KEGG   Nematolebias whitei (Rio pearlfish): 119411788
Entry
119411788         CDS       T08042                                 
Name
(RefSeq) protein polybromo-1
  KO
K11757  protein polybromo-1
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119411788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nwh03021]
    119411788
   03036 Chromosome and associated proteins [BR:nwh03036]
    119411788
Transcription machinery [BR:nwh03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     119411788
Chromosome and associated proteins [BR:nwh03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    119411788
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1 CTD12
Other DBs
NCBI-GeneID: 119411788
NCBI-ProteinID: XP_037534640
LinkDB
Position
7:29108914..29125072
AA seq 1628 aa
MSTKRRRATSPCSSVSGGGDHDDNSSSTPGRKRRKVSNTNVPPVDTIAVCHELFNAVKDY
KDHHGRQLCEVFLRVPKRRNQPDYYGVISQPIDMTKIQYKLKSEEYTEVEQLTSDFQLMF
NNARSFYKSDREEYQAACKLWEVYLQTRNEFVQPGDGDDEEEDGDDVTDNSGVEYTSASS
LKEVLEQLLEAIVSHTDPSGRAVSELFQKLPSKVHYPDYYAIIKEPIDLRAIAQRIQAGY
YKTVNAMAKDVDLMAKNAKTYNEPGSQVFKDANTIKKIFIQRKTELEHAEPTKSSLRIRN
RRSGQGDRFPGAAPQYGSESEDDPVLSGSVCYDEGESEAESQSSSMEMSNPIFQLYEAVR
GARNNQGQVFSEPFQQLPSRREYPDYYQQIKTPISLQQIRAKMKNGEYESVELMEADLTL
MFENAKRYNMPTSSIYKRAFRLQQLMQAKKKELVRRDEEDGDSILSSDAGSVKRKSHKKN
VKKNRMKALYAAVIEARETSTNRRLCELFMVKPSKKDYPDYYNVILEPMDLKTIEYKIRN
ERYTTEEELIEDMKLMFRNARHYNEEGSQVYNDANVLEKILKDKRKELGPPPEEEDVGSP
KLKIRKSGVSPKKSKYLTPLQQKLNELYDAVRNFTDSRGRRLSTIFLRLPSRSELPDYYA
TIKKPIDMERVRSHMATGRYQDVEALFEDFALMFNNACIYNEPESLIYRDALMLHRVLLE
TRKQQERGEDTGPPAVGSLVRELIRNLFVSVMSHQDEEGRCYSDSLAEIPAVDPAAPEKP
PLNFDIIRMNVERGRYLRLDIFQEHVFEVLEKARRLHRTDSEAFEDAVELQQFFIRIRDE
LCKNGEILLSSALSFSVKHLHNDVEQEKREKIPREIEEDKQKIAEEEENKDRKEDLPKEE
WQSESESKRVYIQDCSFENRTYHVGEFVYVEPSEPNLKPHIVCIERLWEDEAGGKWLHGC
WFYRPSETFHLATRKFLEKEVFKSDYYNKAPFSKVLGKCVVIFVKDYFKMQPDGFKPEDV
YVCESRYAARNKSFKKIKIWAMPESSVKLVPRESPLPVVRVASMFAKPDLEKLTVSYIDS
GSFVEKEREDVPMEMNGSEPGCQHYEQLRFNSMWFKVGDCIYIRSHGLSKPRAARIEKLW
VQNGVTFFFGPIFIHPEETVHEPTKMFYKREVFLSHLEETLPMTCVIGKCAVSCFKDYLS
CRPTEYSEEDVLLCESRYHEAEKQMKKFKGLKRFSYSSKVLEDEVFYFRKLVVPQKEASP
ILNKKIDELESKLADLEDADDDMEEIDEDEDGPSTPSLPQMQTSLSSDMDMMPFTPSQAT
PKIKGLAKKEGAKRKINMSGYILFSSEMRAVIKARHPDFSFGELSRLVGTEWRNLDASKK
AEYEERAAKIVEQQERDRPFYKHGSPRAGTPVGALMGVVPSPSTMGMINQTMTPVSGMMG
AYGPPYMPMQGPHEGLLSVAPMPHHLPPHHLQQGMPGYPGIPHQGLMGGGMNGMAGSPGQ
GNFIQQPGMFSPGQHAPPPYPGQGQPSHLQPTTPMFVAPPPKTQRVLHSEAYLKYIEGLN
SESSTVSKWDQTLKAQRRDAHLTKEQESRLPAHWLKSKGAHTTMVDALWRLRDLMLRDSL
NICQAYNQ
NT seq 4887 nt   +upstreamnt  +downstreamnt
atgtcaaccaagcgaagacgagccacttctccctgcagcagcgtcagtggtgggggagac
cacgacgataactcttcatcgactcccggacgaaaaagaagaaaagtttccaataccaat
gttcctcctgttgatacgattgctgtttgtcatgagctgttcaatgctgtcaaagactac
aaggatcatcacgggaggcaactttgtgaagttttccttcgggtgccaaaaaggaggaat
cagcctgattattacggagtgatctcccagccgattgatatgacaaagattcagtacaag
ctgaagtcagaagagtatactgaagtggagcagcttacttcagattttcaactcatgttt
aataacgctcggtcattctacaagagtgacagggaagaatatcaagcagcatgtaagctg
tgggaagtatatttgcaaacaaggaatgagtttgtgcagcctggagatggagatgatgaa
gaggaagatggtgatgacgtgactgataattctggagttgaatatacatcagctagcagc
ttgaaagaagtactagagcaactcttggaggctatagtgtcacacaccgatccctcaggg
cgagcagtcagcgaacttttccaaaaactgccttctaaagtgcattacccagactactat
gccatcataaaggagccaatagatctgagagcaatcgctcagaggatacaggctggatac
tataaaactgttaatgctatggccaaggatgttgacctgatggccaaaaatgccaaaaca
tacaatgaaccaggatctcaggtttttaaggatgctaacacaataaagaaaattttcatc
caacgcaaaactgaactcgaacatgctgagcctactaaatctagcctccgcatcagaaat
cgccgatctgggcagggcgatcgatttcctggtgctgctcctcagtacggttcagagagt
gaggatgaccctgttctttcaggatctgtgtgctatgacgagggcgagtcagaggccgag
agccagagttcaagtatggagatgagcaaccccatcttccaactttacgaagctgtgaga
ggagccaggaacaatcagggacaggttttctctgaaccttttcagcaactcccctctcgc
agagagtatcctgattattatcagcagatcaaaacaccaatttctctgcaacagatcagg
gcgaagatgaagaatggtgaatatgaaagtgtggaactgatggaggcagacctcactttg
atgtttgagaatgcaaagcggtacaacatgccaacctcaagcatttacaaacgagctttc
aggcttcagcagcttatgcaggcgaagaaaaaggaacttgtgaggagagatgaagaagat
ggagacagcattttatcctctgatgcagggagcgtcaaaaggaaaagccataagaaaaat
gtcaaaaagaaccggatgaaagccctgtatgctgccgtgatcgaggccagggagaccagt
accaatcgacgtctctgtgagctttttatggttaaaccatccaagaaggactaccctgac
tactacaacgtcattctcgaaccgatggacctgaaaaccatcgagtacaaaattcgaaat
gaacgctataccacagaagaagagctaatagaagacatgaagttgatgttccgtaatgct
cggcattataacgaagagggatctcaggtgtataatgatgcaaacgttttggagaagatc
ctgaaagacaaacgcaaggagttgggacctccaccggaggaggaggatgtgggatcacct
aaactgaaaataagaaaaagtggcgtttctccaaagaagtccaaatacctcacccctctc
cagcagaagttaaatgagctctacgatgctgtgcgaaattttaccgacagccgaggtcga
cgtttaagcacaatctttctccgtctgccttcccgttccgagctgcccgactactatgcc
acaatcaagaaacccatcgacatggagcgcgtccgaagccatatggcaacaggccggtac
caagacgtcgaagctctctttgaagacttcgctctcatgttcaacaatgcctgcatctac
aatgagccagagtctctgatctatcgagacgctctaatgttgcatcgcgtgttgctggag
acacgaaagcagcaggagcgaggggaggacaccggtcctcctgctgtgggatctctggtg
cgagagctcatcaggaacctgtttgtgtctgtaatgagccaccaagacgaagagggtcgt
tgctacagtgactcgctggctgagatccccgctgtggatccagctgccccggaaaagcca
ccactcaactttgatatcataagaatgaatgtggagcgtggtcgatacttgagactggac
atctttcaggagcacgtgtttgaagtgctggagaaggcaagaaggctacacaggacagac
tctgaggcatttgaggatgcagtggagcttcagcagtttttcattcgaatcagggatgag
ctttgtaagaatggagagattttactctcctctgcgctcagcttttcagtaaaacacctg
cataacgacgtagagcaagaaaagcgggagaaaatccccagagagatcgaggaggataag
caaaaaatagcagaagaggaggaaaacaaagacaggaaagaagacttgcccaaggaggag
tggcagtctgagtccgagtcaaagcgtgtgtacattcaggactgcagctttgaaaacagg
acttaccacgtaggagaatttgtctatgtggagccatcagaaccaaacctgaagcctcat
attgtctgtatcgaacgtctgtgggaagatgaagcaggtgggaagtggcttcatggctgc
tggttctatagacccagtgagacctttcatcttgccactcgcaaattcctggaaaaagag
gtcttcaaaagtgactattacaacaaagcacccttcagcaaagttttgggcaaatgtgtg
gtcatttttgtgaaggattatttcaaaatgcagcccgatggctttaaacccgaggatgtc
tacgtgtgtgagtcacgctacgctgccagaaataagtctttcaagaagatcaaaatctgg
gccatgcctgagagttctgtgaagttggtaccacgggagagtccgcttcccgttgtccgt
gttgcttcaatgtttgccaagcctgacctggaaaaactcacagtgtcatacattgacagt
ggcagttttgtggaaaaggagagggaagatgtcccaatggagatgaatggatctgagcct
ggctgccagcattacgaacagctacgcttcaacagcatgtggtttaaagtgggtgactgc
atttacatccgatcacatggtttgtcaaaacctcgggctgccaggatagaaaagctgtgg
gtacagaatggagttaccttcttctttggacccatcttcattcatcctgaggaaactgtg
catgaaccaacaaagatgttctacaagagagaagtgtttctgagtcatctggaggagacc
ttgcccatgacttgtgtcataggcaaatgtgcagtgtcctgctttaaggactacctgtca
tgcagaccaaccgagtattcagaggaagacgttctgctgtgcgagagccgctaccatgag
gccgagaaacaaatgaaaaagttcaaaggcctgaaacgtttctcatattcgtccaaagtg
ctcgaggatgaggtcttttacttcaggaagctggttgtgccgcaaaaggaagcttcaccc
attttgaacaagaaaattgatgagcttgagagtaaactggcagacttggaggatgcagat
gatgacatggaagaaatcgatgaagatgaagatggtccatccacgccttctttgcctcaa
atgcaaacctctctttcaagcgacatggatatgatgcccttcacaccttcccaagccact
cctaagataaaaggtttagcgaagaaggaaggagccaagaggaagatcaacatgagcggt
tacatcctgttcagcagtgaaatgcgagcagtcatcaaagcccgacacccagatttttct
ttcggagagctgagtcgattggtaggcacagagtggagaaacctcgacgcttccaagaaa
gcagagtatgaagagcgcgcagccaaaatagtggaacagcaagagcgtgataggccgttc
tacaagcatggctcccctagagcaggtacccctgtaggggcactgatgggggtggtgcct
tcacccagcactatgggaatgataaaccagaccatgacacctgtgtcaggcatgatggga
gcttatggcccaccttacatgcccatgcagggcccgcatgagggtttgcttagtgtggcc
ccaatgccacatcacctacctcctcaccatctccagcaaggtatgcctggataccctggc
atacctcatcagggtttgatgggcggagggatgaatggcatggcaggaagtccaggacaa
ggaaattttatccagcagcctgggatgttcagtccagggcagcatgcccctccaccatat
ccaggacagggccagccatctcatttgcagcctaccactcccatgtttgtggctccacct
ccaaagacacaaagggtgctccactcagaggcctacctgaagtacattgagggtttaaat
tcagagtctagcactgtcagcaagtgggaccaaacgctcaaagctcaaagacgagatgct
cacttgactaaagagcaggagagtcgacttccagcacactggctgaagagcaaaggagct
cacactaccatggtggacgcactgtggcgtttacgtgatttaatgctgagagactcgctg
aatatttgtcaggcttacaaccagtga

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