggatctctggtg
cgagagctcatcaggaacctgtttgtgtctgtaatgagccaccaagacgaagagggtcgt
tgctacagtgactcgctggctgagatccccgctgtggatccagctgccccggaaaagcca
ccactcaactttgatatcataagaatgaatgtggagcgtggtcgatacttgagactggac
atctttcaggagcacgtgtttgaagtgctggagaaggcaagaaggctacacaggacagac
tctgaggcatttgaggatgcagtggagcttcagcagtttttcattcgaatcagggatgag
ctttgtaagaatggagagattttactctcctctgcgctcagcttttcagtaaaacacctg
cataacgacgtagagcaagaaaagcgggagaaaatccccagagagatcgaggaggataag
caaaaaatagcagaagaggaggaaaacaaagacaggaaagaagacttgcccaaggaggag
tggcagtctgagtccgagtcaaagcgtgtgtacattcaggactgcagctttgaaaacagg
acttaccacgtaggagaatttgtctatgtggagccatcagaaccaaacctgaagcctcat
attgtctgtatcgaacgtctgtgggaagatgaagcaggtgggaagtggcttcatggctgc
tggttctatagacccagtgagacctttcatcttgccactcgcaaattcctggaaaaagag
gtcttcaaaagtgactattacaacaaagcacccttcagcaaagttttgggcaaatgtgtg
gtcatttttgtgaaggattatttcaaaatgcagcccgatggctttaaacccgaggatgtc
tacgtgtgtgagtcacgctacgctgccagaaataagtctttcaagaagatcaaaatctgg
gccatgcctgagagttctgtgaagttggtaccacgggagagtccgcttcccgttgtccgt
gttgcttcaatgtttgccaagcctgacctggaaaaactcacagtgtcatacattgacagt
ggcagttttgtggaaaaggagagggaagatgtcccaatggagatgaatggatctgagcct
ggctgccagcattacgaacagctacgcttcaacagcatgtggtttaaagtgggtgactgc
atttacatccgatcacatggtttgtcaaaacctcgggctgccaggatagaaaagctgtgg
gtacagaatggagttaccttcttctttggacccatcttcattcatcctgaggaaactgtg
catgaaccaacaaagatgttctacaagagagaagtgtttctgagtcatctggaggagacc
ttgcccatgacttgtgtcataggcaaatgtgcagtgtcctgctttaaggactacctgtca
tgcagaccaaccgagtattcagaggaagacgttctgctgtgcgagagccgctaccatgag
gccgagaaacaaatgaaaaagttcaaaggcctgaaacgtttctcatattcgtccaaagtg
ctcgaggatgaggtcttttacttcaggaagctggttgtgccgcaaaaggaagcttcaccc
attttgaacaagaaaattgatgagcttgagagtaaactggcagacttggaggatgcagat
gatgacatggaagaaatcgatgaagatgaagatggtccatccacgccttctttgcctcaa
atgcaaacctctctttcaagcgacatggatatgatgcccttcacaccttcccaagccact
cctaagataaaaggtttagcgaagaaggaaggagccaagaggaagatcaacatgagcggt
tacatcctgttcagcagtgaaatgcgagcagtcatcaaagcccgacacccagatttttct
ttcggagagctgagtcgattggtaggcacagagtggagaaacctcgacgcttccaagaaa
gcagagtatgaagagcgcgcagccaaaatagtggaacagcaagagcgtgataggccgttc
tacaagcatggctcccctagagcaggtacccctgtaggggcactgatgggggtggtgcct
tcacccagcactatgggaatgataaaccagaccatgacacctgtgtcaggcatgatggga
gcttatggcccaccttacatgcccatgcagggcccgcatgagggtttgcttagtgtggcc
ccaatgccacatcacctacctcctcaccatctccagcaaggtatgcctggataccctggc
atacctcatcagggtttgatgggcggagggatgaatggcatggcaggaagtccaggacaa
ggaaattttatccagcagcctgggatgttcagtccagggcagcatgcccctccaccatat
ccaggacagggccagccatctcatttgcagcctaccactcccatgtttgtggctccacct
ccaaagacacaaagggtgctccactcagaggcctacctgaagtacattgagggtttaaat
tcagagtctagcactgtcagcaagtgggaccaaacgctcaaagctcaaagacgagatgct
cacttgactaaagagcaggagagtcgacttccagcacactggctgaagagcaaaggagct
cacactaccatggtggacgcactgtggcgtttacgtgatttaatgctgagagactcgctg
aatatttgtcaggcttacaaccagtga
DBGET
integrated database retrieval system