Nematolebias whitei (Rio pearlfish): 119412780 Help Entry 119412780         CDS       T08042                                  Symbol col2a1b Name (RefSeq) collagen, type II, alpha 1b   KO K19719   collagen type II alpha Organism nwh  Nematolebias whitei (Rio pearlfish) Pathway nwh04510   Focal adhesion nwh04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:nwh00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     119412780 (col2a1b)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     119412780 (col2a1b)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:nwh00536]     119412780 (col2a1b) Glycosaminoglycan binding proteins [BR:nwh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    119412780 (col2a1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  119412780 NCBI-ProteinID:  XP_037535743 LinkDB All DBs Position 7:33603907..33658356 Genome browser AA seq 1337 aa AA seqDB search MFSLLDSRTVLLLAATQVCLLAVVRCQDYDQEDAFSCVQDGQSYGNQDIWKPEPCRICVC DSGTILCDEIVCEELKDCPKPEIPFGECCPICAADPSSPSGVPGAKGQKGEPGDITDVVG PRGPSGPTGPPGEQGPRGPRGEKGEKGSPGPRGRDGEPGTPGNPGPPGPPGPNGPPGLGG NFAAQMSGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGSPGEAGESGQSG PMGPRGPSGPPGKPGDDGEPGKPGKSGERGPTGPQGARGFPGTPGLPGIKGHRGYSGLDG AKGETGALGAKGESGAPGESGAPGPMGPRGLPGERGRPGPSGAAGARGNDGLSGPAGPPG PVGPAGALGFPGSPGSKGAPGERGPSGASGPKGATGDPGRPGESGLPGARGLTGRPGDAG PQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGASGLPGKSGEKGLAGAPGLRG LPGKDGETGSAGPPGPAGPAGERGEVGQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEGG PAGATGPRGERGFPGERGAAGPQGLQGPRGLPGTPGTDGPKGAIGPAGAAGAQGPPGLQG MPGERGGAGIPGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPSGPNGEKGESGPTG PSGAAGVRGAPGDRGETGPPGPAGFAGPPGADGQPGTKGEQGESGQKGDAGAPGPQGPSG APGPAGPTGVSGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPSGPAGPPGKDGPKG VRGDSGPPGRQGDAGLRGSAGTPGEKGDAGEDGPPGPPGPSGPQGLAGQRGIVGLPGQRG ERGFPGLPGPSGEPGKQGATGGAGDRGPPGPVGPPGLTGPAGELGREGNPGSDGPPGRDG AAGIKGDRGNTGPAGAPGAPGAPGAPGPVGPTGKQGDRGESGAQGPAGSPGPAGARGMPG PQGPRGDKGEAGESGERGQKGHRGFTGLQGLPGPPGQSGDQGATGPAGPAGQRGPPGPVG PGGKDGSFGQPGPIGPPGPRGRSGESGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGQTE KSPDPLRYMRADQAAGNLRQHDAEVDATLKTLNNQIENIRSPEGSKKNPARTCRDLKLCH PDWKSGEYWIDPNQGCTVDAIKVFCNMETGESCVYPKPAKVPRKNWWSSKSKDRKHVWFG ETMNGGFQFSYGDDSLAPNTAAIQMTFLRLLSTEASQNLTYHCKNSVAYMDASTGNLKKA VLLQGSNDVEIRAEGNSRFTYSVMEDGCSRHTGHWGKTVIEYRSQKTSRLPLVDIAPMDI GGADQEFGVDVGPVCFL NT seq 4014 nt NT seq  +upstreamnt  +downstreamnt atgttcagcttgctggattcaaggactgtactgctacttgcagcaacccaagtttgtcta ttagccgttgtgagatgtcaggattatgaccaggaggatgcttttagctgtgtacaagac gggcagagttatggcaaccaggacatatggaaaccagagccttgtcgcatctgtgtgtgc gacagtgggacaattctgtgtgacgaaattgtctgcgaggagctaaaagactgccccaaa cctgaaatcccattcggagagtgttgccccatctgcgctgctgacccatcttcaccttct ggagtacctggagctaagggtcagaagggagaacctggagacattacagatgttgtagga ccaagaggaccatctggcccaacgggcccaccaggagagcaaggaccccgcggaccaaga ggagagaaaggagagaagggaagccctggtcctcgtggcagagatggtgaacctggtacc cctggaaaccccggaccccctggacctcccggacctaacggaccccctggccttggtggg aactttgcggctcagatgtctggaggttttgatgagaaggctggcggcgctcagatgggt gtgatgcaaggaccaatgggccccatgggacccagaggaccacctggcccctccggagca cctggcccacaaggtttccaaggcagcccaggagaggccggagagtctggacaatctggc cccatgggtccccgtggcccctcgggacctcctggaaaacctggagatgatggtgagcct ggcaaaccaggaaaatcaggtgaacgtggacctactggacctcagggcgctcgtggattc ccaggaactcctggtcttccaggtatcaagggacacagaggttactcaggtctcgatggt gcaaagggagaaacaggcgctctcggtgctaagggggaatctggtgctcctggagagagc ggtgcacctggacccatgggcccccgcggtttacctggcgagagaggacgccctggaccc tctggagctgctggagcacgtggaaatgatggcttgtctggtcctgctggtcctcccggt ccggttggtccagctggagctctaggcttccctggctctcctggttcaaagggagccccc ggtgagcgcggaccctcaggagccagtggtcccaaaggtgccactggagaccccggccgt cctggagagtctggtcttcctggagccagaggcctgacgggtcgtcctggagacgctgga cctcagggcaaagttggaccctctggagctcctggtgaggatggccgtccaggcccccca ggcccccagggagcccgtggacagcctggtgtcatgggatttcctggacccaaaggagca tctggcctgcctggcaagtcaggtgagaaaggactggctggagctcctggtctaagaggt ctgcctggcaaagatggagaaaccggctccgctggaccccctggccctgctggtcctgct ggggagagaggagaggtgggacaacctggtccatcaggcttccagggtcttcctggacct cctggacctcctggagaaggaggcaagcctggagaccagggtgttcctggagagggtgga cctgctggtgcaactggacccagaggagagcgtggtttccctggagagagaggagctgct ggccctcaaggtctgcagggacccagaggcctgcctggaactcctggaaccgatggaccc aaaggagccattggacctgctggtgctgcaggagctcaggggcccccgggcctgcagggt atgcctggagagagaggaggtgctggcattccaggacccaaaggagacagaggtgacgtt ggagagaaggggcctgaaggtgctcccggcaaagatggtggcagaggtctcactggtccc atcggtcctcctggaccttctggtccaaacggtgagaagggagaatctgggcctactgga ccttctggagctgctggtgttcgcggtgctcctggtgacagaggagagactggacctcct ggacctgctgggtttgctggacctcctggtgctgatggtcagcctggaaccaagggagag cagggagagtctggacagaagggagatgctggtgcccctggaccccaaggaccatctggt gcccctggacctgcaggtcctacaggagtttctggacctaaaggtgctcgtggtgctcag ggacctcctggtgctactggtttcccaggagctgctggccgagttggacctcctggtccc aatggtaatcctggaccttctggtcctgccgggcctcctggtaaagatggacccaaaggt gtaagaggagattctggacctccaggaagacagggtgacgctgggcttcgtggttctgcg ggaactcctggagagaaaggagacgctggagaggatggtcctcctggtccaccaggtccc tcaggtcctcagggattggctggtcagcgcggtattgttggtctgcctggacagcgaggt gaaagaggcttccctggtctgcctggaccttctggtgaacctggcaagcaaggagctact ggtggtgctggagaccgtggaccccctggacctgttggacctcctggactcactggacct gcaggggaacttggcagagagggtaaccctggctctgacggacctccgggtagagatgga gctgctggaatcaagggcgatcgtggtaacactggtcctgcaggtgctccaggtgctcct ggtgctcctggtgctccaggtccagtgggacccaccggcaagcagggagacagaggagag tctggtgcacaaggacctgctgggtctccaggtcctgctggagccaggggaatgcctgga ccccaaggacctcgtggtgacaagggagaggctggagagtctggtgagagaggacagaaa ggacacagaggttttactggactgcagggtctccctggacccccgggtcagtctggagac cagggcgctactggacctgctggacctgctggacaaagaggcccacctggacctgttggc cctggtggaaaggatggttcatttggtcagccaggacccatcggtcctccaggacctcgt ggtcgctctggagaaagtggccctgctggtccacctggaaaccctggaccccctggtcca cccggtcctcccggccctggtattgacatgtctgcctttgctggtcttggtcaaaccgag aagtcgcccgatcctctcaggtacatgagggctgaccaggctgctggaaatctccgtcag cacgacgccgaggttgacgccacgctcaaaactctcaacaaccagattgaaaacatccgt agcccggagggatccaagaagaaccccgctcgcacctgcagagacctgaagctgtgccac cctgactggaagagcggcgagtactggattgatcctaatcagggctgcactgtagatgca atcaaggtcttctgcaacatggagacaggagagtcctgcgtctaccccaaacctgccaaa gtccctcgcaagaactggtggtccagcaagagcaaagaccgcaaacacgtctggtttggc gagacaatgaatggaggattccaattcagttatggtgacgacagcctggcgcccaacact gctgccattcagatgacgttcctgagacttttgtccacagaggcgtcacaaaatctcact taccactgcaagaacagcgtggcctacatggacgcttcaactggcaacctgaagaaggcc gtgctgctgcagggctccaacgacgtggagatcagagccgagggcaacagccgcttcacc tacagcgtcatggaggacggatgctcgagacacacaggacactggggcaagacagtgatc gaatacaggtcgcagaagacctctcgcctgccccttgtggacattgcccccatggatatt ggtggagcagaccaggagtttggagtcgacgtcgggccagtctgtttcttgtaa

DBGET integrated database retrieval system