Nematolebias whitei (Rio pearlfish): 119411995
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Entry
119411995 CDS
T08042
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119411995 (chd5)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119411995 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
Motif
Other DBs
NCBI-GeneID:
119411995
NCBI-ProteinID:
XP_037534895
LinkDB
All DBs
Position
7:complement(46106347..46176310)
Genome browser
AA seq
1996 aa
AA seq
DB search
MPGSLSNGDEGLDDMDFEDDMPDEDDEGERNTVPLRPLASFFSDDDMLKQQKKKPKKIKE
GKIPKVKKRKKEGGLQTRVDSDLDETSEVEEERECPEIGSESESSAYGLAKKKKKKPKEK
KPRKKKRDEDDDDDNDDDGNMKEPKSSSQLMHEWGLEDVQYSFTEDDYKTITNYKAFSQF
LRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVAQPTS
VSSSQLSSQQGPIKKAKTKEGKGPGVRKKNKTVKEAKKKPKPKKNKSKLGQSGKKKKASS
SDEDFLEESDFDDISIHSASVLSDTLGAATRKKARRGRKKRKKEDGDGYETDHQDYCEVC
QQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEDDEEEAAGE
EEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKGKVQ
RILHWRWGEPPLPAEPPPGPDGKPTDPLTKPPLKGRSEREFFVKWAGLSYWHCSWVSELQ
LELYHTVMYRNYQRKNDMDEPPPFDYGSGEEELNNEKRKSKDPQYAVMEERFYRYGIKPE
WMVIHRIVNHSFDKDGDAHYLIKWRDLPYDQCTWEADEFDVPEYDIHKAFYWDHREQILG
EDQRPLVVRKGNKLKEDYPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEGLNW
LRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEM
WAPDFYVVTYTGDKDSRATIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSYELIT
IDQAILGSVTWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLL
NFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV
ELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLP
NGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKYERI
DGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHNDIQA
FSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELD
DILKFGTEELFKDEMEAARAMGDNKDGEEGNVIHYDDDAISKLLDRSQDATEDTEIQNMN
EYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKG
KRVRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKNEK
DKPLPPLLARVGGSIEVLGFNTRQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEREF
RAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKL
SSPDLIPIGMELKKLTESVSSDSNTPVPASPVATQPSTPIPPGTESLVGNAEDKETTEQD
RKKSSEQEASSAEPASAPEKAADSEESKASSEEKTEDERNRSKSPTAKAEPCAHSKESAF
KPTELPSSHTSPKTDPCKEAEKSSEKGDVGSPREKNEDKENKPDDVKSEAALEGRLNGDK
DSLDELDESRKEEKNGFKAKFMFNIADGGFTELHTLWQTEERAARSSGKIHDIWHRRHDY
WLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEIHKGNYLEMKNKFLARRFKLLEQALVI
EEQLRRAAYLNMTQDPSHPAMALSTRFTEVECLAEYHQHLSKESLAGNKPANAVLHKVLN
QLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPLQQPFSQGGFG
CSQMYSSTFGGGFRGPGGQPMVNYSQMPLGPYVSVSSNAPLTPTSHLDKKALDSLRDVAT
PELKSGKSSDVICIED
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atgccgggctcgctgagtaatggagacgagggactggacgacatggattttgaagacgat
atgccagatgaggacgatgaaggtgagcgcaacactgttcccctcaggcccctcgccagc
ttcttctctgacgacgacatgctcaaacagcagaagaagaagcccaaaaaaattaaagag
gggaaaatacccaaagttaagaagaggaaaaaagagggaggactccagacaagagtggac
agtgacctggacgagacctcggaggtggaggaggaacgggaatgccccgagatcggctct
gagagcgagagcagcgcgtacggcctcgccaaaaagaagaagaaaaaacccaaggagaag
aagcccaggaagaaaaagagagatgaggatgacgacgatgataacgatgatgacggcaac
atgaaagaacccaagtcctccagccagttgatgcatgaatggggtctggaggacgttcag
tacagcttcactgaggacgactacaaaactatcaccaactacaaggctttcagccaattc
cttaggccgctcattgccaagaagaatccgaagattcccatgtcaaagatgatgacggtg
ttaggggccaagtggcgcgagttcagtgccaacaacccgttcaaaggcgcatctgccacc
gctgtggccgccgcggtggctgccgccgtggaaacagtcactgtagctcagccaacatct
gtcagcagcagccagctgagctcccagcaagggccaatcaaaaaagccaaaaccaaagaa
ggaaaaggaccaggagtaagaaagaaaaacaagactgtgaaagaagcaaagaagaaaccg
aagcccaaaaagaacaaatcaaagttgggtcagagtgggaagaagaagaaagcctcctcg
agtgacgaggactttctggaggagtcggactttgatgacatcagcatccacagtgcctct
gtgctttctgatactctgggagccgccaccaggaaaaaggcccggcgtgggcggaaaaaa
aggaaaaaggaggacggtgacggctatgagacagaccaccaggactactgtgaggtttgt
cagcaggggggagaaatcatcctgtgtgacacctgtccaagagcctaccacctggtgtgt
ctggacccggagctggagaaagcaccggagggaaagtggagctgtccacactgtgagaag
gagggaatccagtgggaggccaaagatgaagaggacgatgaggaggaagctgcaggtgag
gaggaggatgaccacatggagttctgcagagtgtgtaaagatggaggagagcttctgtgc
tgcgacacctgcccgtcgtcctaccacatccactgcctcaacccgcctcttcctgaaatc
ccaaacggggagtggctgtgtcctcgctgcatgtgtccgcctcttaaaggtaaagttcag
aggattctgcactggaggtggggagagcccccgctgccagcggagccgcctccaggccct
gatggcaaaccgaccgatccgttgaccaagcccccgctcaagggacgctcagagagggag
ttcttcgtgaagtgggctggcctttcgtactggcactgttcctgggtcagcgagctgcag
ttagagctgtaccacacggtcatgtatcggaactaccagcggaagaacgacatggacgag
ccgccgccgttcgactacgggtcgggagaggaggagctcaacaacgagaagaggaagagc
aaagacccccagtatgctgtgatggaggagcgcttctaccgctacggcatcaaaccagag
tggatggtcatccaccggatagtcaaccacagttttgataaggacggtgatgcacattac
ctgatcaaatggagagacctaccgtacgatcagtgcacctgggaggcagatgaattcgac
gtcccagaatatgacattcacaaagctttctactgggaccacagagagcagattttaggc
gaggaccagcgccctcttgtggtaaggaagggaaataaactaaaagaggactacccaaaa
agagaggttccccctgatgcccctatcatagatccaaccattaagtttgagcaccagccc
tggtacattaacgccaccgggggaacgctgcacccatatcagctcgagggtctgaactgg
ttgagattttcctgggctcaggggacggataccatcctggctgatgaaatgggcctagga
aagacggtgcagacaatagtttttctctactcactgtataaagagggtcactctaagggg
cctttcttggtgagcgcacctctctccacaatcatcaactgggagagagagttcgagatg
tgggctccggatttctacgtggtgacatacacgggagacaaagacagcagggcaactatc
agggaaaatgagttcacctttgaagacagcgcagtgaaatctggacggaaggtgtttcgc
atgaagaaagacactcctatcaagttccacgtgttgctgacttcttacgagctgatcact
atagatcaagccattctgggctccgtcacctgggcctgtctggttgtagacgaggcccac
agactgaaaaacaaccaatcaaagtttttcagaatcctcaacgggtataagatctactac
aagctgctgctcactggaactcccctgcagaacaacctggaggagctgttccatctgctt
aacttcctcaccccggagcgtttcaacaacttggaaggcttcctggaggagtttgcagac
atctctaaagaggaccagatcaagaaactccatgatcttctcggacctcacatgctcagg
aggctgaaagccgatgtgttcaagaacatgcctgcaaagactgagctcattgtcagagtg
gagctcagtcccatgcaaaagaaatattacaagtttatcttgacgcgaaactttgaggct
ctgaactccaaaggtggagggaaccaggtgtctctgctcaacatcatgatggacctgaag
aagtgctgcaaccacccctacctgttccccgtggctgccgtggaggctcctgttttaccc
aatggttcttatgatggtaatctactggtgaagtcctcaggaaaactaacgttgcttcag
aaaatgctgaaaaaactcaaagatgaaggacacagagttcttattttctctcagatgaca
aagatgctggatctactagaggattttctggagtttgaaggctataaatatgaacggatt
gatggggggattaccggaggcctgcgacaggaagccattgaccgattcaacgccccgggt
gcgcagcagttctgcttcttgctttcaacacgagccggaggtcttggcatcaacctggcc
agtgcagacaccgtcatcatctatgactccgactggaatccccacaatgacatccaagct
ttcagcagagcccaccgcatcggccagaacaagaaagtgatgatctaccgctttgtgact
cggggctcggtggaggagagaatcactcaggtagcaaagagaaaaatgatgctgactcac
ctggtggtgcggcccggcctgggctcgaaaacaggctcaatgtccaaacaagagctggat
gacatcctcaagtttggaaccgaggagcttttcaaggatgaaatggaggcggcacgagca
atgggtgacaacaaagatggcgaggagggaaatgtgattcactatgacgatgatgccatt
tccaagctgctggaccggagccaggacgcgaccgaggacacagagatacagaacatgaac
gagtacctgagctccttcaaggtggctcagtatgttgtgaaagaagaagacggagaggag
gaggtggagcgagagatcatcaagcaggaggagaacgtggaccctgactactgggagaaa
ctcctccgccatcactacgagcagcagcaggaggacctggctcgaaacctgggcaaaggc
aaacgcgttcggaagcaggtcaactacaacgatacgacccaggaggaccaagagtggcag
gatgatctttcagacaatcagtcggagtactccgtggggtccgaggacgaggacgaagac
tttgaagagaggcctgaaggtggacgcagacagtcccgtcggcagctcaagaatgagaaa
gacaaacctcttccacccttactggcacgagtcggagggagcatcgaggtcctggggttc
aacacccgtcagaggaaggccttccttaacgccatcatgcgctggggcatgcctcctcaa
gacgccttcaactcgcactggctggttcgggacctcagagggaaaagtgagcgggagttc
agggcttatgtgtctctatttatgagacatttatgtgagccaggcgccgacggagcagag
acctttgctgatggagtcccccgcgagggcctgtctcgtcagcacgttctcaccaggatc
ggcgtcatgtcgcttgtcaggaaaaaggtgcaggagtttgaacatgtaaacgggaagctg
agctctccagatctgattcctattgggatggagctgaagaaactcactgaaagtgtgtct
tctgattccaacacccctgtgccagccagccctgtggccacgcagcccagcacccccatc
ccaccagggacggagtctttggtgggtaacgctgaggacaaggagaccacagaacaagac
agaaaaaaatcatcagagcaggaagcttccagtgcagagccagcctctgcacctgagaaa
gctgctgacagtgaggagagcaaggccagctcagaggagaaaacagaagatgagaggaac
agaagcaaatcccccaccgcaaaggccgagccgtgcgctcactcaaaagagtccgctttc
aagccgacagagctgccatccagtcatacttcaccgaagacggacccctgcaaagaagct
gagaagtcctctgagaaaggagacgttggctctcctcgagaaaaaaacgaagacaaagaa
aataagccagatgacgtgaagagcgaagctgcattagagggtcgactgaatggagacaaa
gactctttggatgagctggatgagagcagaaaagaggagaaaaatggattcaaagccaag
tttatgtttaatattgctgatggaggttttactgagttgcacaccctctggcaaacagag
gagcgagcggcgcggtcttctggaaaaatacacgacatctggcatcgtcgccatgactac
tggctgctggctggcatcgtaacacatggctatgctcgctggcaagacattcagaatgac
ccgcgttacgctattctgaatgagcccttcaaaactgagatacacaagggcaactactta
gagatgaagaacaagttcctggcgcgccgctttaagctgttagagcaggctctggtgatc
gaggagcagctgcggcgggcagcttacctcaacatgacccaggaccccagccacccggcc
atggctctcagcactcgcttcactgaggtggaatgtttggcagagtaccaccaacacctg
tccaaagagtcgctggctgggaacaaacctgccaacgctgtgcttcacaaagtgctgaac
cagctggaggaacttctgagtgacatgaaagcagatgtgacccgactgcccaacatgctg
tccagaatcccaccggtgtcggcccgtctgcagatgtccgagaggagcatcctgagccgc
ctcaccagccgaggcagcgaacctccactgcagcagcctttcagccagggcgggttcggc
tgctcgcagatgtacagcagcaccttcggcgggggattcagaggaccaggcggacagccc
atggtcaactacagtcagatgccccttggaccctacgtcagcgtgtcatcgaatgccccc
ctgacccctacaagccatctggacaagaaagcacttgactctttgagagacgtggctacg
cctgaactcaaatcgggcaaatctagcgacgtcatctgcatcgaggactag
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integrated database retrieval system
