Nematolebias whitei (Rio pearlfish): 119412421
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Entry
119412421 CDS
T08042
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00450
Selenocompound metabolism
nwh00970
Aminoacyl-tRNA biosynthesis
nwh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
119412421 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119412421 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nwh01007
]
119412421 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwh03016
]
119412421 (mars1)
Enzymes [BR:
nwh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
119412421 (mars1)
Amino acid related enzymes [BR:
nwh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
119412421 (mars1)
Transfer RNA biogenesis [BR:
nwh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
119412421 (mars1)
Prokaryotic type
Other AARSs
119412421 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_C_2
GST_N_3
GST_C
GST_N_2
GST_N
HTH_23
GST_C_6
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
119412421
NCBI-ProteinID:
XP_037535350
LinkDB
All DBs
Position
7:complement(34040407..34059683)
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AA seq
917 aa
AA seq
DB search
MKLFVSEGNPHCLKVLAALEVTGAQCEVLYVNHEEKVVPFLSRPSLPALLLPSGQHLFSS
NAICRYFFEANGQECNNLCNQWLEWETTVLQPALLQTLHMAVLQGKGSEVSSVLQSPLNF
LDQSLSKGNMLYFTGEAVSVADVVLWGALHPVLSDSSLALSEHTSVRAWFDRVAALHSCQ
SAAQTVLQGKGLQAMKSYMQKQPAPQSSQCRDTQPCNSSPAECEEGERDVSEEEMEAAVL
TWRKSLNTSLTTNTHPILPQEGKRNVLVTSALPYVNNVPHLGNIIGCVLSADVFSRYGRL
RGWNMLFVCGTDEYGTATENKAREEGLTPQQICDKYHTVHSSIYKWFQIDFDFFGRTTTE
KQTEIAQNIFWRLHKNQFLVEETVEQLRCETCQRFLADRFVEGMCPHCSYPEARGDQCDK
CGRLINAVELREPQCKVCRQTPVIRSSKHLFLNLPKLESQLEQWLEKSTSSGDWTANAKQ
ITRSWIRDGLKPRCITRDLQWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTNEWEKWW
KNPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLIATEYLNYEDTKFSKSRGV
GVFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNLGNFINRAGVF
VTKFFEGCVPVMDLQREDKKLLALVGWELQQYIQLMDKVRIRDALKHILNISRHGNQYIQ
VNEPWKKIKGGELERQRAGTVTGVSVNISCLLSVMLFPYMPAVSQTIRDQLNAPQSCINT
MLKGTGTFVCALSAGHRIGTVSPLFQKLEADQIEALKKRFGGQQKTLQNNASAQPAAAAA
PAVDVNATTVAGVDPEKAKQLTQAVAEQGDKVRALKVQKAEKDVVAAEVSKLLDLKKQLA
LAEGKSPEPAPQKGKKK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtttgtaagtgaaggcaacccgcattgcctgaaagtgttagctgcgctggaa
gtgacaggagctcagtgcgaagttctgtacgtcaaccacgaagagaaagtggtgcctttc
cttagccgtccatccttgccagctctgctcctgcccagtgggcagcatcttttcagctct
aatgccatttgcagatacttctttgaagcaaatggacaagaatgcaacaatctctgtaat
cagtggcttgaatgggagaccacagttcttcagcctgcgttgttacaaacgcttcacatg
gcagtgctgcagggaaaaggttcagaggtgtccagtgttcttcaaagtcccttaaacttt
ttggaccaaagtttgagcaaggggaacatgttgtattttactggggaagctgtttctgtt
gctgacgttgttttgtggggggcactacaccctgttttatctgactcctctttagccttg
agtgagcacacgtcggttagggcttggtttgaccgtgtggctgccttgcacagttgtcag
tctgctgctcaaacggtgcttcagggaaaaggcctgcaggccatgaagagctacatgcag
aagcaacctgcgcctcagagcagccagtgcagagacacacagccatgcaacagcagccct
gctgagtgtgaggagggtgagcgggatgtttctgaggaggagatggaagcagctgttctc
acctggaggaaaagtctgaacacctcactgacaacaaacacacaccccattttgccccag
gagggcaagcgaaacgtccttgtgaccagcgctttgccatatgtcaacaatgttcctcac
cttggaaacatcattggctgcgttctcagtgctgatgtcttctccaggtatggccgtctg
cgaggctggaacatgctgtttgtgtgtggcacagatgagtacggcacagctacagagaac
aaagccagagaagagggcctgacacctcaacagatctgcgacaagtaccacacagttcac
tccagcatctacaaatggttccagattgactttgactttttcggcagaaccaccacagag
aagcagaccgaaatagctcagaacattttttggcgactccacaagaaccagttccttgta
gaagagacagtggagcagctacggtgtgagacatgtcagcgtttcctggctgaccgcttt
gtagaaggcatgtgtccccactgcagctatcccgaagctcgcggtgatcagtgtgataag
tgtgggcgcctcattaacgcagtggagctcagggaacctcagtgtaaagtctgtagacaa
actccggtaatccgttcctccaaacatcttttcctgaacctccctaagcttgaatctcag
ttggagcagtggctagagaaatcaaccagttcaggagattggacggcgaacgccaaacag
atcactcgctcctggattagagatggactcaaacctcgctgcatcaccagggatctgcag
tggggaacaccagtacctcaccctgacttcaaagagaaggtgttctatgtgtggtttgat
gcccccattggttacctgtccattactgccaactacaccaatgaatgggaaaagtggtgg
aagaatcctcatcaggtggagctgtataacttcatggccaaagacaacgtgccgttccac
agcgtggtatttccctgctctctactgggagctcaggacaactacacactggtcaaccac
ctaatcgccacagaatatctgaattatgaggacacaaagttctccaagagtcgtggtgtg
ggtgtgtttggtgacatggcgaaggacacgggcatcccatcggacgtgtggcggttctat
ctgctgtacgtgcgtcctgaagggcaagattcagctttctcttgggctgacatggctctg
aagaacaactctgagctgctcaacaacctgggaaatttcatcaacagagctggcgtgttt
gttaccaagttctttgagggatgtgtgcctgtgatggatctgcagcgggaagataaaaag
cttttggctctggtgggttgggagctgcagcagtacatccagcttatggacaaagtcagg
atccgcgatgccctgaaacacatcctgaacatttcccgtcatggcaaccagtacattcag
gttaatgaaccctggaagaagatcaaaggaggagagctggaaaggcagcgtgccggcact
gtgactggcgtttctgtgaatatttcctgcttgctgtcagtgatgttgtttccttatatg
ccagcggtcagccagaccatcagggatcaactcaacgctcctcagtcttgtatcaatacc
atgctgaaaggcaccggaacctttgtgtgtgctctgagcgcaggccaccgcattggcact
gtcagtccgttatttcagaaactggaggctgaccagatcgaagctttgaagaaacgattt
ggtggacagcagaaaacgcttcagaacaacgccagtgctcaacctgctgctgcagctgct
cctgctgttgatgtcaacgcaacaacggtggctggagtggacccggagaaagccaagcag
ctcacacaagctgtggctgagcagggggacaaggttcgagcactgaaagtccagaaggcg
gagaaggacgtggtcgcagcagaggtgtccaaacttttggatcttaagaaacaactagct
ctcgctgaggggaagagccctgagcctgcacctcagaagggcaagaagaagtga
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