Nematolebias whitei (Rio pearlfish): 119412230
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Entry
119412230 CDS
T08042
Symbol
msx1a
Name
(RefSeq) homeobox protein MSX-1a
KO
K09341
homeobox protein MSX
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119412230 (msx1a)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
119412230 (msx1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
119412230
NCBI-ProteinID:
XP_037535140
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Position
7:7852066..7853250
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AA seq
281 aa
AA seq
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MAPSSPAMSALSAAVKSEELPPQPRSALASRDMQSSLSPAEDAGKPKVSILPFSVEALMA
DRKPSREAPSPDGAAGTSHDALGKCARMGSFAVLDTSLPVSSAFSVGDIMNLSEDVLVKP
ESPDGKERTPWIQSARFSPTPPRRLSPPACPLRKHKTNRKPRTPFTTSQLLALERKFRQK
QYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAFGISF
PLGAHVPASYAGSHPFQRHSLPVSPVGLYAAHVGYSMYHLA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcatcgcctgccatgtcagctttgagcgccgctgtgaaatctgaagagctg
cccccgcagccccgctcggctctggccagcagggacatgcagagcagcctgagccccgcg
gaggacgccgggaagcccaaagtctccatcctgcccttcagcgtcgaggctctgatggcg
gacaggaagcccagcagagaggctccatctccggacggcgcggccgggacgtcccatgac
gcgctggggaagtgcgcgcggatgggttccttcgcggttctggatacttctctgcccgtg
agctccgcgttctcagtgggagacatcatgaacttgtccgaggatgtgctggttaaaccc
gagagcccggacggcaaagagaggacgccgtggatccagagtgcacgtttttctcccact
cctccaagacgcctgagtcctcctgcctgtcctctgcgcaagcacaagacgaacagaaag
ccccggacccccttcaccacgtcccagctgctcgccttggagaggaagttccgccagaag
cagtacctctccatcgccgagcgcgcggagttctccagctccctgaacctgacggagacc
caggtcaagatctggttccagaaccggagggccaaagccaagcgtctgcaggaggcagag
ctggaaaaactgaaaatggcagccaagccgatgctgcccccggccttcgggatttccttc
cctctcggtgcgcacgtccccgcgtcctacgcgggctcgcacccgttccagaggcactca
ctgccggtgtctcccgtgggactgtacgcggcgcacgtgggatacagtatgtaccacctg
gcttga
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