Nematolebias whitei (Rio pearlfish): 119413025
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Entry
119413025 CDS
T08042
Symbol
plat
Name
(RefSeq) tissue-type plasminogen activator
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
119413025 (plat)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119413025 (plat)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nwh00536
]
119413025 (plat)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
119413025 (plat)
Peptidases and inhibitors [BR:
nwh01002
]
Serine peptidases
Family S1: chymotrypsin family
119413025 (plat)
Glycosaminoglycan binding proteins [BR:
nwh00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
119413025 (plat)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
EGF
DUF1986
hEGF
EGF_2
Trypsin_2
JAG1-like_EGF2
DUF316
cEGF
Motif
Other DBs
NCBI-GeneID:
119413025
NCBI-ProteinID:
XP_037535966
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Position
8:complement(12040239..12047174)
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AA seq
563 aa
AA seq
DB search
MLMQVELLRTKRGTRFYRVLCVDSETSAVRSFGDTWLRWKGQRVEYCRCALRGRELCHFV
PVINCYVSQCYNGGTCKEAFYSSQYICQCPPGFSGAHCEINMNEKCVVGQGQGYRGTRRV
SQSGAECINWNSTSLRGKRFTARKTDASSLGLGNHNFCRNPDQDSSPWCYIYKGTEIVWD
YCPLPKCPEDKTKECVLGSGQSYRGTKSVTKSGSQCLPWDSPAVKRRMNAWNSNAAELGL
GNHNFCRNPDGDAAPWCHTYKNMALTWELCDIPKCSKQPSVITTLGPRAPSTNNNNRATC
GQRFDNTLNQPTFRMFGGKQSDITEQPWQAAINVYQPRYRTHFHRCGGVLINSCWVLSAA
HCFEINDNAEKLGVVLGRTFRKQNSSSEQIFSVEKYWIHEKFDNETFDNDIAILKLKTDF
GICAINSAEVRPVCLPDRGLVLPDWTECEISGYGKDTEFSAEFSERVKRGYVRLWPKERC
VPEVLSGRTVTANMLCAGDTRGLDDACKGDSGGPLVCRNDDKMTLMGVISWGDGCGQKDK
PGVYTRVTNYIDWINSKIQASPV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgcaggtggagctgctccgcaccaagcgagggactcgtttttacagagtgctg
tgtgtggatagtgagacgtcagcagtgcgtagttttggcgacacttggctgcgatggaag
ggacagcgtgtggagtattgccgttgtgctttaagaggaagggagctttgtcactttgtg
cccgtcatcaactgctacgtgtcccagtgctacaacggaggaacctgcaaggaggccttc
tactcgtcacagtacatctgtcagtgtccccccggcttcagtggagctcattgtgagatc
aacatgaacgagaagtgcgtcgtggggcagggccaaggttatcgtggcacacggagagtc
agccagtcgggagcagagtgcatcaactggaactcaacgtctctgcgaggaaagaggttc
acggctcggaaaacagacgccagcagtctcgggctgggcaatcacaacttctgcaggaat
cccgaccaggacagctctccttggtgttacatctacaaaggcactgagattgtgtgggac
tactgtcccttacccaaatgtccagaagataagaccaaagagtgtgtgctgggctcaggt
cagtcgtacagaggcacaaagtccgtcactaaaagtggctctcagtgtctgccgtgggac
tctcctgccgtcaaacggagaatgaatgcctggaattccaatgctgcagagctggggctg
ggcaaccataatttctgcagaaatccagatggtgatgcagctccgtggtgtcacacctat
aaaaacatggctctgacctgggagctttgtgacatcccaaaatgctcaaaacaaccatct
gtcatcactactcttggtccacgcgctccctccactaataacaacaacagagcaacatgc
ggccagcgtttcgacaacaccttgaatcaaccgacgttccgcatgttcggaggcaagcag
agcgacatcactgagcagccgtggcaggccgccatcaacgtttaccagccccgttacaga
acgcacttccaccgctgtggaggagtcctcatcaactcctgctgggtcctgtctgcagcg
cactgcttcgaaatcaacgacaacgcagaaaaattgggggtggttttggggagaacgttt
cgaaaacagaactcgagcagcgagcagattttcagcgttgagaaatactggatccacgag
aagtttgacaatgagacgtttgacaatgacatcgctattttgaagctgaagacggacttt
ggcatatgtgcaataaactctgcagaggttcgtccagtgtgtctgcctgaccggggcctg
gtgctgccagactggactgagtgtgagatctcaggatatggaaaagacacagaattttct
gcagagttctctgagcgtgtaaaaagaggatacgtccgcctttggcccaaagaacgctgt
gttccagaggtgctgtccggacgcacagttacagccaacatgctgtgtgcaggtgacacc
cgaggcctcgatgacgcctgcaagggagactccggtggccccttggtttgccgaaacgac
gacaagatgactctgatgggtgtgatcagctggggagatggatgcgggcaaaaagataaa
ccaggggtctacacacgggtcacaaactacatcgactggatcaacagcaaaattcaagcc
agcccggtctaa
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