Nematolebias whitei (Rio pearlfish): 119412093
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Entry
119412093 CDS
T08042
Name
(RefSeq) transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119412093
Transcription factors [BR:
nwh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119412093
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
119412093
NCBI-ProteinID:
XP_037534997
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Position
7:complement(2745538..2775193)
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AA seq
419 aa
AA seq
DB search
MAALLLEKQQQQMELARQQQEQIAKQQQQLIQQQHKINHLQQQIQQVNMPYVMIPAFHPN
TQPLPVNSDSPMALPLQPIPCKPTVDYPMHLLSNIHPTPVKRSSGSFRQEASQPLNLTSK
PKGLELGKTSSPQSLELGSLGLQVTYRSRDVQRESHTPPCSAISFLGDGDVVTKAIHDAQ
QLLRSHCMRGRDRERDGGLPVSVPSSLTGTRPTSSSGHIKRPMNAFMVWAKDERRRILQA
FPDMHNSSISKILGSKWKAMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEG
RRLRVGEYKAMMKSRRQEQRATYTHSHTEPPQIHYSQSDGQYSGGGGSAPVPNMSFHPAL
MEHYLPQIPPTPRAESQATPTFQPRDRETERVRTRPPYSEGEESDVGERSEGEMVLLTD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctgctgctggagaagcagcagcagcagatggagctagcccggcagcaacag
gaacagattgctaagcagcagcagcagctgatccagcagcagcataagatcaaccatctt
caacagcagattcagcaggtgaacatgccctatgtgatgatcccagcctttcacccaaac
acccagcccctccctgtcaactctgattccccgatggcactgccgttgcagcccatccct
tgcaagccgacggttgactaccctatgcatctgctgtccaatattcatcccacccctgtc
aagaggagcagtggttccttccggcaggaggccagtcagcccctcaacctgacctccaaa
ccaaagggtctagagctggggaaaacatccagtccacagagcctagagctgggatcgctg
gggctgcaggtgacctacagatccagagatgttcagagggagtctcacaccccgccttgc
tctgccatcagtttcctgggagatggcgacgtggtcaccaaggccattcatgatgcccaa
cagctcctgagaagtcactgcatgagagggagggacagggagagagatggtggcctgcct
gtctctgtcccaagcagcttaactggcactcggcccacctcctcctccggccacataaag
agaccaatgaatgccttcatggtgtgggccaaagatgaacgcaggagaatcctacaagcc
ttccctgacatgcacaactcatctatcagcaagatcctgggttctaagtggaaggctatg
tccaaccaggagaagcagccatactatgaagagcaggcaagactgagcaggcagcatctg
gagcgctacccagactacaaatacaaaccccgacctaaacgtacctgcatagtggaggga
cggaggctgagggtgggcgagtacaaagccatgatgaagagccgaagacaggagcagaga
gctacctacacccacagtcacacagagccaccacagatccattactcccagagcgatggc
cagtactcaggaggcggaggatcagcccctgtcccaaacatgtcttttcaccctgcactg
atggagcattatctaccacaaatcccacccacacccagagccgagagccaggccacgccc
acctttcaacctagggatagagagacggaacgagtgcgaacacggcccccctacagtgaa
ggagaggaaagtgatgtgggagagaggagcgagggggagatggtccttctgacagactga
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