Nematolebias whitei (Rio pearlfish): 119412800
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Entry
119412800 CDS
T08042
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119412800 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119412800 (smarcd1)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119412800 (smarcd1)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119412800 (smarcd1)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119412800 (smarcd1)
PBAF complex
119412800 (smarcd1)
GBAF(ncBAF) complex
119412800 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
119412800
NCBI-ProteinID:
XP_037535762
LinkDB
All DBs
Position
7:36695444..36708901
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AA seq
515 aa
AA seq
DB search
MAARGGFQTTPTGGGGGAMGPGPPVPVAGPGMGPGTPSGRMGPSSATQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGSSPVSRPGMPGVIDPSRKRPAPQQIQQVQQQQNRN
QHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagagggggctttcagacaacgccgacgggtggtggcggtggagcaatggga
cctggaccaccagtaccggttgcaggaccaggtatggggcccggtaccccctctggaaga
atgggaccgtcgtcggccacgcagaaccacatgtaccgctctccgatgcccgggcctgga
tacccgagaccaggcatgcctccatccagccgtatgacccctcagggaccagccatgggc
cccccagggtatggcagcagccctgtgtctcgccccgggatgcctggggtgatagaccct
tctcgaaaaaggccagcccctcaacagattcagcaggttcagcaacagcagaaccgcaac
cagcacacaaagaagaagaaaatggctgataaaattctacctcagaggatcagggaactg
gtcccagagtctcaggcttacatggatcttctggcctttgagaggaagttggaccagacc
atcatgcgcaagaggcttgacattcaggaggcccttaaaaggcctattaagcaaaaaaga
aagctgcggatcttcatatcgaacactttcaaccctgcaaagcctgatgctgaggatgga
gagggcacagttgcatcatgggagctgcgtgttgaagggcgtcttctggaagatacagct
gtctccaaatatgaagccaccaaacaaaaaagaaagttctcatcattcttcaagtctctt
gtgattgaattggacaaagacctgtatggaccagataatcacctggttgaatggcatagg
actgccaccacccaggagactgatggtttccaagtaaagaggcccggtgatgtgggagtt
cgctgcaccgtcctcctcatgcttgactaccagccccctcagttcaagctggacccccgt
ctggcccgtatgttgggtatccacacgcagaccagacctgtcatcatccaggctctgtgg
cagtacgtcaaaacacacaaactccaagacccacatgagcgcgagtttattaactgcgat
aaatacctgcagcagatttttgagactcagcgaatgaagttttctgaaatcccacagcgc
ttgcatgcactgctgatgcctccagaacccatcatcataaatcatgtgatcagtgtggat
cctaatgaccaaaagaagacggcttgttatgacattgacgtagaggtggacgacacactg
aagacccagatgaactccttcctgctgtccacagccagccagcaggaaatagcaggactg
gataacaagatccatgaaactattgagactatcaaccaactgaaaacccaaagggagttc
atgttgagttttgccagagatcctcagggatttatcaacgactggcttcagtcccagtgc
agagacctgaagactatgactgatgtggtgggaaacccagaagaggagcgaagagcagag
ttttactaccagccttgggctcaggaggccgtctgtcgctacttctactccaaagtccag
cagaggcgacaggagctggagcaggcgctcggcatcaggaacacttga
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