Nematolebias whitei (Rio pearlfish): 119412836 Help Entry 119412836         CDS       T08042                                  Symbol col7a1 Name (RefSeq) collagen alpha-1(VII) chain   KO K16628   collagen type VII alpha Organism nwh  Nematolebias whitei (Rio pearlfish) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen fn3 VWA Kunitz_BPTI VWA_2 Interfer-bind DUF4992 Motif Other DBs NCBI-GeneID:  119412836 NCBI-ProteinID:  XP_037535800 LinkDB All DBs Position 7:41011883..41121756 Genome browser AA seq 3123 aa AA seqDB search MWSWMFTVTFLLSSMKRAEAQGRCNNVQAADIVFLIDGSSSIGRSNFLQVKAFMAGIVKP FESAVSDSGIRFGAVQYSDTSRVEFTLNTYLNGTQLINAVQDISYKGGNTRTGAGLKFVY DSFFNPASMRDVPKVTILITDGKSQDGVQEPSQKLRGQGVKVFAVGIKSADRNELAQISS QPSSDFTSFVGDFKLLNTLLPLVSPQVCSVAGGVYASDEAFSGPSNIQFTGQTTDSLRLR WNPAGGPVTGYAIQYVPLSGLGQPIIAELRQESVSATQRTFTARELRSGTDYLVTVIAQY PNSVGESTSAKQRTRSLPGVSSLRLVQAGFFSLSVGWDKSSTSLQGYRLTYGPRGQPAAQ LLELSLPADATSVTLESLQPDTEYVINLYALFPRNAATPSILNARTLRLEAVQQLSVDTV SEGSVRVRWRHVTGAQLYRLVWGAFTGQTFETVELAGDSEFFTLSRLQPETEYIVTVIPL YERNTEGPAATARFKIERAELQVLNAAVSGPSSIRLNWRLIQSALGYRLEWREGEGGRVQ SLSFPRSTTSYELTGLRPQTKYIFTLYTQLEGREVATPVSTEGREDQPVGSVSNLRVVES LGSIVRLGWTGVTGATQYRIIILNTDDGTEKLLTIPGNQTTFDLKDLIVGVSYGVSVTAE VGENEGEPVTVYIKPEQEIRTVSNVRVTNANSRRIRIAWDGVTGATGYRVTWKQGNNAEQ ARVLGAEATAFTMDNLQPDEALVIGVAAVVDQRVGEEVTLSARTNPSSGTLSGFRITDIS AQRIRIAWSPVFRATGYKITWRRDDGLETTRTVASSVSSYTIDGLQPNSAYTVQVSALAG SREGTPSILNVRTELDQSVVGTVTSLQVQETLGEVIRVTWVGVQGATAYRISWRRTDGGE ERSQLVGGDVAAVDLDQLDPGVQYEVQVKALVQNREGTPVFATITTPGYNTRPPSLPTTT LRATEVTHDSVRLDWAFVPGTTGYILQWKEETDVGRGLSVSLPPSSSSYLVTGLRLGRRY RFTIQPTFSSGLAAETFVDERTVCLGGRLDVVFLVPASTDRIDLERPLRELLTSVAGSLA TIGPRDSQVGVVVYGFRPKIWFLLNRHTRSDTLLQEIQSTPYDESPGSNIGEAVTFARQY LLIPSAGRRPRVPGAVVIIADRKSVDNLTLAANSLRTAGVTVLAVAIDQADTEELRRAVT DRSTQNILYTPDAAQLNSLHADLADLLCGIARIPETSPGSDQCTVQCPRGEKGDRGEQGE RGRDGADGRKGEPGRDGLPGREGPRGPEGRPGPPGQSVPFDPSLGVKGGKGERGFPGVDG NPGLPGRPGAPGNAGVPGSQGLPGVRGSPGEPGGQGPLGPKGDRGERGEPGSAVSGGGLP GRKGEPGIPGIPGTPGRPGSDGAKGSHGVSGTPGQDGRPGIPGAPGVSIKGDKGSPGERG PSGVGSGVAVKGERGSPGIPGTPGTSGARGPLGPQGSKGEKGDEGAGLPGPPGKQGEPGD RGLRGPAGELGSKGDRGQPGEPGTRGDRGERGPAGETGEKGDAGKPGTSGSPGLRGLPGP SGSQGEKGNEGARGEPGRNALGLPGNKGDQGGRGLPGSEGPRGEKGEPGQRGEKGSPGGG SDGAGSKGEPGERGVPGLNGRPGPKGDSGEPGERGENGRPGLSGKPGIPGKQGDKGDKGD DGTPGEQGLSGKPGERGLRGLAGQPGRPGEKGDVGDPGEHGRNGSPGPAGPRGEKGELGP QGPPGPPGKLADAQALLRGERGEKGDAGDPGEHGSKGQKGEAGTHGAPGLRGSEGPRGPA GTKGDAGERGAPGEKGDRGASGLDGRPGLDGKPGSSGPPGLRGDPGKQGDSGRDGLPGLR GEQGSQGPIGPPGNPGIPGKAGEDGKPGSPGKMGEDGVPGEDGRKGDKGEAGAAGRDGRD GQKGDHGPAGPAGPSGPPGPPGLPGSIGPPGQVVYVKGVEAAPVPGPQGPPGTPGVPGIP GAGGARGERGLPGPKGETGDPGEDGAPGKPGTAVDVQKALASFGIQVSDLKEVVDEKDTM SSPSVQKAERGEKGERGEAGARGPSGADGARGFPGERGIKGEQGERGQTGPTGLPGRAIG ERGPEGPPGPAGEPGKPGIPGVPGRAGELGETGRPGEKGERGDKGDKGNAGLVGLAGPAG PQGEKGAPGESVLLGTPGLRGPPGENGEPGLTGPSGPKGDRGFVGPRGEKGDRGEVGEKG RSGSLGEPGQPGKPGQDGKPGPAGPAGPPGQPGNPGENGIRGPTGPLGPTGQPGPQGLKG NQGEPGVGVQGPPGAQGSTGLPGPPGPPGAVGPQGPPGLSGQVGESGKPGVPGRDGVPGK EGIPGLPGKQGIAGPQGQHGLKGEQGDSGPPGKAVAGPPGSKGEMGPPGVTLPGVAGERG LPGEKGNKGEKGPAGTKGDRGTSGESGERGEDGQQGSAGPKGDKGEKGIGPAGPPGHVGP PGLKGDPGLPGSAGPPGPQGKAGDPGLLGVRGENGQPGPPGPSGERGLQGFAGRPGNAGA PGPSGPPGLAGSPGTNGVKGDKGDVGVGIPGSRGERGDPGPRGEDGRAGLDGERGSTGPS GVRGTRGEKGDSGPQGEKGEKGDTKLVGGPAGEKGNKGETGDRGPKGTQGEKGVKGQEGP SGEQGQRGEPGERGSTGFPGARGPGGQKGESGGPGVPGESGLPGKDGLSGRKGDKGEDGV VGLRGIKGDRGSKGVCGASGPKGEKGDAGIHGRSGLPGRKGEQGDVGPLGAPGSPGKEGL IGPKGERGFDGVSGAKGTQGEKGERGSPGVPGPPGPRGTDGPPGLSGPQGPAGAKGPEGL QGQKGERGPIGPAMVGPRGIPGIPGERGEPGEIGPDGSKGDKGEAGMTEDEIREYVRSEM NQHCACGGSDPDVESQPAFRARPTTDKLLALKGRELRVVLNTNDPDYEHIYSIEALDDPV DDLLYFSTQAANESDGEDYKDSEKNGNVDADKSAIADVQTKATADEKTEQVAPLTADKSG SVRSKRTVKGEGSTDVCLLPMDEGDCHRYTLRWYFNSHSGACKPFVYGGCKGNDNRFLQQ EECEQVCLREVKVKTGIHPGREHLSNGTYAIECEHLPTQVGDDDELQSGGDPDEGNEHAD ELP NT seq 9372 nt NT seq  +upstreamnt  +downstreamnt atgtggagctggatgttcaccgtcactttcttgctgtcctccatgaaacgtgctgaagct cagggcaggtgtaataatgtgcaagcagcagatattgttttcttgattgatgggtcttca agtattggccgatcaaactttcttcaagtgaaggccttcatggctggaattgtaaaaccc tttgagagtgctgtcagcgactcgggaattcggtttggggctgtgcaatacagtgacacg tcaagggttgagttcaccttaaatacatacctgaatggcactcagcttatcaacgcggtg caggatataagctataagggtggaaacacgcgcactggagctggtcttaagtttgtctat gatagtttcttcaaccctgcatccatgcgggatgtcccaaaggtcactatcctgatcaca gatgggaaatctcaggatggtgtgcaggagccatcacagaagctgcgcggtcagggagtg aaagtttttgcagtgggaataaagagtgcagacaggaatgaactggctcagatatcatcg cagcccagcagtgatttcacctcttttgttggggactttaaactactaaacacacttctt cctcttgttagccctcaagtgtgttcagttgcaggaggagtctatgcgagtgatgaggca ttttctggtccatccaacattcagttcacaggccagacaacagactctctcaggctccgc tggaatcctgcagggggacctgtgactggctatgcaatccagtatgtgccactctctggt ctgggccagcccatcattgcagaattgcgacaggaaagcgtctcagccactcagaggacc ttcactgcacgagagctcaggtcaggaacagactaccttgtgactgtcatcgcccagtac cccaacagtgttggcgagtcgacttctgccaagcaaagaaccaggtcgttaccaggtgtc tccagtctacgcttggtgcaggcaggcttcttctctctctctgttggatgggacaaatct tcaacttccctccagggctacagactcacctatgggccccgaggtcagccagcggctcag ttactggagctgtcactgcctgcagacgccacatctgtcaccctggagtctcttcagccc gacacagagtacgtcatcaacctgtacgctttgttcccccgcaacgctgccaccccgtcc atcctcaatgctcgaaccttgcgtctggaggcggtgcagcagctgtcagtggacacggtg tcagagggcagcgttcgtgtgcgatggcggcacgtcactggtgcccaactgtaccgatta gtatggggagccttcacaggtcaaacatttgagacagttgagcttgctggagacagtgag ttctttactctgtccaggctccaacctgaaactgaatacatcgtcacggtcatcccgctg tatgagcgaaacacggaagggcctgcagccacagccagattcaagatagagcgtgcagaa ctgcaggttctcaatgcagccgtctccggaccctcatcgatccgactcaactggagactc attcagtctgcgctggggtaccgcctggagtggagggagggggaaggagggcgtgttcag agcctgtcctttcctcgaagcaccacgagctacgagctgacaggccttcggccacaaaca aaatacatcttcaccttgtacacgcagcttgaagggcgggaggtggccacgcccgtctcc actgaaggcagagaggaccagccggtgggaagtgtgtccaacctgagggtggtcgagtca ctgggaagcattgtcagacttggctggacgggtgtaactggagccacacagtaccgaatc atcatcctgaacacggatgatggaacagaaaaactcctaactattcctggaaaccagacg acctttgacctcaaagatctgatagtcggagtgtcgtatggcgtcagtgtcacagcagag gtgggagagaatgagggcgaacccgtgactgtctacatcaaaccagaacaagaaataagg acagtgagcaatgtcagagtaaccaacgcaaacagtcggagaattcgaattgcctgggat ggagttactggtgcaacgggttacagagtcacctggaaacaaggaaacaatgcagagcaa gctcgtgttctgggagcagaggccacagctttcaccatggacaacctgcagccggacgag gcactggtaattggtgttgcagctgttgttgatcagcgtgttggagaagaggtcacgctg tctgcacggactaacccctccagtggaacgttgtctggatttcgcatcacagatatctcg gcacagagaatacgcattgcatggtcgccggtttttagggcaacaggatacaagatcact tggcgtcgtgatgatggacttgaaacaactcgtaccgtagcgtccagcgtttcttcctac actattgatggtcttcagccgaactcagcctacactgtccaagtttctgccctggctggc tctcgagagggaactccttccattctgaatgttagaacagaattagaccagtcagttgtt gggaccgtgacatctttgcaagtccaggagaccctaggagaagttatccgagtcacttgg gttggtgtgcagggagcaacagcttatcgcatctcttggaggagaacagatggtggtgaa gagaggagccagctggtgggtggagatgtggcagcagtggatctggaccagcttgaccct ggagttcagtatgaggtgcaggtcaaggctttagttcaaaacagagaaggaacccctgtt tttgccacgatcaccacacctggttataacacccggcctccctcactcccaaccacgacg ctacgagcaacagaagttacccatgattctgtgcggcttgactgggcttttgttccaggc acaacagggtacatcctccagtggaaagaggagacggacgttggccgaggcttgtctgtt agtcttcctccgtcgtccagctcatacctggtgaccggtctgcgtctgggccggcgatat agatttaccatacagcccactttttcaagcggactggcagcagagacctttgtagatgaa cgcactgtgtgtctgggtggacgtctcgatgtggtgtttctggtgcctgcttctaccgat cggattgatctggaaagacctctgcgtgaactcctcacaagtgtagcggggtcactcgcc actatcggacccagagactcacaggtaggggttgtcgtttatggcttcagacccaaaata tggttcctgctcaatcgtcataccagatctgacacgctgctccaagaaatccagtccaca ccctatgatgaaagcccagggagtaacattggtgaggcggtgactttcgctcgtcagtac ctgctgatcccctcagctggacggagaccccgggtgcctggtgctgtcgtcatcatcgct gacagaaagtctgtcgacaacctgaccctcgcagccaacagtctgagaactgcaggtgtg acggtgctggctgtggccatagaccaagcagacacggaggagctgcgtcgagctgtgacg gaccgcagcacccagaacatcctgtatactccagatgcagctcagctcaactcactacat gctgacttggcagacttgctgtgtggtatcgccagaataccagagacgtctccaggatca gaccagtgcaccgtccagtgtcctcggggtgagaagggcgaccgtggtgagcagggggag aggggtagagatggtgcagatggacgcaagggggagcctggtcgtgatggtttgccaggg agggagggccccagaggtcctgaaggacgacctggtccaccgggacagtcagtccccttc gacccctctctgggggttaaagggggaaagggggagagaggttttcctggtgttgatgga aatccagggttaccgggacgaccaggtgctcctggaaatgcaggtgtcccaggctcacaa ggccttcctggagtcagaggaagcccaggtgaaccaggtggacaggggccgctgggacca aagggggatagaggtgaaaggggtgagccaggctcagctgtatctggagggggtcttcca ggaaggaaaggagaaccaggcatcccaggaataccgggtactccaggtcgaccaggcagt gacggggccaaaggatctcacggagtttcagggacaccaggtcaggatggtcgcccaggc ataccgggagctccgggagtttccatcaagggggataagggcagtccaggagagagggga ccttcgggagtgggaagtggggtggctgtgaagggcgagaggggctcccctggaattcca ggaactccaggaacatcaggcgctagagggccactgggacctcagggcagcaaaggagaa aaaggtgatgaaggtgctggactgcctggacctccaggaaagcaaggagaacctggggac cggggtctgcgtgggcctgcaggtgaacttggcagcaagggtgaccgaggtcagccgggt gagcctgggactcgaggagacaggggggagcgaggcccggctggtgagactggggagaaa ggggatgcagggaagccaggaacctcaggatcaccaggactgaggggtttaccaggacca agcggatcacaaggagaaaagggaaatgaaggcgctcgaggggagccgggaagaaacgct ttaggattaccaggaaataaaggagatcaggggggccgaggccttcctggttctgagggt ccgaggggagagaagggagagcctggacaacgaggagagaaagggtctccaggaggaggg tcagatggtgctggatcaaaaggagagccaggagaacgaggagtccctggtcttaacgga cgaccaggacccaaaggagactcaggggaaccaggagagagaggagagaatggacgccca ggactctcaggaaagcctgggatccccggaaaacagggagacaagggggacaaaggtgac gatggcacgcctggagaacaaggactatcagggaagcctggagaaagagggcttcgggga ctggctggtcagcccggacgaccaggagagaaaggagacgtgggagacccaggagagcac ggacgaaatggcagtcctggacctgctggaccgagaggagagaaaggagagctcggacct caagggcctccgggaccaccaggaaaactggctgacgcccaggctctgctgagaggcgag agaggtgagaagggcgatgcaggcgacccaggagagcacggcagcaaaggtcagaaaggc gaagcaggaactcacggagctccaggcctgcgaggttcagagggaccacgggggcccgcc ggcactaaaggcgatgcaggagaaagaggagcacctggagagaagggagacagaggagca tctggcttggatgggcgtcctggtctggatggtaaaccaggctcttcaggaccaccggga ctaaggggtgatccaggaaaacagggcgactctgggagagatggattaccaggattaaga ggcgagcagggttcccagggacccattggtcctccaggaaatccaggaatacctggaaaa gcaggtgaagatggcaaaccgggttctcctggcaagatgggagaggatggagtgcccggt gaagatggcagaaagggtgacaaaggagaagctggagcagctggaagagatggccgtgat gggcagaaaggtgaccacgggcctgccgggcctgcgggcccctctggtcccccgggacct cctggattgcctggcagcattggtcctcctggacaggttgtgtacgtaaagggagtcgaa gctgctccagtcccagggccacaggggcctccaggaacacccggggttcctgggatccca ggagcaggaggagctcgaggggagagaggtctacctggtcctaaaggtgaaactggagac ccaggagaggatggggctccgggtaaacctggaaccgcagtggatgtgcaaaaagctctg gccagcttcgggattcaggtgtctgatttgaaggaggtggtggacgagaaggacaccatg tcgtctccctcagtgcaaaaggcagagaggggtgaaaagggagagcggggtgaagctgga gcgaggggaccatccggtgcagatggtgctcgaggttttccaggagagaggggaatcaaa ggggaacaaggggagagaggacagacgggaccaactgggctcccaggaagagccattgga gagcgaggaccagagggacccccggggcccgcaggagagcctggcaaacctggaatacct ggtgttcctggaagagcaggggaactcggggagactggaagaccaggagaaaagggagag cgaggagacaaaggagataaaggcaatgctggtctagttggactagcaggaccagctggg cctcagggagaaaagggagctcctggggaatcagttctgcttggtacacctgggctcaga ggccccccaggcgagaacggtgagcctggtcttactggaccatcaggacccaaaggagac cggggttttgtgggacctcgtggtgaaaaaggagaccgaggagaggttggagaaaaagga cgtagcggctcattgggtgaaccaggacaaccgggaaaacctggtcaggatggaaaacca ggcccagcagggcctgctggtcctccaggccaaccaggaaacccaggagagaatggcata agggggccaactggccctctgggtcctactggacagccaggtcctcagggtttgaagggt aatcaaggagaaccaggagttggtgtccagggtcctcctggtgctcagggaagcacaggt ctaccaggaccaccaggtcctccaggagctgtaggtccgcagggccccccagggctctca gggcaggtgggtgagtctggtaaacctggagttcctggaagagacggagtcccagggaaa gaaggaattcctggattaccaggaaagcagggcattgctggacctcaaggacagcatgga ttaaagggagagcagggggacagtggccccccagggaaggctgtagctggaccccctgga tctaaaggagagatgggcccacctggtgtaacactaccgggcgtagctggagagcgaggc ctccctggtgaaaagggtaataaaggagaaaaaggtcctgctggcactaagggagacaga ggaacgagtggtgaatctggagagcgtggagaagatggtcaacaaggatctgctgggcct aaaggagataagggagagaaaggcataggcccagcaggcccacctggccatgttggacct ccaggtctgaagggggatccaggccttcctggctcagctggtcctccagggccccaagga aaggcaggagaccctgggctgcttggtgtaagaggagaaaatggacaaccaggacctcct ggaccctcaggggagaggggtctccaaggatttgcaggccgtccaggaaatgccggagct cctggtccttctggacctccaggactggctggctctcctggtaccaatggagtcaaaggg gacaagggggatgttggtgtaggcatccctggttccagaggagagagaggagatccaggg cccagaggcgaggacgggcgagctgggttggatggagagagaggatcaactggaccctca ggggttcgaggcactcggggagaaaagggagacagcggaccacagggtgaaaaaggagaa aagggagacactaagctggtgggaggacctgctggagaaaagggcaacaaaggagaaaca ggtgacagaggacccaaaggtacacaaggagaaaagggggttaaaggtcaagagggtcca tcaggagagcagggtcagagaggagaacctggagaacgaggatccactggatttccaggg gcccggggtcctggtggacagaaaggggaatcaggcgggcctggagtgcctggagaatcg ggtttacctggaaaagatggactctcaggacgtaaaggggacaaaggtgaagatggcgtt gtaggattgagaggaatcaagggtgatcgtggatccaagggggtttgtggagccagcgga cctaaaggagaaaagggtgatgctggtattcatggacgatcaggcctacctggcaggaaa ggtgaacagggtgatgtagggcccctgggtgctcctggaagccccggaaaagagggatta attggacctaagggtgagcgtgggtttgacggtgtctctggagccaaaggaactcaagga gaaaaaggcgaaaggggatcacctggtgtgcctggtcctccaggccccagagggacggat gggcctcccggcctgagtggcccacaaggtccagctggggctaaaggccctgaggggctc cagggacagaagggagaaagaggtccaatcggtcctgccatggtcggtcctcgaggtatc ccaggaatcccaggggagcgaggagaaccaggagagatcgggccagatggatccaaggga gacaaaggagaggctggcatgacggaggatgagatcagagagtacgttcgctcagagatg aatcagcactgcgcgtgtggaggttcagacccagacgttgagtcccagcccgcattcagg gctcggcctacaacagacaaactgctggctctgaagggtcgtgagctgcgagtggtgctg aacaccaacgatccagactacgaacacatctactccatcgaggccctggatgaccctgtg gacgacctgctctacttctccacacaggcagccaacgagtctgatggtgaggattacaag gactctgagaagaacggtaacgtcgacgcagataaatctgcaatcgctgacgttcagaca aaggcaacagctgatgagaaaacggagcaagttgcacctctgactgcagacaagtccgga tcagtcaggtccaagaggaccgtcaaaggggaaggttcaacagacgtatgcctgctgccc atggatgagggcgactgccaccgatacaccctgcgctggtacttcaacagtcactctgga gcctgcaagccgttcgtctacggcggctgtaaaggaaacgacaatcgcttcctccagcag gaagagtgtgaacaggtctgcctcagggaggtcaaagtgaaaactgggattcatccagga agagagcatctctccaatgggacatacgccatagaatgtgagcacttgcccactcaagtc ggtgacgacgatgaactgcagtctggtggagatcccgatgagggcaacgagcatgcagat gagcttccctaa

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