Nematolebias whitei (Rio pearlfish): 119413202
Help
Entry
119413202 CDS
T08042
Symbol
zgc:152968
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119413202 (zgc:152968)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nwh03009
]
119413202 (zgc:152968)
Ribosome biogenesis [BR:
nwh03009
]
Eukaryotic type
Pre-60S particles
RNases
119413202 (zgc:152968)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
119413202
NCBI-ProteinID:
XP_037536164
LinkDB
All DBs
Position
8:complement(9376551..9384015)
Genome browser
AA seq
1106 aa
AA seq
DB search
MFPSSGLFAQVSCPFVQRGRCERPHCLYKHVTESWNAFGGLFKSSSVLDLTGNGRPCGGP
VKDESTDECLHELERINKEIETVRHEVEQEQRRLSCYQTEQADSRIGVPISKFETRGPPL
SKDKTYARTKKYVVDNSKPRTDLEYDPLSNFSAALRSYSSPGEEHKVKNREAKRSRHAPV
DPTKPSTHQAQMSQSPSPALLSGSTEDCVLVIDVPLLPEKTSGQAQKAVTVKSFQVQKQE
VDKVKMETASLNPPPQSVKQLEVTVAVPPSIRDDVNKVHDCFLVENNQDSLTSDDAKESE
NVHGSAVDLSCLLESTSSVEKTTLMVELPAQDKAQSDCSPPVPYVVQDSQKMLSKVPGKM
QRNSTMNKEQAEAAPCSSPLSFQDVSSSVNSHCRAESESTEQLLKAESKAVIIIDSSPDE
EEEEEEEEELNCANMELSDSDPMEECYRIFMEANSEERRNEEHPDTTAGPDMDDEKPKVN
TTLQALPGKKRVAHEATNLEQPLAKSRPQPQVLVPLREPAASGFGSRPSITSKIQQVQQR
ASMLTASVKAGQAFVSSTNQKKPETQSAPSGPGPENLQPDPVHSAYLNYIPVGTTVIEVG
NNLHLILPQGSFPLSVASTSSPVTSVLTPVNRVHPSPVSFNQPNNLPTVTALPRYRPAAP
VLIAAPARRPVLNSGFASTLHSTAAPTTSQAPVQAAVKSRPLLKRKLKQPSEAAKDKVPH
DVRQRYVNMFTEEFLKTTLNVNDAFEKALAEERSVYNRSVNKLKYLSVAVNALKRLKNQN
VAAKSETKVQSQRPKGNIPLNRKKLKQNDDLALYESLKDYILTDEKIIENNYPVQHPEKT
GSAVYFADKKVNTDPLKRICCRCGATYSVSQTGKHVRKEECNYHYGKGVEKRVPGGVETR
YSCCQGTMGAPGCQVFKLHVHDSLSLDGFVSTAQRHPSDTSCPGVYSLDCEMCYTLQGLE
LSRVTVVNSNLQVIYDTFVRPDNEVIDYNARFSGISEADMKGNRTPLREVQETLLSFISA
DTILVGHELETDLCLLKLLHGMVVDTSVIFPHRLGPPYKLSLNSLTAEHLRRIIQESVCG
HDTAEDAAACMELMLWKMKEDGKLKK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttcgtccggtctttttgctcaagtaagctgccctttcgtacaacgagggcgc
tgcgagcggccccattgtttgtacaaacatgtcacagaatcgtggaatgcgtttggtggc
ttgtttaaatcgtcgtccgtcctggacctaacagggaatggcagaccttgtggaggacca
gtgaaggatgagtctacagacgagtgcctccatgagctggagagaatcaacaaggagatc
gaaactgtaaggcacgaggtggagcaggagcaaagacgcctgtcgtgctaccagacggaa
caggcggacagcagaatcggtgtccccatctcaaagtttgaaaccaggggcccaccttta
agcaaagataaaacctatgcacgaacgaagaagtacgtggtggacaactcaaaaccaagg
actgatttagagtacgaccctttgtccaatttttctgctgccttgcgctcgtacagttca
ccaggtgaagagcacaaagtgaaaaaccgagaagcaaagagatctagacacgcgcctgta
gatccgacgaaaccgtccacccatcaagcacagatgtcccaatcaccatctccagcgctc
ctcagtggctccaccgaagactgcgtcctggttattgatgttcctttattgcctgagaaa
acgagtggtcaagcacagaaggctgttacagtcaaatcttttcaggttcagaaacaagaa
gtggataaggtaaaaatggagactgcttcactcaatcctccaccacagagcgttaaacag
cttgaggtaactgttgctgttccaccctcaataagggacgacgtaaataaagtgcacgac
tgttttttagttgaaaataatcaagattcacttacttctgatgacgctaaagaatctgaa
aatgttcatggaagtgcagttgatttatcttgtcttcttgaatctactagtagtgttgag
aaaacgaccctgatggtggagctaccggctcaggacaaggctcaaagtgattgctctcct
cctgtgccatatgttgtgcaagacagtcagaaaatgttgagcaaagtaccaggaaagatg
cagaggaactctaccatgaacaaggagcaagcggaggcggctccatgcagcagtccgctt
tcatttcaggacgtttcatcctctgtaaactcacactgcagagctgaatccgaatccacc
gagcagcttctgaaggcggaaagtaaggcagtgataataatcgactccagccctgatgaa
gaagaagaggaagaggaggaggaagaactcaactgtgcaaatatggagctttctgacagt
gacccaatggaggaatgctacaggatcttcatggaggcgaacagtgaggaaaggagaaat
gaggagcatcctgacacgactgctggacctgatatggatgatgaaaagccaaaggtcaac
accacactccaagctttaccagggaagaagagggtggctcatgaagccacaaatctagag
cagccactggctaaaagcagacctcagccccaagttcttgtgcctcttcgggagccagct
gcttcaggttttggctctcggccttccatcacttctaagatccagcaggtacaacagcga
gcctccatgctgactgcttcagttaaagctgggcaggcgtttgtttcctctacaaatcag
aagaagccagagacgcaaagtgcaccttctggcccaggccctgaaaaccttcagcctgat
ccagtgcacagtgcgtatttgaactacatccctgtgggaactacagtcattgaagtaggc
aacaacctgcacttgatcctaccacagggtagcttccctctgtctgttgcctccacctcc
agcccagttacttcagtgctaactccagtgaatcgagttcatccgagtcctgtctcattc
aaccagcctaataatctacccacagttacagccttgccaagatatcgcccagctgcacct
gtgctcattgctgctcctgcacgaaggcctgttctcaactctgggtttgcatcaacttta
cattcaacagctgctcccaccacttctcaagctcctgtccaggcagctgttaagtcaaga
cctctacttaaacgaaagctgaaacagccctctgaggctgcgaaggacaaagttccccat
gatgttcgtcagcgttatgtgaacatgttcacggaggagtttctcaaaacgacactcaat
gtcaatgatgcttttgagaaggccctcgctgaggagagaagtgtctacaaccgcagcgtg
aacaagcttaaatatctgagtgttgcagtcaatgcactgaagaggctgaagaaccaaaac
gttgccgctaaaagtgaaacgaaggtccagagtcaaagaccaaaaggcaacatcccatta
aacaggaagaagttaaagcaaaatgatgatttggctttgtatgaaagtttgaaagattat
attttgactgatgaaaaaattattgaaaacaactatcctgtccagcatccagaaaaaact
ggttctgctgtttattttgctgacaagaaagtgaatacagatccccttaagaggatctgc
tgtcgatgtggagccacatactctgtgagtcaaacaggcaaacacgtccgcaaggaggag
tgcaactaccattatgggaaaggagttgagaaaagagtgccaggtggagtagagactcgc
tacagctgctgtcagggaaccatgggagctcctggatgtcaggtgtttaagttgcatgtc
catgattctctcagtttggatgggtttgtttctactgcccagagacatccctcagacacg
agctgtcctggggtttactccttggattgtgaaatgtgttacactcttcaaggtctggag
ctgtccagagtgaccgtggtcaactctaaccttcaggtcatctatgacaccttcgtcaga
cctgataacgaggtgatcgactataatgccaggttttcaggcatcagtgaggcggatatg
aagggtaatcgtacccctctcagagaggtccaggagaccttgttgagcttcatcagtgcc
gacaccattcttgttggacacgagctggaaacagacctctgtttactgaagctgcttcat
ggaatggtggtggacacatcagtgatcttcccccatcgtctaggtccaccttacaagctg
agcctgaacagcctcacagctgaacacctcaggaggattatccaagagagtgtttgtggc
catgacactgccgaagatgcagctgcctgcatggagctcatgctgtggaagatgaaagaa
gatgggaagctaaaaaaatga
DBGET
integrated database retrieval system
