Nematolebias whitei (Rio pearlfish): 119412148
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Entry
119412148 CDS
T08042
Symbol
cdh4
Name
(RefSeq) cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119412148 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119412148 (cdh4)
Cell adhesion molecules [BR:
nwh04515
]
Cadherins
Major cadherins
119412148 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Pox_A30L_A26L
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
119412148
NCBI-ProteinID:
XP_037535052
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All DBs
Position
7:complement(12719575..13165973)
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AA seq
953 aa
AA seq
DB search
MDGGCVLLLCTLLVGASSGSRTGQLQKPPCRPGFSQNFYTVIVSRDVLHGQSILKDTTLS
NERVKFEDCQRCRDVGFVSSDPNFSVRSDGTVYAEQDVANLSEPVQFMVTARGLHDPHIW
ETTVKLALAGHLHPLPLTKITFEEMLSRVWDSQPRVIKFSRKHQRGSSANGLRRQKRDWV
IPPINVPENSRGPFPHMLVRIRSDQDKAVGIRYSITGAGADQPPTGIYNIDPISGNMFVT
QPLDREERASFHLRAHAVDINGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSKP
NSSVMQVTATDSDDSTTANGMVHYRILSQTPHSPIPNMFAINSETGVISTLAAGLDRELG
LKAAKAAVAADVSEEKLINLVAASQAQSHLPRDPPTKTGAHLGVHPPAVKVIGMNEQHTG
SHTSSSSLPSVQFSGEVPENKVNVVVTNLTVVDRDQPHSPNWNAVYRIVSGDPSNHFTIR
TNPITNEGMLTVVKPVDFEMNRAFMLTVVVSNQAHLASGIQSSLQSTAGVTISVQDVNEP
PVFPVNPKMIRFEEGVPAGTTLTVFVAQDPDHFIHQIVRYSKLSDPANWLKINRTNGQIT
TMALLDRESMYVKNNMYEATFLAYDNGSPQASGTGTLQIYLIDVNDNAPVLIPREAQICE
RARPNSRINITASDADTEPNIGPFVFELPSFPASIRRNWTISRLNGDYAQLRLRIPYLEA
GVYEIPVIVSDSGNPPLSNRSLIRIKVCPCDNNGDCSATGAVAAAGLGTGAIIAILICII
ILLSMVLLFVVWMKRREKERQAKPLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQP
ESLDHIISKPSGVRRVDERPVIAESQYPVRPSLPHPGDIGDFINDGLRAADNDPTAPPYD
SLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggacggcggctgcgtcctcctgctgtgcaccttacttgtgggcgcatcctcggggagt
agaacaggccagctgcagaagcctccttgtagacccggcttctcccagaacttttacacg
gtgattgtctccagagacgtgctgcatggacagagcatcctcaaagataccaccctgtcc
aatgagcgtgtgaagttcgaggactgtcagcgctgcagagacgtgggcttcgtcagcagc
gaccccaacttcagcgtgaggtccgatgggacggtgtatgctgagcaagatgtggccaac
ctctcagagcctgtgcagttcatggtgacggcacgagggctgcacgatccccacatctgg
gagaccaccgtgaagctggccctcgccggacatcttcatcctctacccctcacaaagatc
acctttgaagaaatgctgtcgagagtgtgggactcccagcccagagttatcaagttttct
cggaaacatcagagaggctcctccgccaatgggctgaggcgacagaagagagactgggtc
atccctcccatcaatgtgcctgaaaactcccgaggacccttccctcacatgctcgtcagg
atccgctcagatcaggacaaggctgtcggcatccgctacagcataaccggagcgggcgcc
gatcagcccccgactggaatctacaacatagaccccatcagtggcaacatgtttgtcacc
caacccctggacagagaggagagagcatccttccatctccgggctcatgcagtggacata
aatgggaaccaagtggagaaccccatagatctgtacatctatgtgatcgacatgaacgac
aacaggcccgagtttcaaaaccaagtttataacggctccgtggctgaaggctccaaacca
aactcctccgtgatgcaggtgacggctacagactccgacgactccaccacagcgaacggc
atggtgcattaccgcatcctgtcgcagaccccccacagccccattcccaacatgttcgcc
atcaacagcgagaccggagtcatctctacattggctgccggcctggacagagagcttggc
ttgaaagcagccaaagcagcagtagcagctgatgtgagtgaggagaagctcattaatctg
gtcgcagcaagtcaggcgcagtcccacctgccccgtgatcctcccaccaaaactggggca
cacctgggagttcacccacctgctgtcaaggtcatcggcatgaacgagcagcacacgggc
tcgcacacctcttcctcttctctgccttctgtgcagttttccggggaggttccggagaac
aaggtgaacgtggtggtcaccaacctgacagtggtggacagagatcagccccacagcccc
aactggaacgccgtctatcgcatcgtcagcggagacccttctaatcacttcaccatccgc
accaaccccatcactaacgagggcatgctgacagttgttaagccggtggactttgagatg
aatcgagccttcatgctgactgtggtggtgtccaaccaggctcatctggcgagcggcatt
cagtcctcccttcagtccacagcaggagtcaccatctctgttcaggacgtgaacgagccg
cccgtcttccctgtcaacccaaagatgatccgtttcgaggagggcgtaccggcagggacc
actctgacggtgttcgttgcccaggaccctgaccacttcatccaccagattgtcaggtac
tccaagttatcagaccctgcaaactggctgaagatcaacaggaccaatggtcagattacc
accatggccctgctggacagagagtccatgtatgtcaaaaacaacatgtatgaagcgaca
ttcttggcgtacgacaatggttctcctcaagccagcgggacggggacactccagatttac
ttgattgacgtgaacgacaacgctccggtgctgataccccgggaggcccaaatctgcgag
cgagctcgccccaattccaggatcaacatcacagcctcggacgctgacacggagcccaac
atcggacccttcgtcttcgagctgccatcttttcctgccagcatccgtcgcaactggacc
atttctagactgaacggtgactacgctcagctcagactacggataccctacctggaggcg
ggtgtgtatgagatcccagttatagtgtcagactcagggaacccccctctgtcaaaccgc
tctttaatcagaatcaaagtttgtccctgtgacaataatggggactgcagcgccacaggg
gccgtggcggccgccggtctcggcaccggagctatcatcgccatactcatctgcataatt
atactgctcagcatggttctgctgtttgtggtgtggatgaagcgcagggagaaggagcgg
caggcgaagcccctgctgatcgaccccgaggacgacgttagggacaacatcctgaagtat
gatgaggagggaggaggagaggaggaccaggactacgacctgagtcagctgcagcagccg
gagtctctggaccacatcattagtaagccatcaggggtgcgcagggtggatgagaggcct
gtgattgctgagtcgcagtatcctgttagacccagtctgccccacccaggagacatagga
gacttcataaatgatggtctgagagcggccgacaacgaccccactgcccccccttacgac
tccttgctggtgttcgactacgagggcagcggttcaaccgccggctccgtcagctcgctc
aactccagcagctcaggagaccaggactacgactacctcaacgactggggtcctcgcttc
aagaagctggcagatctctacgggggcggagacgatgactga
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