Nematolebias whitei (Rio pearlfish): 119413052
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Entry
119413052 CDS
T08042
Symbol
smarcad1a
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119413052 (smarcad1a)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119413052 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
DEAD
HHH_3
Motif
Other DBs
NCBI-GeneID:
119413052
NCBI-ProteinID:
XP_037535992
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All DBs
Position
8:complement(16424767..16443551)
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AA seq
1059 aa
AA seq
DB search
MSLFNLDRFRFMKKSANKEDQVCETKRLDSEKENKPAQKKPIKTPSNSHARGVVFEEVYS
VDLEEDVVLPEPKKKTTPTKKFKPVKKAASNHTDDEDNEMDDKMSKLLEMFPQLTRTDVL
EVIRDTSTLEGAVAACLFKFGDKEAQSKNKKRKQDESSSSQDIREIQLNKKRRQSTSDEE
ENDKKEPNWEKQEAMVRRLQKKFPNQDKEELRMVLQEHEWNVEDALQVLQMFSDSENSSC
SAESEKTKSKSKDKSRRDHKVSRDHKFNSEKMVEEDKDHRDHSESDVNDSNDTDVTKDSE
EDSDSDDSESSQIKTYNSVHTSQAEKKSDSVSSSSSVKPTATSSFVTPSPSSPPFQTLPT
FSSETSIVKKQAAERKMKARSSQEPMSSEGESDQEEDIVTSEFENSDDDELDVECARPDL
RKDILTFFQTATKDELSLISGCSIKKAQKIVELRPFDTWESLWDVFHKGNGLSDDLLYGC
KVVLKERKVVLGLMSKCETISSKMVKRVTQVMESGKESSKQPGILNSQFELKPYQVIGLK
WLLLLHEHNLSGILADEMGLGKTIQAIAFLAQLFENDIHGPHLIVVPASTLDNWVRELKS
WCPSLKVLVYYGSVEERRYLKHDILNQEVDFNVIVTTYTLATGNDSDRSLFRKMHLEYAV
FDEGHMLKNMNTLRYRHLMAINAEHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTMQL
SKMFSMVSXKSYEEQSHFERNRISQAKLIMKPFILRRVKSEVLKQLPAKEEKIEFCSMSE
KQKALYEALLKKLKTSVIGEKRELCNVMMQLRKMANHPLLHRQYYTTEKLEAMSKLMLKE
PTHFDANPALIQEDMEVMSDFELHRLCRRYASISSFQLDDGLLLDSGKFHHLKELLTSIK
SQGDRVVLFSQFTMMLDIVEVLLKHLEYRYIRLDGSTPIAERIVLIDEYNTDPEILVFLI
STRAGGLGINLTSANVVILHDIDYNPYNDKQAEDRCHRVGQTRTVQVIKLISKDSIEDCI
LQLGHRKLKLEQDMTAAEQGDESTIPEDMASLLKASLGL
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcttcaatttagaccggtttcgtttcatgaagaaaagcgcaaacaaagaagac
caggtttgcgagaccaaaagactcgattctgaaaaggagaacaagccagctcaaaagaaa
ccaattaaaaccccatcaaattcccatgcacgaggagtggtttttgaagaagtctattca
gttgacttggaggaggatgtggttctccctgaaccaaagaaaaaaacaaccccaaccaag
aaatttaagcctgttaagaaggcagcatcaaaccatacagatgacgaggacaatgagatg
gatgacaaaatgagcaaattgttggagatgtttcctcagttgacaagaactgatgtttta
gaggtcattagggatacaagcacgctggaaggagctgtagctgcctgcctattcaaattt
ggggataaagaagctcagagtaaaaacaaaaagcgaaagcaggatgagtccagcagttct
caggatattcgtgagattcaactgaacaagaaaaggagacaatcaacctctgatgaagaa
gaaaatgacaagaaagaaccaaattgggagaagcaagaggccatggtgagacgactccaa
aaaaagtttcctaaccaggataaggaggagctgagaatggtgcttcaagaacatgaatgg
aatgttgaagatgctctgcaggttctacaaatgttctcagactcagaaaatagttcctgc
tcagctgagtcagaaaaaacgaagtcaaagagcaaagataagtcgaggagagaccacaaa
gtttcaagggaccacaaattcaatagtgaaaagatggtggaagaagacaaggaccacaga
gatcacagtgaatcagatgtgaacgattcaaatgatacagatgtcacaaaggacagtgaa
gaagattcagattcggatgacagcgaaagttcccaaatcaaaacttacaactctgttcat
acttcacaggctgagaaaaaatcagattcagtctcttcatcctcctctgttaagccaaca
gctacctcttcctttgtgacaccttccccttcctccccaccctttcagactttacccaca
ttttccagtgagaccagcattgttaagaagcaggcagctgagagaaagatgaaggcacgt
tcctcacaagaacctatgagttctgaaggggaaagtgatcaggaagaggacatcgtgaca
agcgagtttgagaactctgatgatgatgagctagatgttgaatgtgccaggccagattta
aggaaggacattctcacgttttttcagactgcaactaaagatgagctgtctttgatttct
ggctgctctataaaaaaggcccagaagattgtggaactgaggccttttgatacatgggag
agcctgtgggatgtttttcataaaggaaatggactttcagatgatttgttgtatggctgc
aaagttgtcctcaaagagcggaaggttgtcttgggactcatgtccaagtgtgagaccatt
tcttccaaaatggtcaaacgggtcacccaggtcatggaaagtggaaaagaatcttcaaaa
cagcccggcatactcaacagccagtttgagcttaaaccgtatcaggtgattggtttgaag
tggctgttgctcctgcatgaacacaatctgagtggtatcctcgcagatgaaatgggtttg
ggaaaaactatccaggctatagcatttttagctcagctgtttgaaaatgacatacatggt
cctcatcttattgttgtgcctgcctccacacttgataactgggttagagagctgaagtcg
tggtgtccaagccttaaagtccttgtttattatggctctgttgaagagcggcgctacctc
aaacatgacatcctcaaccaggaagttgacttcaatgtcattgtcaccacgtataccttg
gccacaggaaacgacagtgaccgtagccttttccgcaagatgcatctggagtacgccgtg
ttcgatgaaggccacatgttgaagaacatgaacactctgcgttatcgtcaccttatggct
attaatgctgagcatcgcctgctgctgacgggaactcctttacagaacaaccttctggag
ctgatgtcactcttgaacttcatcatgccctccatgttctccagttccacaatgcagctc
tccaaaatgttttccatggtaagttaaaaatcttatgaggaacaaagtcattttgagagg
aatcgtatttctcaggccaaactcatcatgaaaccatttatcctgcgacgtgtcaaaagt
gaggtcctcaagcagctgccagctaaagaagaaaaaatagagttctgctccatgagtgag
aaacagaaggctctctatgaagcactcttaaaaaaattgaaaacttcagttattggagag
aagcgtgagctgtgtaacgttatgatgcagctgaggaagatggccaaccaccctcttctt
catagacaatactacaccacagaaaagcttgaagccatgagcaaacttatgcttaaggaa
ccaacacactttgatgccaatcctgccctgattcaagaagatatggaagtgatgtcagac
tttgagctgcatcgtttgtgtcggcgatacgcctcgatcagctccttccagcttgatgac
ggtcttctgctggactctgggaagtttcaccaccttaaagagctgctgacatcaattaaa
agccagggagaccgggtggtgttattcagtcagtttaccatgatgctggacattgtggaa
gtgctgctaaaacatcttgagtatcgttacatcagacttgatggatccacacctatagct
gagaggattgtgctgattgatgagtacaacacagaccctgagatactggtgtttctgata
tcgacccgtgctggtgggctcggtatcaacctaacctcggcaaatgtagtcattctgcat
gacatcgactacaatccttacaacgacaagcaggccgaggatagatgccatcgtgtgggc
cagaccagaactgtgcaggtgatcaagctgatcagtaaggacagcatagaggactgcatc
ctgcagctcggccacagaaaactaaagctagaacaagacatgactgctgctgaacaaggt
gatgagagcaccatacctgaagatatggcatcattgcttaaagcctctctgggactgtga
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integrated database retrieval system
