Nematolebias whitei (Rio pearlfish): 119412359
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Entry
119412359 CDS
T08042
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nwh03009
]
119412359 (rrp9)
Ribosome biogenesis [BR:
nwh03009
]
Eukaryotic type
90S particles
Other 90S particles
119412359 (rrp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
GTP1_OBG
WD40_like
Motif
Other DBs
NCBI-GeneID:
119412359
NCBI-ProteinID:
XP_037535278
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Position
7:29435702..29442207
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AA seq
486 aa
AA seq
DB search
MSSSFFIKTKSNPKLAKKGKDTAASKRKGDGGSGGNIKLIAKKNIHKFNEEISSDSETES
PAVTKRRRQAKEEIKYEETPQEKKLRLAKLYLEQLKEEEENKAEDDAFETDLIAGRLQEE
VLEQKGKLQRIIAKDLIPPDASEIRVFKGHKLPLTCLVISPDDKCIFSAAKDCSVIKWDI
ESGRKLHTIHGGRKGTEECHVGHTAHILCMTISSDGKYLATGDMNKLIMIWEAETCKHLY
KFTGHKGPVSGLSFRKGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDSITGLDSLSRE
RCVTAGGRDGTVRVWKIAEESQLVFHGHGGSIDCVQLINEEHMITGADDGSLCLWSVNKK
KPLCTVKQAHGCHGDSGLEQPHWVASVAALQNSDTVASGALGCSHNSQVNVWKCGQSYRG
LELLFSVPVNGFINSLKFSSSGQFLVVGVGQEHRLGRWWRLKEAKNGIYIIPLKRKPQGA
EGNQVD
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcattctttattaagacgaaatcaaaccctaaattagccaaaaaaggaaaa
gatacagcggcgtcaaaacgaaagggtgatggtggttcaggtggaaatatcaaattaatc
gcgaaaaaaaacatccacaaattcaacgaagagatttccagtgactctgagacagaaagt
cctgcagtgaccaagaggagaaggcaggccaaagaggagattaagtatgaggaaactccc
caggagaagaagctcagattagctaaactttacctggaacagctgaaggaagaggaggaa
aataaagctgaagatgatgcctttgagaccgatttgatcgcaggaagactccaagaagaa
gtgcttgagcagaaaggaaaactccaacgtattattgccaaagatctcatcccacccgat
gcttcagagatcagagtattcaagggacacaaacttccacttacctgtcttgtcatctca
cctgatgacaaatgcatcttctctgctgccaaagactgctcagtcattaaatgggacatt
gaaagtggcaggaagctgcacacgatacatggaggaaggaaaggaacagaagagtgccat
gttggacacacagctcacatcctgtgcatgaccatatcctcagatggaaaatatttggcc
actggagacatgaacaaactgatcatgatctgggaggcagaaacttgtaaacatctgtat
aaatttacaggacacaaaggccccgtgtcgggtctttccttcaggaaggggactcatgat
ctgtacagtgcttctcatgaccgttcaatcaaggtgtggaatgtagacgagaacgcatac
gtggaaaccctctttggccatcaggattcgatcacaggtctagacagtctgagccgtgaa
cgctgcgtgactgcaggggggcgggacggcactgtgagggtgtggaagatagccgaggag
tcccagctggtgtttcatggacatggtggttcaattgactgtgtccagctcataaatgaa
gagcacatgataacaggagcggatgatggctctctgtgtctttggagtgtcaacaagaag
aagcctctctgcacggtgaagcaggctcacggttgccatggcgactcggggctggagcag
cctcattgggtggcctcagtcgcagcccttcagaactccgataccgtcgcctcaggtgct
ttgggctgttctcataactctcaggtgaatgtgtggaaatgtggtcagagctatcgtgga
ttggagcttctcttctctgtaccagtgaacggttttatcaacagcctgaagttttccagc
tctggtcagttcttggtagttggagtcggacaggagcacagattggggcgatggtggaga
ttaaaagaagccaaaaatggcatctatatcattcctctgaaaagaaaacctcagggtgca
gaaggaaatcaagttgactga
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