Nematolebias whitei (Rio pearlfish): 119412425
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Entry
119412425 CDS
T08042
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00260
Glycine, serine and threonine metabolism
nwh00630
Glyoxylate and dicarboxylate metabolism
nwh00670
One carbon pool by folate
nwh01100
Metabolic pathways
nwh01200
Carbon metabolism
nwh01230
Biosynthesis of amino acids
nwh01240
Biosynthesis of cofactors
nwh04981
Folate transport and metabolism
Module
nwh_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
119412425 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
119412425 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
119412425 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
119412425 (shmt2)
Enzymes [BR:
nwh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
119412425 (shmt2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
119412425
NCBI-ProteinID:
XP_037535355
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Position
7:34559782..34583825
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AA seq
501 aa
AA seq
DB search
MLSFALKQLTRPLYHRAPVCLSVRLQQSHAATRTSDEDRPWTGQESLAEDDPEMWALLQK
EKDRQSRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQKR
ALEAFDLNPEKWGVNVQPYSGSPANFAAYTAVLNPHERLMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNPATGLIDYEQMEMTAKLFRPKLIIAGTSAYARLIDYARIKKLCT
EINAYMLADMAHISGLVAAKAIPSPFDHADLVTSTTHKSLRGARAGLIFYRKGVRSVDKK
GKEIMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALKQAQAPMFREYIAQVLKNSKAMAA
ALLSKGYTVVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEDDFVQVVEFMDEGFKIALDVKKKTGKLQDFKNFLLQDPETVARIA
DLRHRVEAFARPFPMPGFPDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcattcgctctcaagcaactcacacggccactgtaccaccgggcccctgtttgc
ctcagtgtgcgtctccagcagtcccacgcagccacccgtacatcagatgaagatcgccct
tggactggtcaggagagcctggctgaggatgaccctgaaatgtgggctctgctgcagaag
gagaaggacagacagagccgtggtttggagctaattgcatcggagaatttctgcagtcga
gcagctctggaagctcagggttcctgcctgaacaacaaatattcagaaggctacccaggg
aaaaggtactacggtggagctgaggtggttgaccaaattgaacttttatgtcagaaacga
gctttggaggcctttgacctgaacccagagaagtggggtgtcaacgtccagccgtactct
ggttctcctgctaactttgctgcctacaccgctgtgctcaacccccatgaacgtctgatg
ggcttggacctgcctgatggaggacatttgacacatggctacatgtctgatgtgaagagg
atctctgcaacctcaatctattttgagtccatgccctacaagttaaatcctgcaacggga
ctcatagactacgagcagatggagatgacagccaagctgttccggcccaagctcatcatc
gctggcaccagcgcctatgctcgcctcattgactatgcccgcatcaagaagctgtgcaca
gaaattaatgcctacatgcttgctgacatggctcatatcagtggtttggtggcagccaaa
gcaatcccctccccctttgatcatgctgacctggtcacgtccaccacacacaagtccctc
agaggagcaagggctggtcttatcttttatcgtaaaggtgttcgctcagtggacaagaaa
ggaaaggaaatcatgtatgacctggaagacaaggtcaacttttcggtgttcccctccctg
caggggggacctcacaaccacgccattgctggtgtagctgtggctctcaagcaggcacaa
gcgccaatgttcagagaatacattgcccaggtactcaagaactccaaggccatggctgca
gctctcctcagtaaaggctacacagtagtatcaggtggaaccgacaaccacctggttctg
gtggacctccggcctaagggcatcgatggggctcgagctgagagggtgctggagctcgtg
tcgatcacggccaataagaacacgtgcccaggggacaagagcgccctgaccccgggtggc
ctcaggctgggtgctccagccctgacttccagacagttcaaggaagatgactttgtccaa
gttgttgagttcatggatgagggttttaagattgcattggatgtgaaaaagaagactgga
aagctccaggactttaagaacttccttctccaggacccagagacagtggctcgtatcgcc
gatctgcgacaccgggtcgaggcttttgccaggccgttccccatgcctgggttccccgac
cattag
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