Nematolebias whitei (Rio pearlfish): 119413086
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Entry
119413086 CDS
T08042
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03030
DNA replication
nwh03410
Base excision repair
nwh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119413086 (pole)
03410 Base excision repair
119413086 (pole)
03420 Nucleotide excision repair
119413086 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwh03032
]
119413086 (pole)
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119413086 (pole)
Enzymes [BR:
nwh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119413086 (pole)
DNA replication proteins [BR:
nwh03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
119413086 (pole)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
119413086 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
119413086
NCBI-ProteinID:
XP_037536027
LinkDB
All DBs
Position
8:21095891..21112218
Genome browser
AA seq
1951 aa
AA seq
DB search
MVLQNSGRFRADRGQSGADQENQDDGSSMSAVKRLERSQFTDDMDARFGFDRMKEPGERT
GWLINMHPTEILDEDKRMISAVDYYFIQEDGSRFKVALPFKPYFYVATKKNCEREVVSYL
SRKFQGKVAKLENLPKEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREIAPAVRKNKER
EQSNDAYTSMLSSALSGGGVTSAGDDGTSKSIADQLDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRGSTYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSESIEDFEFTPKPEYEGPFTVFNEDDEAALIQRWFDHVQETRPNIF
VTYNGDFFDWPFVETRAALHGLSMHREIGFQKDSQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEGTMRHAVEEEEKIPLEQVTNFNEV
CEEIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GASCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPALFPNGPARAFHTLNREEQAKHE
KKRLADYCKRAYKKTRVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQDSGDAAEVKRSKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKTSNEKKPKVTISYPGAMLNI
LVKEGFTNEQYHELVEPASLTYNIRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYS
KAANMPDAELFDLISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYI
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFSSEGKRQVTHQP
LEVGETADIEDFGMPARPLQPAILISTKRKRASQGDDSQVESQDVELTQSWREILGPPPP
TGTTREERLVWLRYHKKKWELQLRQRREKQKRRKLLDGEVQPVSGGVIRGGPATGLGSFL
RRTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGV
AYKKVNRMLPRSNVVYYLYEYSVPEDMYQKHINEINADLSAPDIEGVYETQVPLLFRALV
QLGCVCMVNKHVVRGLAGRETDTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKAL
FGLFIPSQRKASIFILDTVRSNQMPNLSNLYTAERTALLEKTTEELLPPDKHTFEVRAEN
DIKAISRSLQRILLNYKEERRGPTLIALQSNWELRRLAAGMPVLEEFPVVPVHVVDEINY
NVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTARPDLGGKEADDSRLVMENDDWGSVEINAQGCYSTVCVELDLQSLAVNTI
LQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSMV
VGWVREITQYHNVYADNQVMHFYRWLHSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRL
GSTVVYGNFNRIILCTKKRRIDDAVAYVEYITNSIHSREIFHSLSISFSRCWEFLLWMDP
ANSGGVKGKLPSSVLYGEVPLCETGFPFTSS
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcaaaacagcggacggttcagggcggacagaggccaaagtggagcagatcag
gagaaccaggatgacggctcctccatgtcggccgtcaagcggctggagcgcagccagttc
accgacgacatggacgcgcgcttcggcttcgacaggatgaaggagcccggggagaggacg
ggctggctcatcaacatgcaccctacagagatcctggatgaagacaagaggatgatcagt
gctgtggattattacttcatccaggaggatgggagcagattcaaggtggctcttcccttc
aagccttatttctacgttgctactaaaaagaactgcgagcgagaggtcgtgtcatatcta
tcgaggaagttccaaggaaaagtggcaaagcttgaaaatcttccaaaggaggatctggat
ctgccgaaccatctggttggcctgaagagaagctacatcaagctgtccttcaacaccgtg
gacgatctcgtcaaagtcaagcgtgagattgcgccggccgtgcgcaaaaacaaggagcgg
gagcagtccaacgacgcctacacgtccatgctgtcgagcgctctgtcgggaggcggcgtg
acctcggcaggcgacgacgggacgtccaagagcatcgcagatcagctggacaacatcgtg
gacatgagagagtacgacgtgccgtaccacgtccgactgtccatcgacctcaagatccat
gtggctcactggtacaacgttcgataccgaggcagcacgtatccaccagagatcgtgcgc
agggatgaccttgtggagcgaccggaccccgtcgttttggcttttgacatcgagacgacc
aaacttcccctgaaattccctgatgcggagacggatcagatcatgatgatctcctacatg
atcgacggacagggctttttaatcaccaacagagagatcgtctccgagagcatcgaggat
tttgagttcacgcccaagcctgaatacgaagggccttttaccgtttttaacgaggacgac
gaggcggccctcattcagaggtggtttgaccacgtgcaggaaacaaggcccaatatcttt
gtgacctacaatggagacttctttgactggccttttgtggaaacgcgggcagccctccat
gggctgagcatgcacagggaaatcggtttccaaaaggacagccagggggagtacaagtct
agtcaggccatccatatggactgcctgaggtgggtgaaaagggacagctacctgcctgtg
ggaagtcacaatctgaaggcagcagccaaggctaaactgggctacgacccggtggagctg
gaccctgaggagatgtgccgcatggcaactgaagaaccacagaccttagccacctactct
gtgtcagacgccgtggccacgtattacctgtacatgaaatatgttcaccccttcatcttc
gcgctgtgcaccatcatccccatggagcccgatgaggtgctgcgtaaaggctcggggact
ctgtgcgaagccttgctcatggtgcaggccttccacgccaacatcgtgttccccaacaag
caggagcaggttttcaacaagctcacagacgacggccacgtcatggactctgagacgtac
gtgggcggacacgtggaggcgctggagtccggcgtgtttcgcagtgacatcccctgtcgc
tttaaaatgaacccggctgcgtttgactttctgcttcaaagggttgaggggacgatgcga
catgccgtcgaggaggaggagaagatccctctggagcaagtgaccaactttaatgaggtg
tgtgaggaaatcaaaaagaagctgacgtccttgaaggaggttccaaacaggattgaatgt
cctctcatctaccatctggatgtcggggcgatgtaccccaatattatcctcaccaaccgc
ctgcagccgtcagcgatggtcgacgaggccacgtgcgctgcgtgcgacttcaacaagccc
ggcgcctcctgtcagaggaggatgacttggcagtggagaggagaaatcatgcccgcgagt
cgcagcgagttccaccgcatccagcagcagctcgagtctgagaagttccccgcgctgttc
cccaacgggccggcccgggccttccacaccctgaacagggaggagcaggccaaacacgag
aagaaacgtctggcagactactgcaagagggcctacaagaagacgcgcgtcacccggctg
gaggagcgagttaccaccatttgtcagagagaaaactccttctacgtggacacggtcaga
gcgttcagggatcggcgttacgagttcaaaggacttcataaagtgtggaagaagaagctg
tcggcggcgcaggacagcggagatgctgcagaggtgaagcgcagtaagaacatggagatc
ctgtacgactcgcttcagctggcccacaagtgtattctgaactctttctacggctacgtc
atgagaaaaggcgcccgctggtactccatggagatggccggcatcgtgtgctacaccggg
gccaacatcatcactcaggccagagagcttattgagcaaatagggaggccgcttgagttg
gacactgacggtatttggtgtgtgcttcccaacaccttccctgagaactttgtgataaag
acgagcaacgagaagaagcccaaagtgaccatctcctacccgggagccatgctgaacatc
ttggtgaaagaggggttcaccaacgagcagtaccacgagctggtggaacccgcgtcgctc
acttacaacatccggtcggagaacagcatcttcttcgaggtggacggaccgtatctggcg
atgatcctgcccgcctccaaggaggaagggaagaagctcaagaagaggtatgctgtgttc
aacgaagacggctcgttggctgagctcaaaggttttgaagtgaaacgaagaggggagctc
cagctcatcaagatttttcagtcctctgtgttcgaggctttcctcaaaggtaccactctg
gaggaggtctacgcgtctgtggctaaagtggccgactactggctggatgtgctgtacagc
aaggctgctaacatgccagatgcagaactgttcgacctgatttctgaaaaccgatccatg
tcccgaaagctcgaggactacggagagcagaagtccacgtccatcagcacagccaagagg
ctggcagagtttctgggagaccagatggtgaaagacgcaggtctgagctgtcgctatatc
atctcccgcaaaccagagggctcccccgtcacagaaagagccattcctctggccatcttc
caggccgagcccagcgtcaagaagcattttctccgaaagtggctgaagatgcccagcctg
cacgacctggacatacgctctattcttgactggagctattacattgagaggttgggcagt
gcaatccaaaaaatcatcacgatccctgcagctctgcaacaggtgaagaatcccgttcca
agagtgaggcatcctgactggcttcacaagaaactcctggagaaaaatgacatctacaag
caaaagaagataagtgagctgttctccagtgagggcaagagacaggtgacccaccagcct
cttgaagtgggagaaactgcagacatagaggacttcgggatgccagccagacccctgcag
cccgccatcctcatcagcaccaagaggaagcgggcttctcagggagacgacagccaggtg
gagtctcaggacgtggagctcacgcagtcctggagagaaatcctgggacctcccccacct
acgggaacgacacgggaggagcgtctcgtttggctgcgctatcataagaagaaatgggag
ctgcagctcaggcaaaggagggagaagcagaagaggagaaagctgttggatggggaagtc
caacctgttagtgggggggtgatcagaggtgggcccgccaccggcctggggagcttcctc
cgcagaacggctcgcagcatcctggacatgccgtggcagattgtgcagattgcagagacg
agccaccccggtctgtacaagctgtgggctgtgattggaaacgaccttcactgcatgaaa
ctcaacatcccgcgtgttttctacgtcaaccagaaagtcccaaagcaggaggagggagtc
gcgtacaaaaaggtgaaccggatgctgcctcgctccaacgtggtgtactacctgtacgag
tactctgtaccagaggacatgtaccagaagcacatcaatgagatcaacgctgacctctct
gctccagacatcgaaggcgtctacgaaacacaggtcccgttgttgttccgcgcgctggtg
cagctcggatgtgtgtgtatggtaaacaagcatgttgtgaggggtctggctggcagagag
accgacacctttgatctggaacatttggagatgaggtctctggcccagttcagctacctg
gaacctggaagtgttcgccacatgtatctgtatcatcacagccagggtcataaggctctg
ttcggcctgttcatcccctctcagcgcaaagctagcatcttcatcctggacacggttcga
agcaaccagatgcccaacctgagtaatctctacacggctgagcgcactgccctcctggag
aagacgacggaggagcttctacctccagacaaacacaccttcgaggttcgagctgaaaat
gacatcaaagcgatttcccgctcactgcagcgcatcctgctgaattacaaggaggagcgg
cgtgggcccaccctcatcgccctgcagtccaactgggagctgcggcgactagctgcaggg
atgccagtgcttgaggagttcccagttgttccagtacacgtggtagatgagatcaactat
aacgttctggactggcaacgtcacggagccaggagaatgatccgccattacctcaacctg
gacagctgcctgtctcaggcttttgacatggccaggtattaccacctacctgtgggtaat
ttgccccaggacgtgtccatctttggctcagacttgttcctagccagacatctacggaaa
cacaaccacctgctgtggctttcaccgacagccaggcccgacctcggaggaaaagaggca
gacgacagtcgtctggtcatggaaaacgacgactggggctctgtggagatcaacgctcag
ggatgttactccacagtgtgtgtggagctggacctgcagagcctggcggtgaacaccatc
ctccagtcgcagcacgttaacgacatggagggcggagccagtctgggcgttagttttgat
gtgatccagcaggcgtcgttggaggacatgatgtcaggaaaccagggcgccagtgcgctc
gctagctatgatgaaaccgctctctgctccaacacgttcaggatccttaaaagcatggtg
gttgggtgggtgagggagatcacgcagtaccacaatgtgtacgcagacaaccaggtgatg
catttctaccgctggctgcactcgccgagctctctgctgtacgacccggcgctgcaccgc
accctgcacaacatgatgaagaaggtgtttctgcagttggttgcagagtttaaacgtctg
ggctcgactgtggtttacggaaacttcaacaggatcatcttgtgtacaaagaaacggagg
atcgatgacgccgttgcttacgtagaatatatcaccaacagcattcactccagagaaatc
ttccactcgttgtccatctccttctcccgctgctgggagttcctgttgtggatggacccc
gctaactctgggggtgtgaagggcaagctgccgtccagcgtcctgtatggagaggtaccg
ctgtgtgaaactggtttcccctttacgtccagctaa
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integrated database retrieval system
