Nematolebias whitei (Rio pearlfish): 119412882
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Entry
119412882 CDS
T08042
Symbol
sorcs3b
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119412882 (sorcs3b)
Membrane trafficking [BR:
nwh04131
]
Endocytosis
Others
Others
119412882 (sorcs3b)
Endosome - Lysosome transport
119412882 (sorcs3b)
Endosome - Golgi transport
119412882 (sorcs3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
DUF7261
ANP
Motif
Other DBs
NCBI-GeneID:
119412882
NCBI-ProteinID:
XP_037535849
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All DBs
Position
1:complement(63363543..63435969)
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AA seq
1237 aa
AA seq
DB search
MALWAFWSVFLLSCATFHLKFGAQADITFHRSVNRFDHLDVAQLEARFAKNTAGIKVSPN
VDNRDEVLNWFKTEAAATLKPSSALEENQTVNKTQVGIEANYSNELQMPGKKCGNSTTAR
PGENKPPERTVSVRGKKMKRSVGAAYNDDVDRSLSGEAQSPERSVESVQGASKSRTEYRR
AGEEARGSSPRQSEPHLDTSTFALSGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGAVT
ESSLWRSTDYGSTYTKLNDKVGSRTVLSYLYVCPTNKQKIMMLSDPEVESAVLISSDEGA
SFEKYPINFNILSLLFHPTQENWILAYSHDNKVYSSMDFGRKWQLVHDNVMPGRFYWAVM
GLDRESDVVHIETRITKGRAQYVKCRAQKCTEGNRQYLFPGHVDTNSLVVQDEYVFTQVT
KSGRASYFVSYMREPFKQMQLPKYCLPKDMHIISTDEKQVFAAVQEWNQNNTYSLYISDS
PGVYFILSLENLRTSRGPAGNLLVDFYKVEGINGMYFANKLVDNHIKTFITYNKGQTWAL
LPAPATDVAGNNLHCILPFCSLHLHLEMSENPYTSGPITSKKSVPGIIIATGTIGTELSS
SNLGMFMTSDAGNSWRQIFDEEHNVWFLDNGGALLAVLHAPTPIRHLWISLDEGKKWDRH
SFSLAPLFVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYMGLFSRRCMDGDYQTWYL
HNKGELCVMGEKQIYMKRRPGNRCMLAQDYSRIYSSEPCLCTAYDFECDYGWERQADGKC
SPAFWFNPNSAAKSCSSSQSFLNSTGYRKVLSNNCKERGRNMFSPKRVACHLRAPQGLRL
STSNGELSATVGSNVTFMIYLDDGDSPSTSIQLDFGDGIKITYSNLSRTDDGIKHIYRMT
GIYRVTASAENSQGSDSSTLFLHVTSPVEHMYFSIPIVAIRGKAANLTAVVWPSHTRTLT
FFWWFDNSSEPIITLEGSISHMFHREGKNKVTVQVACGSTVLQDSKVITVKEFFRSLLLS
FSPALDEHNPDIPEWREDIGRVVRTALSQVSGVPEDQLLVSLYPGLPTTAELFILPDEQT
SNEHKKRSEEALDTISDIFATALNQGLIQFELKANVRIIVYMTHQTLAPLIDANAIHSGS
AMLMLLSVVIVGLAAFFIYKFKRKIPWIHVETEDPHEKDPEVISTVGQNDSMSKVKLSEF
PSQKELMEKELEGRSRGGFGRNMDRIVTREFPNCTNV
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggcactttgggcattttggagtgtttttcttttatcttgcgccacttttcacctcaag
tttggggctcaagcggacataacttttcacagatcagtcaacagatttgatcatttggat
gtggctcagctggaggctcgttttgctaaaaacacagcggggatcaaagtctcgcctaat
gtcgacaacagagatgaagttttaaactggttcaaaacggaggcagccgccactttaaag
ccgagcagtgcgctggaagagaaccaaacagtgaataagacacaggtcggcatcgaagca
aactattccaacgagcttcaaatgcctgggaaaaagtgtggtaacagcacaacggcgcga
cctggagagaataaaccaccagagcgcacagtttctgtcagggggaagaaaatgaaaaga
agcgtgggcgcagcgtacaacgacgacgtggataggagtttaagtggagaggcgcagtca
ccagagaggtccgtggaaagtgtccaaggtgcttccaagtcgagaaccgagtacaggcgc
gctggggaagaagccagagggtcaagcccgaggcaaagtgagccgcacctggacacctcg
acttttgccttgtcgggagactcggcgcacaaccaggcgatggtgcactggtccggccac
aacagcagtgtgatcctgatcttgactaagctgtatgacttcaacctgggcgccgttaca
gagagctcactttggagatccactgattatggcagcacctacaccaaactcaatgacaaa
gtgggttcaaggacagttttaagctacctctatgtctgccctaccaacaaacagaagata
atgatgcttagtgacccagaggtagagagtgctgttctcatcagttcagatgaaggggca
agcttcgagaaatatcccattaacttcaacatcctgagcctcctattccacccgacacag
gagaactggattctggcttacagtcatgacaacaaggtgtacagttcaatggactttggg
aggaaatggcaacttgttcatgacaacgtgatgccaggcagattctactgggcggtaatg
gggctggacagagaatcagatgtggtccacattgagacacgcatcacaaaaggccgtgct
caatatgtgaagtgcagagcccagaaatgcacagagggaaacagacagtacctctttcct
ggacatgtggacaccaactcccttgttgtgcaggatgaatatgtttttacacaggtaacc
aagtcaggtcgagccagctactttgtgtcgtatatgagagaacccttcaaacagatgcag
ttaccaaaatactgtttgccaaaggacatgcatatcatcagcacagatgagaagcaggta
ttcgctgccgtccaagagtggaatcagaacaacacatacagcttgtatatctccgactcc
cccggggtctactttatcctttcattagagaatctgagaaccagcagagggcctgctggt
aacctactggttgacttttataaggttgaagggataaatggcatgtactttgctaacaaa
ctggtggataatcatattaagactttcatcacttacaacaagggacaaacctgggctctg
ctgccagcacctgccaccgacgtggctggaaacaaccttcactgcatactgccattttgt
tcactgcatcttcatctggagatgtcagagaatccctatacgtccggacccatcaccagc
aaaaagtccgtaccaggaatcatcatagcaacagggactattggaactgagctgtcctcc
agcaaccttgggatgtttatgacatctgatgcaggaaatagttggagacagatttttgat
gaagagcacaatgtttggtttcttgacaatgggggggctttgcttgcggttctacatgca
ccaaccccgattcgacacctatggatcagtctagatgaggggaaaaaatgggatcgccac
agcttctccttggcacctctgtttgtggacggagttttaatggagccagaatctgacaat
cacatcatcaccttctttggacacttcagccatcggtcagagtggcaactgatcaagatt
gactacatggggctctttagcaggagatgcatggatggagattatcagacatggtatcta
cacaacaagggagagctgtgtgtgatgggtgagaagcagatctatatgaagcgcaggcct
ggcaatcgttgcatgttggctcaagattattccaggatctactcctcagagccgtgtctc
tgcacagcttatgattttgaatgtgattatgggtgggaacgccaggcggatgggaagtgc
tcgcctgctttttggtttaatccaaatagtgcggctaaaagctgcagctcaagccaaagc
tttcttaacagcaccgggtatcggaaggtgttatccaataactgtaaggagagaggaaga
aacatgttttcacccaagagggtagcgtgtcatctccgagcgccccaaggccttcgactg
tccaccagcaacggagagctcagcgccaccgtaggaagcaatgttaccttcatgatctac
ctggatgatggagactcaccgagcaccagcatccagttagacttcggggacggcatcaag
atcacgtactccaacctgagcaggaccgatgatggcatcaagcacatctacaggatgact
gggatttaccgagtgacagcttcagcagaaaacagccagggatctgacagcagcacgctt
tttttacacgtcaccagtccagtggagcacatgtatttctccatccctattgtagccatc
agagggaaagcagctaatctgactgctgtagtctggccgagccacaccagaactctgacc
ttcttctggtggtttgacaacagctccgagcccattataacattggaaggaagcatctcc
cacatgtttcacagagaggggaaaaacaaggtcacggtccaagttgcttgtggaagcacc
gtgttgcaagactcaaaagtcataactgttaaagagttcttcaggtcactgctgttgtcg
ttttctccggctcttgacgagcacaaccctgacatccctgagtggagggaggacataggc
cgtgtggtgcggacagctctgtcacaggtttctggagtccctgaagatcagctgctggtg
tctctgtacccgggacttccaacaacagccgaactctttatcctgccagatgagcagacg
tcaaatgaacacaaaaaaaggagcgaggaggcgttggacacaatatcagacatttttgcc
actgccctgaaccaaggcctcatccagtttgaactgaaagctaatgttcgcatcattgtg
tacatgactcatcaaactttggctccacttatagatgccaacgccatccatagtgggtcg
gccatgttgatgctgctcagtgtggtaattgttggtttagctgcattcttcatctacaaa
ttcaaaagaaaaatcccatggattcatgtagagactgaagatccccacgagaaagatccg
gaggtgataagcacagtaggtcagaacgacagcatgtccaaggtcaagctaagcgagttt
ccatctcagaaagaactcatggaaaaagagctggagggaaggagcagaggaggatttgga
agaaatatggacagaattgtcacaagggaatttcccaactgtactaatgtctaa
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