Nematolebias whitei (Rio pearlfish): 119412969
Help
Entry
119412969 CDS
T08042
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119412969 (snapc4)
03021 Transcription machinery [BR:
nwh03021
]
119412969 (snapc4)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
119412969 (snapc4)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
119412969 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
NUC129
Myb_Rap1
Motif
Other DBs
NCBI-GeneID:
119412969
NCBI-ProteinID:
XP_037535908
LinkDB
All DBs
Position
8:2152864..2180844
Genome browser
AA seq
1343 aa
AA seq
DB search
MSESLSAERDRIQRQVDELEQSLSVTQNELDMLSSETDDGSDSEDELGQVQCPADLLAQK
EKIQTAIQNLEDMLGPHSPISVSSEDSSSAESDLGLSESVDSCLQLNLVYQQVVQETLDH
LETLLVHNQTQQRDITSQLYGPDKDRTTSSLQHPTKMFLGSFLKPYFRDKLTGLTGRTAF
MCLQMFQRFVSDTLKRSVWTPEEDAQLRELIDKMRIGNFIPYTQMSYFMEGRDPAQLIYR
WTQVLDPSLKKGPWTKQEDRLLLQAVSRYGQRYWWKVRLEVPGRTDSSCRDRYLDCLRKG
VKRGPFDQQEIELLKMLVEKHGVGRWSKIAAEIPHRLDAQCMREWRKLSRLPKRREKRKK
PRRRRGEGGEKKEVKAAASIQRRVGRQTVNIKMKEEEEMTEEEEEEEDVIVQYMDSDEDA
KEEKKKVVQTGEAEEEEEYVIPPMKEWIPAEKNQTDSFLKFRLAALPSSADPQDEKPVRS
TIVRKSGNSVIFGPPPRELRWEERHSSAAMMMVSRDQLRAHLSLMEQESKRANPRPRRGA
LTRVMNRGLDYELQAAITPWIGNLLFAKNKRKTMADILREQAETNEVSFSSVFLLLLHAM
NVDINGCKNMIEKKKVVQAPPPTTSTNMAMDPRRITKLCQQKPSKQEEDEQRELMLQQLQ
EAQREKCRQPPRSQPRLLHQLLPKVTLRLPPNRIPQVFPRCVLLPSPVTQPTVASIQFAP
PAPPFSVSMLPNSSPTVIPLALPTSSVSIGSTVTSNHAVLTTSITSSSTLSPSTRREEEI
TCRGQSRKEVPGVGLSETDGTQEMSSQTVRYSSSSSLQSTAPPPPPPQSCSPSSAKGLSL
APPTSTVLSEPPFFFTALPLRDHDYIAHNAGPTLKHPDPTPQKNLKCKSGGRKRKKEKEE
QQEVGAACAVATQDGKRLRKPSLKAREAKAVQTEAKKKRSSASHPQQKRARRSGSKEAVI
SQTRPLAQAASLCLPPSQTMWVMTPSGLVPVVPPPHAQLAILPSVPCPAPLAPPPLTAES
LRFVDLKPVVSVNSQNPASTTCQSKPLPSAKVLSHDPNHSPSHQTPAKLILPYKGVIKVD
SPKAPPLRREELHFKPALISLEPPEAVRDWLSGRGGVSVPGTKSALPYLPPFVSTLSTLS
ALLRTKKTLTKLSLQLLSGASEPQSSQTDPGSAHSPSDLPDSTSDRRPAENQPSSPPDPP
ASSDQQEEEEEQQVKAVRQLVAERFSSNPAYQLLKARFLSCFTVPALLSTMQPITKKKLS
HNANQEEEEDREEEEQLKKIEERGRKRITERSLLQLDGSAASANHFSGMISRPAADPQRV
PQNQTMETRSEPSCGNWTGSSDC
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccttgtcagctgagagggacaggatccagagacaggtggacgagttggaa
cagagtctctctgtgactcagaatgaactggacatgctgagcagtgagacagatgatggc
tcagacagcgaggacgagctgggacaggtccagtgtccagctgacctgttggcccagaag
gagaagatccagacagcaatccagaatctggaggacatgctgggaccgcacagtccaata
agtgtgtccagcgaggacagttccagtgctgagagtgacctcggtctgtcagagtccgtg
gactcgtgtcttcagctgaacctggtctaccagcaggttgttcaggagacgctagaccac
ctggagacactcctggtccacaaccagacacagcagagggacatcacgtctcagctgtat
ggaccagacaaagaccgaaccacctcgtcccttcagcatccaaccaagatgttcctgggg
agcttcctgaaaccgtacttcagggacaaactcacaggactgacggggaggacagccttc
atgtgtcttcagatgttccagcgtttcgtctcagacactctgaaacgcagcgtctggact
ccagaagaagatgctcagctcagagaactcatagacaagatgaggatcggaaacttcatc
ccctacacgcagatgagttacttcatggagggccgtgacccagctcagctcatctacagg
tggacccaagtgttggacccgagtctgaagaagggcccgtggaccaagcaggaggacagg
ctcctgctgcaggccgtgtctcgttatggacagaggtattggtggaaggtccggttggag
gttcctggacgcaccgacagcagctgcagagacaggtatctggactgtctgaggaagggc
gtgaagcgaggaccttttgaccagcaggagatagagttgctgaagatgttggtggagaaa
catggagtcggtcgttggtcaaagatcgctgcagagatccctcatcgtttggacgctcag
tgcatgagagagtggaggaaactgagccgacttcctaagaggcgagagaagaggaaaaag
ccacgaagaagaagaggagaaggaggagaaaaaaaggaggtgaaggcggcagcttcaatc
cagaggagagtggggaggcaaacagtgaatatcaaaatgaaagaagaggaggagatgact
gaggaggaggaagaggaggaggatgtgatagtgcagtacatggacagtgatgaagacgca
aaggaggaaaagaagaaggtggtgcagactggggaggcggaagaggaggaggagtatgtg
atccccccaatgaaggagtggatcccagctgagaaaaatcaaactgactccttcctgaag
tttcgcctggcagcgctgccttcatcagctgaccctcaggacgaaaaacccgtccgctcc
accatcgtgaggaagtcgggaaactccgtcatcttcggacctcctcccagagagctgcgg
tgggaggagcgtcacagcagcgccgccatgatgatggtgtcacgtgaccagctgcgagcc
cacctgagcctcatggagcaggagtccaaaagggccaatccccgacctagaagaggagcg
ctgacccgagtgatgaacaggggcttagactacgagctgcaggccgccatcacgccgtgg
atcggaaacctgctgttcgccaagaacaagaggaagacgatggcggacatcctgagggaa
caggcggagacgaacgaagtttccttctcctccgtcttcctgctgctcctccatgccatg
aacgtggacatcaatggctgcaagaacatgatcgagaagaagaaggtggtgcaggcccca
ccccccacgacctcaacaaacatggcgatggatccgaggagaatcacaaaactctgtcaa
cagaagccgagtaagcaggaggaggatgagcagcgcgagctgatgctgcagcagcttcag
gaggcacagcgggagaaatgcaggcagcctcctcggagtcagccccgcctcctccatcag
ctacttcctaaggtgactcttcggttgcctcctaacaggattcctcaggtgtttcctcgc
tgtgtcctccttccttctcctgtcactcagccaactgttgcttccattcagtttgctcct
cctgcacctcctttctctgtctcaatgctgccaaactcctctcccactgtcatcccttta
gccctgcccacttcatctgtttctattggctccacagtgaccagtaaccatgctgttctg
accacctccatcacttccagctccaccctgagcccctccacaaggagggaggaggagatc
acctgcagaggccaaagcaggaaggaagttccaggtgtgggtttatcagaaactgatgga
acccaagaaatgagcagtcaaacagtcagatattcttcttcttcctccctccagtctaca
gctcctcctcctcctcctcctcaatcatgctctccttcctctgctaaaggactcagttta
gctccacccacctcaacagtgctcagtgaacctccatttttcttcaccgcgttgcccctt
agggaccatgactacattgctcataatgctggccccaccctcaaacaccctgatcccacc
ccccaaaaaaatcttaaatgtaagtctggaggcagaaagaggaagaaagaaaaggaggag
caacaggaggtgggcgcagcctgtgctgttgcgactcaggatgggaagcggcttcgaaag
ccaagtctgaaggccagggaagcaaaggcggtccagactgaagcaaagaagaagagaagc
tctgcctcccacccgcagcagaaacgggcccgcagatccggctcgaaggaggccgtcatc
agtcagactcggccccttgctcaggctgcgtcattgtgtttacctccaagtcagaccatg
tgggtcatgaccccttctggacttgttccagtggtaccacctccacatgcacagctggca
atcttaccgagtgtcccctgcccagctcctctggctccgccccctctcactgcagaaagc
ctgcgctttgttgacctgaaaccagtcgtgtccgtaaattctcaaaatcctgcctcaacc
acctgtcagtccaagcccctcccttcagccaaggtattgtcacatgacccaaaccatagc
ccctcccaccagactcctgctaaattgatcctgccatataagggtgtgatcaaagtggac
tcacccaaggctcctcccctcaggagggaggagctgcactttaaacccgccctaatatct
ctagagcccccagaggctgtgcgtgattggctgagtgggcgggggggcgtgtctgtgcct
ggaacgaagtcggccctcccctacctgcctccgtttgttagtactctgagcacgctcagt
gcgctgcttcggaccaaaaagactctgacaaagttgtctctgcagctgctgagtggcgcc
agtgaaccacaatcctctcagactgatcctggttctgctcactccccctcagacctgcca
gactccacgtcagaccgcagaccagctgaaaaccaaccaagtagcccgcctgatccacct
gccagctcagaccagcaggaggaggaggaggagcagcaggtgaaggcggtgcgtcagctg
gtggctgagcgtttctcctctaaccccgcctaccagctgctaaaggctcgcttcctgtcc
tgcttcactgtccccgccctcctgtccaccatgcagccaatcacaaagaagaaactttca
cataacgccaaccaggaggaggaggaagacagagaagaggaagagcagctgaagaaaatc
gaagagcgaggaagaaaaagaataactgagagatctttgctgcagcttgatggttctgca
gcttcggccaatcacttctcaggcatgatcagccggcccgccgcagacccacaacgggtt
ccacagaaccaaaccatggaaaccagatccgagccatcctgtggaaactggaccggatca
tcagactgttaa
DBGET
integrated database retrieval system
