Nematolebias whitei (Rio pearlfish): 119412194
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Entry
119412194 CDS
T08042
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03013
Nucleocytoplasmic transport
nwh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119412194 (ddx19b)
03015 mRNA surveillance pathway
119412194 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119412194 (ddx19b)
Enzymes [BR:
nwh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119412194 (ddx19b)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119412194 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
PP-binding
Motif
Other DBs
NCBI-GeneID:
119412194
NCBI-ProteinID:
XP_037535098
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All DBs
Position
7:complement(5597019..5606950)
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AA seq
488 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESISSLQIKDKPEENGTVPNTAASTSDAAKSEPEAESKPADDD
DKEDKAAQSLLNKLIRNNLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYAMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKYPQCLCVSPT
YELALQTGNVIEQMGKYYPEVKLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCTKFKFI
DSKKIKVFVLDEADVMIATQGHQDQSIRIQRTLPKNCQMLLFSATFEETVWNFAQRIVPD
PNIIKLKREEETLDTIKQYYVLCNSKEEKFQALCNIYGAITIAQAMIFCHTRRTAGWLAG
ELSRENHQVALLSGEMQVEQRAAVIERFKDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFNKKIERLDTDDL
DDIEKIAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacagactcctgggcgcaggccgtggacgagcaggaagccgcggctgagtcgatc
agtagccttcaaataaaagacaagccagaagagaatggcacggttcccaacactgctgcc
tccaccagcgacgctgcaaaatcagaacctgaagcagaaagcaaacctgcagatgacgac
gacaaagaggataaagcagcacagtcgctgctgaacaagctgattcgaaataatcttgtt
aacacaacaaatcaagtggaagttcttcagaaggatcccaactctccactttactctgtg
aagtcctttgaagaattacggctcaaaccacagttgttacagggagtgtatgccatggga
ttcaatcggccatccaaaatccaggaaactgcattacccatgatgctggctgagcctcca
cagaatctgatcgcccagtctcagtcgggaactggaaaaacagctgcctttgtcctggcc
atgcttagccatgtcgaccccaacaacaaatatccccagtgcctgtgtgtgtcaccaact
tatgaactggcacttcagactggtaacgtcatcgagcagatgggcaaatattaccctgaa
gtcaaactagtctacgccattagagggaataaattgcagcgaggcatgaagcttcaggag
cagatagtcattgggacacctgggaccatgctggactggtgcactaaattcaaatttata
gactccaagaagatcaaagtgtttgtgctggatgaagccgatgtcatgatcgccacacag
ggtcaccaggaccagagtatccgcatccagaggacgctgcctaaaaactgccagatgttg
ctcttctcggccacgttcgaggagaccgtttggaacttcgctcagcgcatcgtgccagat
cccaacatcatcaagctgaagagggaggaggagacgctggacaccatcaagcagtactat
gtgttgtgcaacagcaaggaggagaagttccaggctctctgtaacatctacggagccatc
acaatcgctcaagccatgattttctgccacacgagaagaactgcaggttggcttgcagga
gagctgtccagagaaaaccaccaggtggcgctgctgagcggagaaatgcaggtggagcag
agggctgcagtcattgaacgcttcaaagatggaaaagagaaagtgctggtgacgactaac
gtttgtgctcgaggcatcgatgtggagcaggtttctgtggtgatcaactttgacctgccc
gttgacaaagatggcaacccagacaacgagacgtacctgcaccggattggacgcacaggt
cgatttgggaaaaggggactggccatcaacatggtggatagcaagatgagcatgaacatc
ctcaacagaatccaggaacatttcaacaagaagattgaaagattagacacggatgatctg
gatgatattgagaagattgccagctaa
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