Nematolebias whitei (Rio pearlfish): 119412287
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Entry
119412287 CDS
T08042
Symbol
trpc4apa
Name
(RefSeq) transient receptor potential cation channel, subfamily C, member 4 associated protein a isoform X1
KO
K11796
Trpc4-associated protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nwh01009
]
119412287 (trpc4apa)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119412287 (trpc4apa)
Protein phosphatases and associated proteins [BR:
nwh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119412287 (trpc4apa)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119412287 (trpc4apa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
Translin
Motif
Other DBs
NCBI-GeneID:
119412287
NCBI-ProteinID:
XP_037535203
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All DBs
Position
7:14176507..14194090
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AA seq
775 aa
AA seq
DB search
MATLVGSEFTCTGRKRRNSNNSIVTKFTSSKITGKGFSRGTQLPGGLLQERDKRAKWHGI
PVLLQKLYESSHPNSDLSHAHSFLKVLSSQLSMEAMSFVTEDRKTAQESTFPNTYTFDLF
GGVELLVEILMRPTLTMQKKIPKTVNDDLVKDCLSVLYNCCICTEGVTKSLAARDDFVLF
LFTLMTNKKTFLQTATLIEDILGVKKEMIQLDGIPNLSGLVQSFDQQQLANFCRILSVTI
SEPDIGNDDKHTLLAKNVQQKCNTSPSRAEVNQVTLLNIPGFIERLCKLATRKVSEATGA
NFLQELEDWYTWLDNALVLDALMQMATEEGEQSNTESSDESSLATSPLRYRLPQSMKIVH
EIMYKVEVLYVLCVLLMGRQRNQVHKMLAEFRLIPGLNNLFDKLIWRKYTASNHVVHGQN
ENCDCSPEISFKIQFLRLLQSFSDHHENKYLLLNNQELNELSAISMKANIPEVEALVNTD
RSLVCDGKKGLLTRLLTVMKREPPDSSFRFWQARAVESFLRGATSYADQMFLLKRGLLEH
ILFCIIDSGCTSRDVLQSYFDLLGELMKFNIDAFKRFNKYVNTPEKFQAFLTQINSSLVD
SNMLVRCIVLSLDRFESQTEDVKVMEVLSECCLLSYVARVENRLSFLFRLINIINVQTLT
QENVSCLNTSLVILMLARRKAKLPFYLNALREKEYADKYPGCLLNNFHYLLRFWQRHYLN
KDKDSTCLENSSCIPFSYWKETVSVLLDSDRTSRCAIVSYIDEPFVDLDRDLLED
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcttgtgggttccgagtttacttgtactggaagaaaacgaagaaactccaac
aacagcatagtcacaaagttcacgtccagtaaaatcactggcaagggtttcagtcgagga
actcagctcccaggaggcctgctccaggagagagataaacgtgccaagtggcatggcatc
cctgttttgcttcagaagctctacgagagcagccatcccaacagtgacctctcccacgct
cacagttttctcaaggtattatcatcacagctctccatggaggccatgtcctttgtcaca
gaagaccggaagactgctcaggaatccaccttccccaacacgtatacctttgaccttttt
ggtggagtcgaactgcttgtggaaatcttgatgagacccacactaactatgcagaagaaa
atacctaaaacagtgaatgatgacttggtcaaagactgccttagtgttctgtacaattgt
tgtatatgtactgaaggggtgacaaagagcctggcagcgagggacgattttgttttgttt
ctcttcaccctgatgacaaacaagaagacgttcctgcagactgcaactcttattgaagac
attctaggagtgaaaaaggagatgatccagctagacgggatccccaacttgtccggcctg
gtccaaagctttgaccagcaacagctggccaacttttgtcgcatcctgtctgtcaccatt
tcagaacctgacatcgggaatgatgacaaacacactttattggccaaaaatgtacagcag
aagtgcaacaccagtccttcacgggctgaggtcaaccaggtcactcttctgaacatccct
ggcttcatcgagcggctgtgtaaactcgctaccagaaaggtttctgaagccacaggagca
aatttcctgcaggagctggaagactggtacacgtggctggacaacgctctggttcttgat
gctctcatgcagatggccaccgaggagggtgagcaaagcaacacagagtcatcagatgag
agttctctggccaccagccccctgagatatagactgcctcagtccatgaagattgtccat
gagatcatgtataaagtggaagtgctctacgtgctctgtgttcttctaatgggccgacag
aggaatcaggtccacaagatgctggctgagttccgcctcatcccgggtctcaacaatctg
tttgacaagctcatctggaggaagtacacagcctccaatcatgtggtgcacggccagaat
gaaaactgcgactgtagtcctgaaatatcctttaaaatccagtttttgcgactacttcag
agcttcagtgatcaccatgagaacaagtatctgctccttaataatcaggagctgaatgag
ctgagtgccatatccatgaaggccaacatccctgaggtggaagctctggtcaacacggac
agaagcttagtttgtgacggtaagaagggtctcctcacgcgcctcctcactgtcatgaag
agggagcctcccgactcgtctttcaggttctggcaggcgagggcagtggaaagttttctg
agaggagcaacatcttacgcagatcaaatgtttcttctaaagagaggtctattagagcac
atcctgttctgcatcatagacagcgggtgcacgtctcgagatgtccttcagagctacttt
gatcttctcggagagctcatgaagttcaacattgatgccttcaaaagattcaacaaatat
gtcaacactccagagaagtttcaggctttcctgacccagattaacagctcattagtggac
tcaaacatgctggtgcgctgcattgtcctttctttggaccgctttgagagccaaactgaa
gatgtcaaagtgatggaggttctgtctgagtgctgcttgttgtcctacgtggctagagtt
gagaacaggctgtctttcctcttccgtctcatcaacatcatcaatgttcaaactctcacg
caggagaacgtcagctgtttaaacaccagtctggtgatcctgatgctggccaggagaaag
gctaagctgcccttctatctgaacgccctgcgggagaaggagtacgccgacaagtaccca
ggctgcctgctcaacaactttcattacctgctgcgcttctggcagcgccactacctcaac
aaggacaaagacagcacctgtctggagaacagctcctgcatcccgttcagctactggaag
gagacggtgtctgtgctgctggactcagacaggacttctcggtgtgccatagtgagttac
attgacgagccctttgtggatctggacagagacctgctggaggattga
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