Nematolebias whitei (Rio pearlfish): 119413121
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Entry
119413121 CDS
T08042
Symbol
snx2
Name
(RefSeq) sorting nexin-2
KO
K17917
sorting nexin-1/2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119413121 (snx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119413121 (snx2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119413121 (snx2)
Membrane trafficking [BR:
nwh04131
]
Endocytosis
Macropinocytosis
Sorting nexins
119413121 (snx2)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
119413121 (snx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
FAM92
HR1
DUF3557
Motif
Other DBs
NCBI-GeneID:
119413121
NCBI-ProteinID:
XP_037536065
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All DBs
Position
8:3509681..3528905
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AA seq
511 aa
AA seq
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MTDAAAREPPPEHTDFHEMEDGEDLFLEPSPTLEESLPASLPAVDISTKSNGPKQDSLFD
DDTEDLFAEATEEVSLDSPERDVLLSDGPSPAITPITPPISVITPRIGHAHDDMFTHSSF
DEIEEEEAGNSLDIHISVSDPEKVGDGMNAYMAYKVTTKTSMSLFRQKDFSVKRRFSDFL
GLHSKLASKYLHVGYIVPPAPEKSIVGMTKVKVGKEDQSSNEFVEKRRSALERYLMRTVK
HPILLKDPDVLQFLESSELPRAVNTQALSSAGILRMVNKAADAVNKMTIKMNESDAWFEE
KQQHFENLDVQLRKLHASVESLVCHRKELSVNTAQFAKSAAMLGNSEDHTALSRALSQLA
EVEEKIDQLHQDQANADFYLFSELLGDYVRLITAVKGVFDHRMKTWQKWQDTQMLLQKKR
EAEAKLQLTNKPDKLQQAKDEIRELEGKVQQGERDFEQISKTIRKEVGRFEKERVKDFKS
IIIKYLESLVQTQQQLIKYWDAFLPEAKAIS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgcagcagcccgggagcccccgcccgaacacaccgacttccatgagatggag
gacggggaggacctgttcctggagccgagccccactctggaggagtctctgccagccagc
cttcctgctgtggacatcagcaccaagtcaaacggacccaaacaggactctctgtttgac
gacgacaccgaggatctgttcgcagaggccacagaggaggtgtcgttggacagtcctgag
agagacgtcctgctgtctgacggcccgtcccccgccatcacccccatcactcctcccatc
tccgtcatcacgcctcgcatcggccacgcccacgacgacatgttcacacactcctcgttt
gatgagatcgaggaggaggaagcgggcaactccttggacattcacatatccgtgtccgac
ccggagaaagtgggtgacgggatgaacgcgtacatggcctacaaagtgacgacgaagacc
tccatgtctctgttcaggcagaaggatttctccgttaaaaggcgtttcagtgattttctg
ggtctgcacagcaaactggcctccaagtacctgcacgtcggctacatcgtcccccctgct
ccggagaaaagcattgtgggcatgacgaaggtgaaggtggggaaggaggaccagtcgtcg
aacgagttcgtggagaagaggaggtccgctctggagaggtatctgatgaggacggtgaag
catcccatcctgctgaaggacccggacgtccttcagttcctggagagctcagagcttcca
cgcgccgtcaacactcaggctctgagcagcgctgggatcctgaggatggtcaacaaagct
gcggacgccgtcaacaagatgaccatcaagatgaacgagtcggacgcctggttcgaggag
aagcagcagcactttgagaatcttgacgttcaactgaggaaacttcacgccagcgtggag
tctctggtctgtcacaggaaagagctgtcggtgaacacggctcagttcgccaagtcggcg
gccatgttggggaacagcgaggaccacacggctctgtcccgagctctgtcccagctggcc
gaggtggaggagaagatcgaccagttgcaccaggaccaggccaacgccgacttctacctc
ttctctgagctactgggagactacgtccggctcatcaccgccgtcaagggcgtgtttgac
cacaggatgaagacgtggcagaagtggcaggacactcagatgttgctgcagaagaaaaga
gaagccgaagccaaacttcagctcaccaacaagccggacaagctgcagcaggccaaagac
gagatcagagagctggagggaaaagtccaacagggcgaaagagactttgagcaaatctcc
aaaaccatccggaaagaagtcggccgcttcgagaaagagagagtgaaggattttaaaagc
atcatcattaaatacctggagtccctggttcaaacgcagcagcagctcattaaatactgg
gacgccttcttacctgaagccaaggccatctcgtaa
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