Nematolebias whitei (Rio pearlfish): 119412966
Help
Entry
119412966 CDS
T08042
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119412966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119412966
03110 Chaperones and folding catalysts [BR:
nwh03110
]
119412966
04121 Ubiquitin system [BR:
nwh04121
]
119412966
Enzymes [BR:
nwh01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
119412966
Spliceosome [BR:
nwh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119412966
Complex C
U4/U6.U5 tri-SnRNP related factors
119412966
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
119412966
Chaperones and folding catalysts [BR:
nwh03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
119412966
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
U-box type E3
119412966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
zf-NOSIP
Rtf2
U-box
V-set_CD47
Mei5
FOXO_KIX_bdg
Motif
Other DBs
NCBI-GeneID:
119412966
NCBI-ProteinID:
XP_037535905
LinkDB
All DBs
Position
8:1655780..1667574
Genome browser
AA seq
409 aa
AA seq
DB search
MIEQEVKHMKTKTDESLGEKIPQANFRRLSFDHCSLSLQPFEYPVCTEDGVVFDLLSIVP
WIKKYGTNPISGEKLEAKSLIKLNFAKNNEGKYHCPVLYNVFTNNSHIVANKVTGNVFSY
EAVEQLNIKTKSFKDLLTDEPFTRKDIITLQDPTNLDKFNVSSFFHVQNNLKVLDPDEEK
AKQDPAYHLKSTNLETRETLAELYKDYKGDQLLASTMKEPQAKKTDKLNAAHYSTGRVSA
SFTSTAMTPATTHEADAIADDAVRYQYVKKKGYVRLHTSLGDLNLELHCDKVPKAGENFI
RLCKKGFYDGTIFHRCIRNFMIQGGDPTGTGTEIPQANFRRLSFDHCSLSLQPFEYPVCT
EDGVVFDLLSIVPWIKKYGTNPISGEKLEAKSLIKLNFAKNNEGKLFMC
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacaggaagtgaagcacatgaagacaaaaacagacgagtctttaggggagaaa
atcccacaagcaaactttcgacgtctttcatttgaccactgcagcttgtcccttcagccc
tttgagtaccccgtgtgcacggaggacggagttgtgtttgacctgctgagcatcgttccc
tggataaagaagtatggaactaaccccatctctggagaaaagctggaagcaaagtccctc
attaaactgaactttgccaagaacaacgaaggaaagtatcactgccctgttctgtacaac
gtcttcacaaataattctcacatcgttgccaacaaggtgacaggaaacgtgttttcatac
gaggctgttgagcagctaaacattaagacgaaaagttttaaagacttgctgacggacgaa
cccttcaccaggaaggacatcataacccttcaggaccccacaaacctggataaattcaac
gtgtccagctttttccacgtgcagaacaacctgaaagtgttggacccagacgaggagaag
gccaagcaggacccggcgtaccacctgaagagcaccaacctggagaccagagagacctta
gccgagctttataaagactacaagggggaccagctgctggcctccaccatgaaggagccg
caagcaaagaagacggacaaactaaacgctgcccactactccacaggcagagtttctgcc
tccttcacgtccacagccatgacgccggctacgacacacgaagcagacgccattgcagac
gacgcagtgcgttaccagtacgtgaagaaaaaaggctacgtccgtctgcacaccagcctg
ggagacctgaacctggagctgcactgcgacaaggttcccaaagctggagagaatttcatc
cgtctgtgtaagaagggcttctacgacgggaccatcttccacaggtgcattcggaacttc
atgattcaaggaggagatcccactggcactggcacagaaatcccacaagcaaactttcga
cgtctttcatttgaccactgcagcttgtcccttcagccctttgagtaccccgtgtgcacg
gaggacggagttgtgtttgacctgctgagcatcgttccctggataaagaagtatggaact
aaccccatctctggagaaaagctggaagcaaagtccctcattaaactgaactttgccaag
aacaacgaaggtaagttgttcatgtgttga
DBGET
integrated database retrieval system
