Nematolebias whitei (Rio pearlfish): 119412278
Help
Entry
119412278 CDS
T08042
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119412278 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119412278 (rae1)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119412278 (rae1)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119412278 (rae1)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119412278 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_EIPR1
NBCH_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_SPT8
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
119412278
NCBI-ProteinID:
XP_037535193
LinkDB
All DBs
Position
7:complement(12579583..12590574)
Genome browser
AA seq
369 aa
AA seq
DB search
MSLFGTNTSFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIAG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKAIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPTKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttggaacgaacaccagttttggaacaggagggactggagtctttgggagc
acaactacagacagccataaccccatgaaggacgtggaagtgacgtcaccaccagatgac
agcattagctgtttggccttcagtcccccaaccatgccgggaaacttcctcattgcaggg
tcttgggctaatgatgtccgatgttgggaggtgcaggacaatggacagactgtccccaaa
gcccaacagatgcacacaggtccagtactggacgtttgctggagtgatgatgggagtaaa
gtcttcactgcatcttgtgacaagacagccaagatgtgggatctgaacagcaaccaagca
atgcagattgcacagcacgacggtccaattaaagcgatccactggataaaagcccccaac
tacagctgtgtcatgacaggcagctgggataaaacgcttaagttttgggacacccgctcc
cccaatcctatgatgtccctgcagatgcctgagagatgctactgtgcagacgttgtgtac
cccatggcggtggtagccacagctgaaagaggccttatagtgtatcaactagagaaccag
ccctctgagtttcgccgaatagactcccctctcaaacatcagcaccgttgtgtcgccata
ttcaaggacaagcagaacaagccgacaggttttgcacttggaagcattgagggccgagtg
gcgattcattacatcaaccctccaaacccaaccaaagataacttcaccttcaagtgccac
aggtccaatggaaccaacacaaccactccacaggacatttatgctgtgaacgccatctcc
ttccatcctgtccatggcactctggccactgtgggctcagacgggcgcttcagcttctgg
gacaaagatgcccgcaccaagttgaagacctcagagcagctcgaccagcccatcacagct
tgctgcttcaacaacaacggcaacatcttcgcctacgcttccagttacgactggtcaaag
ggccatgagtactacaacccccagaagaagaactacatctttctgaggaacgctgcagag
gagctgaagcctcgaaacaagaaatggtga
DBGET
integrated database retrieval system
