Nematolebias whitei (Rio pearlfish): 119412409
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Entry
119412409 CDS
T08042
Symbol
itga7
Name
(RefSeq) integrin alpha-7
KO
K06583
integrin alpha 7
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04510
Focal adhesion
nwh04512
ECM-receptor interaction
nwh04810
Regulation of actin cytoskeleton
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119412409 (itga7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119412409 (itga7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119412409 (itga7)
04810 Regulation of actin cytoskeleton
119412409 (itga7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nwh04147
]
119412409 (itga7)
04515 Cell adhesion molecules [BR:
nwh04515
]
119412409 (itga7)
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119412409 (itga7)
Cell adhesion molecules [BR:
nwh04515
]
Integrins
Integrin alpha subunits
119412409 (itga7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
LYRIC
Motif
Other DBs
NCBI-GeneID:
119412409
NCBI-ProteinID:
XP_037535337
LinkDB
All DBs
Position
7:33389450..33435131
Genome browser
AA seq
1126 aa
AA seq
DB search
MAALMGHGNTFPLSSPSSHLWTFFFGAVFTLFSQVLCFNLDTTHTLHKLGDRGTFFGFSV
ALHQQLNPESQSWILVGAPQAAGQGLLRGSRPGALFRCPITPEEYDCERVDIDEDINLDR
ESKDNQWLGVTVKSQGIGGKVVTCAHLYELRQRVSQSSETRDPIGRCYVLSDDLSKRDDL
DGGEWKFCEGRPQGHEQFGFCQQGLSVSFTPDNNFILFGAPGTYNWKGEMQVQLLNQTLL
ELGFYDDGPYEVADHKEHNARLIPVPNHSYLGFSVDSAMGIMSLGELTFVAGAPRANHTG
AVVLLRKDNVHRLVPQHIFWGEELASSFGYSVVTADLNNDGWTDLIVGAPNFFDRKAEIG
GAVYVYLNPFGHWDDQARPIRLNGTYDSMFGMTVSNVGDLDQDGYGDIAVGAPFDEDGKV
FIYRGSDAGIETKPAQVLDGHDFDVRRFGYSISGGLDIDENHYPDVAVGSLNDSVVLFRS
RPVIHVIRDISIDPQYIDLQHLNCKERDGVCVEVKACFTFTAYPEHYSPHMTLVVNFEAD
TERRKLGLPHRVNFLGRSSLEPEYTQTEEVELHRQRHPVCTTAIFQLHDNIRDKLRPISL
AITHTIKPVPPRRHSGKRPQRLPPVLNLTPSNTLHSEVNFLREGCGSDKICQSNLKLSYQ
FGTRPLNSDLFIALPRDEDGLQVFSLSDQKLVVLEITVTNMPSDPLQPEEDGDDAHAAQL
LISLPNMLSYSGSRVPSQMRCQANQNGSQVECDLGNPVKRNTKLQFTINLSTANITTETT
ELTADLQLSTISEQPDLDPITALAKVVIELPLSVSGLARPHQLFFSGTVKGESAMTSLED
IGSPVELEFVVSNPGKALQTLGSAFLNIMWPNELANGKWLLYPGSMKFADHPETQCTPKE
ALNPLKLKSTSHANNSQAAGQKQLGRSRRSYPEEEDQVMTKGSAGRTTPAVAASERRKSL
KLDCLLGSARCILFQCPLHSFTGQAVLNIHARLWKSSFIEDFPAVSALELLVRANITVRS
SIKHLVLRDAMTQIPVMIYPELGLADQYWIPWWIILIAILAGILLLTLLVCILWKCGFFR
RSHYKDKLPQYHAVKIPREHRPQFQTEKSGSVHKKEWATHWSDGTL
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttgatgggacatggaaacacatttcccctctcatctccctcctctcatctt
tggactttcttctttggggctgtgttcactctcttcagtcaagtcttgtgcttcaacctg
gacacgactcacacactccacaagttaggagaccggggcaccttttttggtttctctgtg
gcacttcaccagcagctcaacccagagtctcagagctggatccttgtgggggcaccgcag
gcagccggacagggcctgctgaggggaagtcgaccaggagctctgttcagatgtccaatc
acaccggaggagtacgactgtgagagggttgacatcgatgaagacataaatcttgacaga
gagagtaaagacaaccagtggctcggagttaccgtcaaaagtcaggggattggaggcaag
gtggtgacctgtgctcacctgtacgagctgaggcagcgtgtgagtcaatcttctgagact
cgagatcccatcggacgctgctacgtcctcagtgatgacctgtcgaagcgagacgacctg
gatggaggagaatggaagttctgcgagggtcggccgcagggacacgagcagtttgggttc
tgtcagcagggcctgtctgtcagtttcactccggacaataacttcattctgtttggggct
ccaggaacgtacaactggaaaggtgagatgcaagtccagctcctgaaccagactctgttg
gagcttggtttctatgacgacggcccgtacgaggtggcagatcacaaagagcataatgcc
aggctcatccctgtgcctaaccacagttacctgggattttctgtagactcggctatggga
ataatgagcctcggggagctgacctttgtggccggtgcacctcgagccaatcacacagga
gctgtggtgctgctgaggaaggacaacgtgcaccgactggtgccgcagcacatcttctgg
ggggaggagctggcatcctcttttgggtattcagtggtgacggcagatctcaacaacgac
ggttggacagatttgattgttggagctccaaacttttttgaccgtaaagcagagatcggt
ggagctgtgtacgtctatctaaaccctttcggtcactgggacgatcaggctcgaccgatc
cgcctcaatgggacgtacgactccatgtttgggatgacagtcagcaacgttggagacctc
gatcaggatggatatggagatattgctgtgggagctccgtttgatgaagatggaaaagtt
ttcatctacagaggctccgatgctggaattgagactaaacctgctcaggttctggatggc
catgacttcgatgtgaggcgttttggatattccatctcaggggggttggatatagatgaa
aaccactatccagatgtagcagtcggttctcttaacgattcagtggttctcttcaggtct
cgcccagtcatccatgtgatcagagacatatcaattgaccctcaatacattgatctgcag
catttaaactgcaaggaaagagatggagtctgtgttgaagttaaggcctgcttcaccttc
acagcctacccagaacactattcaccacatatgacccttgtggtgaactttgaagccgac
accgaacgcaggaagctgggcctcccgcaccgtgttaacttcctgggtcgtagttcactg
gagcctgagtacacacagaccgaagaagtggagcttcatcggcagcgtcaccctgtgtgc
accaccgccatcttccagctgcacgacaacattcgtgacaaactgcggcccatatcgtta
gcgatcacccacactatcaaacctgtgccacctcgcagacactctggcaaaagaccgcaa
aggctacctcctgtactcaatctcaccccatcaaacaccctgcactctgaggtgaacttc
ctgagagaaggatgtggcagcgacaaaatctgtcagagcaatctgaagctgagctaccag
tttgggacacgacctctgaactctgacctcttcatcgctctgccaagagatgaggacggc
ttgcaggtattttccttgtcggaccagaaactggtggtgctggagatcaccgtcaccaac
atgccctctgaccctctccagcctgaggaggacggtgatgatgctcatgctgctcagctg
ctcatcagtctcccaaatatgctgtcatattccggctctagggtcccatcacagatgaga
tgtcaagcaaaccagaacggctcccaagttgaatgtgatctgggaaaccctgtcaaaaga
aatacaaagctacaattcaccatcaacctgagcacagcaaacattaccacagagacgacc
gagttaactgcagatctgcagctctccactattagtgagcagcctgacctggaccccatc
acagctttggctaaagttgtgatagagctccctctgtctgtcagtggactggctcgtcct
caccagctgttcttcagcgggacagtgaagggggagagcgccatgaccagtctggaggac
atcggcagccctgtggagttagagtttgtggtttcaaatcctggcaaagctctccagacg
cttggctctgccttcctcaacatcatgtggcccaatgagctggctaacggaaagtggctc
ctctatcctggaagcatgaagtttgccgaccacccagagactcagtgcactccaaaagaa
gccttgaatcctctgaagctaaagagcacctcacatgcaaacaattcacaagctgctggt
cagaagcagttgggcagaagtcgtcgttcctatccagaggaagaagatcaggtgatgaca
aaaggcagcgcggggcgaaccactccagctgtggcagcttcagagagacgcaagtcgctc
aaactggattgtctcctggggtcggcacgctgcattctgttccagtgtcctctccatagc
ttcactggtcaggctgtcctcaacatacatgccaggctgtggaaaagcagcttcatcgag
gatttcccagcagtcagtgctctggagctgctggtcagagccaacatcactgtcaggtcc
agcatcaaacacctggtcctcagggatgcaatgacacagattccagtgatgatctaccca
gagttgggtcttgctgatcagtactggatcccctggtggatcatcttaatagccatcttg
gcaggcatcctgctgctgactctccttgtatgcatactgtggaagtgcggcttctttcga
cgcagccactacaaagacaaacttcctcagtaccacgcggtgaagattcctcgtgagcat
cggccccaattccagaccgagaagtctggaagtgtccacaaaaaggaatgggccacgcac
tggagtgacgggaccttgtaa
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