Nematolebias whitei (Rio pearlfish): 119411960
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Entry
119411960 CDS
T08042
Symbol
zgc:113307
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nwh00535
]
119411960 (zgc:113307)
Proteoglycans [BR:
nwh00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
119411960 (zgc:113307)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
119411960
NCBI-ProteinID:
XP_037534860
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Position
7:43798255..43802129
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AA seq
366 aa
AA seq
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MALLLCGVLVLLCGFDTAHTLVLTDMDYGGVPLWINRLLGEPSVLSLQGRMDPSWFQANN
PESCSDQCVCPIQWPTSLYCDHRGLKDIPERLPDRTQYLFLQGNNISSLSSSILANITGL
RWLIVDNNQLQSDKLEQACLQNQTQLRYFFANRNQLTSVPSALPAGLRQLRLAHNRISSI
DPGAFHNLSDLTLLLLQGNRLQMIAEGDLKGLVSLNLLDLSGNFFSAVPKHLPPSVQQLY
LSNNSLSGLDEDGFVDLLNLKYLRLSHCRLQSRHVHPRAFNLSSLVELDLSYNNLTSIPT
VPSTLQYLYLEANYIQEFNVTSFCRDVGPLSYSRMKILRLDGNKVTYHQLPPDWVYCLRV
LQKFYI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctgctctgtggcgtgttggtgctgctgtgtgggtttgataccgcccacaca
ttagtcctcactgacatggattatggaggcgttcctctgtggattaaccgcctgctgggc
gagcccagtgttttgagtctgcagggacggatggaccctagctggttccaggctaacaac
cctgagtcctgctccgaccagtgtgtttgtcccatccagtggcccacgtcgctctactgt
gaccacagaggcctaaaagacatccctgaaaggctgccagacagaacccagtacttgttt
ttacagggtaacaacatctcgtccctgtcctcctccatcctggccaacatcacgggtcta
cgctggctcatcgtagacaacaaccagctgcagagcgacaagctggagcaggcctgcctg
cagaaccagacgcagctgcggtacttcttcgccaatcgtaaccagttgacctcggtgccc
agtgctctgccagctgggctcagacagctgcgactggcccacaaccgtatcagcagcatc
gacccaggagctttccacaacctgagcgatctgacgctgcttttactgcaaggaaacagg
ctgcagatgatcgcagagggcgaccttaaaggtttagtcagtctcaatctactggacctc
agtggaaatttcttctcggctgttcccaaacatttacctccttcagtccagcaactttat
ctgtcgaacaactctctctctggtctggacgaggacggttttgtggacctgctcaacctg
aagtacctgcgtctcagtcactgtcgcctgcagagccgccacgttcatccacgagccttt
aacctctccagtctggtggagctggacctctcttacaacaacctgacctccatccccaca
gtccccagcactctgcagtacctctacctggaggccaattacattcaagagtttaacgtg
acgagtttctgcagagacgttggacccctttcctactccaggatgaagatcctacgattg
gacggaaacaaagtgacctaccaccagctcccccccgactgggtttactgcctgcgagtg
cttcagaagttttacatatga
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