Nematolebias whitei (Rio pearlfish): 119412352
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Entry
119412352 CDS
T08042
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nwh01009
]
119412352 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119412352 (stau1)
Protein phosphatases and associated proteins [BR:
nwh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119412352 (stau1)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119412352 (stau1)
mRNA cycle factors
Stress granule specific factors
119412352 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
119412352
NCBI-ProteinID:
XP_037535271
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All DBs
Position
7:29125234..29137472
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AA seq
695 aa
AA seq
DB search
MSQLQFPCPASPMPAASAPMQLGQPQPSYSIPCATGALASESASQPVRTSALPAGSATPY
NTTTVSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKIFSVRLTLGDQHWEA
EGTSIKKAQHSAAASALAETTLPKPTMRTPRNTGRNPADGITHTMELNALCVKLGKKANF
KPIDPYPGMRPPNFNYNVRAPGPYQRSMQQYYYPFPPMGPMIYQMELSIGGQQFIGKGRT
RQMAKHEAASKALKVLQKEPMLQQCPVMNGEPEEENLNKSEISQVFEISLKQNLPVNFEV
LKEDGPPHMKSFVVRVSVGEFMGEGEGKSKKIAKKLAAAAVLNELKRLPQVPSVEKKLPR
IKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYAMVTERGLPRRREFVMQVT
VCGQSAEGMGPSKKVAKRNAAEKMLELLGYKVPQPQLPKPALKTDEKTPVKKPSDGRKVT
FFEPGSVEGVALGSKEEDFRLPYLSTQQLPAGILPMVPEVAQAVRACQGSQARDYSRALP
NPGKATITAMIANELLYAGTSMTAETILKNKNNLNQLPHGPLTRPTEQLGYLASVQNLQV
DYTDFPKNNKNEFVSLINCSCQPPLISHGIGKDVESCHDMAALNILKLLSELYLQSNERT
GNGPTSGCGKQELEGDLHLKQTNSSTLAQTLDGKA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagctccagtttccatgtcctgctagtcccatgcctgctgcctctgccccgatg
caactgggtcagccgcagcccagctacagcattccttgtgcaacaggcgccttagcatcg
gagagtgccagtcagcctgtcaggacctctgctctcccagcaggctctgccactccttat
aataccaccacagtatctaacatggcaaaccctaaagagaagacccccatgtgtttggtg
aatgagttggcccgttttaacaagatccaaccggagtacaagctgctttctgagcaagga
ccagctcattccaagattttttcagtgaggctcacactgggagatcagcactgggaggca
gaggggaccagcatcaagaaagctcagcattccgctgctgcatctgctctcgctgagacg
acacttcccaagcccaccatgaggacacctcgcaacacaggcaggaacccagcagatggc
attacacataccatggagttgaatgctctttgtgtgaagctcggtaaaaaagctaatttt
aaacctattgacccatacccagggatgagaccgccaaactttaactataatgtccgtgct
cctgggccttaccagcgctctatgcaacagtactactatccatttcctccaatgggacca
atgatctaccagatggagctttccatcggaggccagcagttcattgggaaggggcgtacg
aggcagatggccaaacacgaagctgcttctaaggctctgaaagtgctgcagaaggagccc
atgctgcagcagtgtccagtgatgaacggtgaaccggaggaggagaacttgaacaaatca
gaaatcagtcaagtttttgaaatttccctcaaacagaacttacccgtcaactttgaggtt
ttaaaagaagatggccctccacacatgaaaagttttgtagtgcgtgtttcagttggggag
ttcatgggagaaggtgaggggaaaagcaaaaagattgccaagaagctggcagcagcggca
gtgctgaacgagttgaagcggctaccccaagtgccgagcgtggaaaagaagctgccacgc
atcaaaaagaaaaccaaatccatcatcaagctgcagaccagccctgagtacggccaggga
atgaatcccatcagccgcttggctcagatccaacaggcgaagaaggagaaggagcctgag
tacgccatggttacagagcgaggtctgccacgacgcagggagtttgtcatgcaggtgacc
gtgtgcggccagtccgcagagggaatgggaccgagtaagaaggtggcaaagaggaacgca
gcagagaaaatgctggaactcttgggatataaagtgcctcagcctcagcttcccaaacca
gctcttaaaacggatgaaaaaaccccagtaaaaaagccaagtgatgggcgcaaagtgacc
ttctttgaaccgggttctgtagagggggtggccttgggttctaaagaagaggacttccgc
ctgccttacctcagcacccagcagctgccggcaggtattctgcccatggtgcctgaggtg
gcccaagcagtcagagcctgccagggatctcaggccagggactatagccgagctttgccc
aatccaggcaaggccaccatcactgccatgattgccaacgagctgctttatgctgggaca
tccatgacagctgagactatcctgaagaataaaaataatttgaaccagctgcctcacggc
cctctcaccaggccgactgagcagctcggctaccttgcatctgtgcagaatttgcaggtg
gattacacagactttcccaaaaacaataagaatgagtttgtgtctcttattaactgctcc
tgccagcctccactcatcagtcatgggattggaaaagacgtagagtcctgtcatgatatg
gctgctctgaatatattgaagttgctctctgaattgtacctgcaatcaaatgaaaggaca
ggaaacggaccaacgtcaggatgcggcaagcaggaactggaaggcgacttgcacctcaaa
cagactaactcaagcacattggcacagacacttgatggcaaagcttag
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