Nematolebias whitei (Rio pearlfish): 119412661
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Entry
119412661 CDS
T08042
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04110
Cell cycle
nwh04218
Cellular senescence
nwh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119412661 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119412661 (rbl1)
04218 Cellular senescence
119412661 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119412661 (rbl1)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
119412661 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
119412661
NCBI-ProteinID:
XP_037535624
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All DBs
Position
7:47392410..47409268
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AA seq
1065 aa
AA seq
DB search
MRGEESSDSESGRMEESSVRRSLETLCQELNMDEQTATEAMDNFTAIWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRCSKLSLIQFFSKMRKWADMSNLSQDF
RLRMDRLERNFEVSTVIFRKFEPIFMDMFQNPQGCEPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNAVLCANRKDLINPAFRGLPPTYRAD
GHASSDTPPPCVLEKLCELHDGLVVEAKGIKQHYFKPYIQKLFQKLILKGNEVLLTEMLD
PQNFIDNNKAINRVYEEYVLTVGDFDERVFLGADADEEIGTPRKVVQERAANQTAAHNQL
QQHVEKSGSLAPSTPLTGRVYLKEKDLLVTPVSSATQSVSRLQSMVTGLRTAPSEHLVHI
FKSCSRDATESILARVKTLGQTFKDHYTNDSEDTPGSHIDFAENRLKLAEILYYKVLENI
LVQETKRLQGRDMSVLLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIISIFKLAPFYFFK
VIEVFIRAEEGLSRDMVKHLNSIEEQVLESRAWTADSALWNALEAAGNKVPTVEEVNFSS
CLDSGSVNGPSHLPLVAHSPIIHPRIREFRSGLGSARKEVPPSPLSVHDRYSSPAAGSAK
RRLFGDDPPAPSAGLNLRASPLPSPAKRLTFGSSSVTPKNMGPGAQTTILSFPLQSKDFG
MGNERTITLIPVQPCDPSGIVTAQFLVTTSPSRTAVVASTSEPQTESGRPRRTGSLALFF
RKVYHLASVRLRDLCLKLDISSELRGKIWTFFERALIHCPDLMNDRHLDQLLLCSVYIIS
KITKDTHTFQDIMKCYRSQPQASSHVYRSVLLRRTPRVHPADENMEVDSASGGESAEKAN
PLAGGTNSGQSGGEVRGDLIEFYNTVFVLKMKSFALRYAANDNRADAPPLSPFPSVRAHP
LSPRRVSQRHSLYVSPHKNSAGCLTPNSYTYRINSSPSKELSDINRMIRQGCVSRKRAFT
MEGDVMMSPMCDSPNKRTCPENGSSQDVLLKRLQDVLSERQSQEK
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaagagtcgtcggattcggagtcggggaggatggaggagagctcggtccgg
aggagtttggagacgttgtgtcaggagctgaacatggacgagcagacagcgactgaagcc
atggacaacttcactgccatctggaacacttacaccctggagggagaggtggtccactgg
ctggcctgttcgctgtacgccgcctgcaggaagggctccactcccactgtgggcaaaggg
ctgatggagggaaactgtgtctcgctcaccaggatcctccgctgctccaaactcagtctg
atccagttcttctcgaagatgaggaagtgggccgacatgtcgaacctctcgcaggacttc
aggctgcggatggaccgtctcgaacgaaactttgaagtctccaccgtgatttttcgcaag
tttgagcccattttcatggacatgtttcagaatccgcagggatgtgagccgccacggcag
ccgcgcagcaggaagcacaggcggctgccgtgccacatcagtgatgtgttcaagttctgt
tggaccctgtttgtctacactaaaggaaactttcggatgatcggcgacgacctggtgaac
tcgtaccacctgctgctctgctgtctggacctggtgttcggtaacgctgttctgtgtgca
aacaggaaggacctcatcaaccctgccttcagaggtttaccccccacgtatcgagctgac
ggccacgcgtcctcagacacgcctcctccgtgcgtgctggagaagctgtgcgagctgcac
gatgggctggtggtggaggccaaaggcatcaaacagcactacttcaaaccatacatacag
aaattattccagaaactgatcctgaaaggaaacgaggtgcttttgactgaaatgttggat
cctcagaactttattgataacaataaggccataaacagggtgtacgaggagtatgtgctg
acagtgggagactttgatgagcgagtgtttctgggagccgatgctgacgaggagattgga
acgccgaggaaggttgttcaggaacgtgctgccaaccaaacggccgctcacaaccaactg
caacagcacgtggagaagtccggctctctggccccgtccacccctctgaccggacgggtc
tacctgaaggagaaggacctgctcgtcacgcccgtctcttcggcgacgcagagtgtcagc
cggctgcagagcatggtgaccggtttaaggaccgcccccagtgaacacctggtgcacatt
ttcaagtcgtgctccagagatgccacagagtccatactggctcgagtcaagactctcggg
caaacctttaaagatcattacaccaacgactccgaggacacgccaggttctcacatagac
ttcgcagagaaccgtttaaaactggcagagatcctgtactacaaggttctggagaacatt
ctggttcaggagaccaaaaggctgcagggcagagacatgagtgtgttgctggagcaggac
atcttccactgctccctcatggcgtgttgtttggaggtggtgttgttctcgtacagctct
cagaggaccttcccctggatcatcagcatcttcaagctggccccgttttacttctttaag
gtgattgaagtgtttattcgtgctgaggagggtctgtccagagacatggtgaagcacctg
aactcgatcgaggagcaggttctagagagcagagcgtggactgcagactctgccctgtgg
aatgccctggaggctgctgggaacaaagttcccacagtggaggaggttaatttttcctcc
tgtcttgactctggttccgttaatggcccgtctcacctgcctctcgtggctcactccccc
atcatccaccctcgaatcagggagttcagatcgggcctgggaagcgcacgtaaagaagtg
cctccttccccactgtcggtccacgacaggtacagctctcccgcagcagggagcgccaaa
cgccgcctcttcggtgacgaccctccagcaccctctgcaggcctgaaccttcgagcgagc
cctctgccgtctccagccaagaggctgacgtttggttccagcagcgtcaccccgaagaac
atgggccccggagcacagactaccatcctgagtttccctctgcaaagtaaagactttggc
atgggtaacgagcggaccattacgctgatcccagttcagccatgtgacccctctggcatc
gtcacggctcagtttctggtgaccacctccccgagtcggaccgccgttgttgcctccacc
tctgaaccccagacagaaagcgggcgaccacgacgcaccggttccctggctctgtttttc
aggaaggtgtatcacctggccagtgttcgtctcagggacttgtgcttgaagttggacatc
tcatcagagctgcgagggaagatctggacgttttttgagcgcgctctcatccactgccct
gacctgatgaacgaccggcacctcgaccagctgctgctgtgcagcgtttacatcatatcc
aaaatcaccaaagacactcacaccttccaggacatcatgaagtgttaccgcagccagcct
caagccagcagccacgtgtatcgcagcgtcttgctgcgtcggactcccagggtgcatcca
gctgatgaaaacatggaggtggactctgcttcaggaggagaatctgcagagaaagccaat
ccgctcgcaggtggcacaaattctggccaatcaggaggggaggtacgtggtgacctcatc
gagttttacaacaccgtgttcgtcctgaagatgaagagctttgcgctgagatacgccgcc
aacgataaccgggcggacgctcctcctctgtctccgttcccgtcggtccgagctcatcct
ctgtcgcctcgccgggtcagtcagagacactcgctgtacgtgtcccctcacaagaactcc
gccggctgtctcacaccaaactcctacacctacaggatcaacagcagcccgtccaaggag
ctgtccgacataaaccggatgatccggcagggatgtgtgagcaggaaacgggccttcact
atggaaggggatgtgatgatgtcacctatgtgcgactcgccaaacaagaggacgtgtcca
gagaacggcagcagtcaagatgtgctgctgaagcgtctgcaggacgtcctgtcggagcgg
cagagtcaagaaaagtaa
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