Nematolebias whitei (Rio pearlfish): 119413248
Help
Entry
119413248 CDS
T08042
Symbol
slc8a1b
Name
(RefSeq) sodium/calcium exchanger 1b isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04020
Calcium signaling pathway
nwh04260
Cardiac muscle contraction
nwh04261
Adrenergic signaling in cardiomyocytes
nwh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
119413248 (slc8a1b)
04020 Calcium signaling pathway
119413248 (slc8a1b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119413248 (slc8a1b)
04261 Adrenergic signaling in cardiomyocytes
119413248 (slc8a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119413248 (slc8a1b)
00536 Glycosaminoglycan binding proteins [BR:
nwh00536
]
119413248 (slc8a1b)
Transporters [BR:
nwh02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
119413248 (slc8a1b)
Glycosaminoglycan binding proteins [BR:
nwh00536
]
Heparan sulfate / Heparin
Others
119413248 (slc8a1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
CFSR
Motif
Other DBs
NCBI-GeneID:
119413248
NCBI-ProteinID:
XP_037536213
LinkDB
All DBs
Position
1:67885677..68048101
Genome browser
AA seq
949 aa
AA seq
DB search
MGCWDCTTVLSPALRLAVVTGILLLKLHPTLAGAPPEPNLGSSVLAVSTNKTECTKAEQC
ERGVLLPVWEPRNPSFGDKVARATVYFVALVYMFLGVSIIADRFMASIEVITSQEREITI
KKPNGETTTTTVRVWNETVSNLTLMALGSSAPEILLSVIEIIGHGFQAGTMGPSTIVGSA
AFNMFVIIGLCVYVVPDGETRKVKHLRVFFVTAAWSIFAYIWLYLILSVISPGVVQVWEG
LLTFFFFPICVVFAWVADRRLLFYKYVYKRYRTGKQPRMIIETEGDRPLPSKVDIEMDGK
MLNSHGGDFLDGPLGLDLDEKDLDEEETRRDMAKILKELKQKHPDKEVEQLIELANYQVL
SQQQKSRAFYRCQATRLMTGAGNILKKHAADQARKAVSMHEVRSDAGDNDPISKIYFEPG
SYQCLENCGTVAVNVARRGGDLGKAVSVEYRTEDGTANAGSDYEFTEGVVVFKPGETMKE
IRVGIIDDDIFEEDENFLIHLSNVKVLTSEGEEPEESESANHVDSVACLGIPSTATITIF
DDDHAGIFTFEEPVLHVSESIGTMEVKVLRTSGARGVVMVPYKTVEGTARGGGEDFEDTH
GVLEFQNDEIFKTIKVKIIDDEEYEKNKTFYIEIGDPHLVESDDAKGQEEEEEQKEKGEE
EEPLTKKDEEERRIAEMGRPMLGDHVKLEVIIEESYEFKNTVDKLIKKTNLALLVGTNSW
RDQFIEAITVSAGEDDDDEECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTDYWNGWACF
VVSICMIGLLTAVIGDLASHFGCTVGLKDSVTAVVFVALGTSVPDTFASKVAAIQDQYAD
ASIGNVTGSNAVNVFLGIGVAWSIAAIYHNSKGEDFKVDPGTLAFSVTLFTIFAFISVAT
LMYRRRPDIGGELGGPRTAKVLTTMLFISLWLLYILFSSLEAYCHIQGF
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgggctgctgggattgcaccaccgtcctgtcgcctgctctgaggctagcagttgttact
gggatcctcctacttaagctccatcccacactggccggagcccctcctgagccaaatttg
ggcagctcagttttggcggtgtccacaaataaaactgaatgcaccaaggctgaacagtgt
gaaaggggggtcttgctacctgtttgggagccccggaacccatcgtttggtgacaaggtt
gccagggcaacagtttattttgtggctttggtttacatgttcctcggtgtgtcaatcatt
gcagaccgtttcatggcatcaatagaggttatcacatcacaggaacgagagatcaccatc
aagaaacccaatggagaaaccaccacaaccactgttcgggtctggaacgagacggtgtcc
aatctcaccctcatggctctgggctcctcggctcctgaaatccttctgtctgtcatagaa
attataggtcatgggtttcaggctggcacgatgggcccctctaccattgtgggatctgca
gcgttcaacatgtttgtcatcatcgggttatgtgtgtacgttgtgcccgacggcgagacg
aggaaagtgaagcaccttcgtgtcttctttgtcacggccgcctggagtatcttcgcctac
atttggctctacctgatcctgtctgtgatctctcctggagttgtgcaggtgtgggagggc
ctgctcactttcttcttttttcctatttgtgtggtgtttgcctgggtggctgaccgccgc
ctgctgttttacaagtatgtgtacaagcgttaccgcactggcaagcagcctcggatgata
attgagacagagggtgatcgtccgcttccttccaaggtggacattgagatggatgggaag
atgctgaactctcatgggggtgactttctggatggtcctcttggcttggatcttgatgag
aaggatctggatgaggaggagactcgccgagacatggcgaagatcctgaaggagctgaaa
cagaagcaccctgacaaagaggtggaacaactcatcgagcttgccaactaccaagttctg
agccagcagcagaaaagtcgagctttctatcgatgccaagccacccggttgatgacaggt
gccggcaatattctaaaaaaacacgctgccgatcaggcacgaaaggccgtcagcatgcac
gaggttcgctctgatgctggtgataacgatcccatctccaagatctattttgagcctggt
tcttaccagtgccttgagaattgcggcacagtggctgtgaatgtggcgcggcgaggcggc
gacctgggcaaagctgtttctgtggagtacagaacggaagacggcacagccaatgctggc
tccgactacgagttcacagagggcgtggtggtgttcaagcctggcgagacgatgaaggag
atccgtgtgggcatcattgatgacgacatctttgaggaggatgaaaacttcctcattcac
ctttctaatgtcaaggtgttgacgtcagaaggtgaagagccagaggaaagtgaatcggct
aatcacgtggactctgtggcatgccttggcataccctccacagcaaccattaccatattt
gatgatgaccacgctggtatctttacatttgaggagcctgttctccatgtcagtgagagc
attggtacaatggaggtgaaggtgctgagaacatccggggctcgaggtgtggtcatggtg
ccatacaaaacggttgaaggaacagcccgtggtgggggagaagacttcgaagacactcat
ggcgtcctggaatttcaaaatgatgaaatctttaaaaccatcaaagtgaaaataattgac
gacgaggagtacgagaagaacaaaaccttctacattgagatcggggatcctcacctggtt
gagagcgatgacgccaaaggtcaggaagaggaggaagagcagaaggaaaagggagaggaa
gaggagccactgacgaaaaaggatgaagaggagcggcgcatagcagaaatgggccgcccc
atgctgggtgatcatgtcaaactggaggtcattattgaggaatcgtatgagttcaagaac
acagtggacaagctcataaagaagaccaacctggctctgttggtaggaaccaacagctgg
agagaccagttcatagaagccatcactgtgagcgcgggcgaagatgatgacgacgaggag
tgcggtgaggagaagctgccctcgtgctttgactatgtcatgcacttcctcacggtcttc
tggaaggttctgttcgccttcgtcccacccaccgattattggaacggctgggcctgcttc
gtcgtctcaatctgtatgatcgggctccttactgccgtcatcggagatctggcttctcat
tttggctgcacggtgggcctgaaagactccgtcacagcagttgtatttgttgcactggga
acttctgtgccagatacatttgccagtaaggtagctgctatccaagatcagtatgcagat
gcatccattggtaatgtgacaggctccaatgctgtcaatgttttcctgggcatcggggtg
gcatggtccattgctgccatctaccacaacagcaagggggaggactttaaagttgatcca
ggcactctggctttctctgtcactctctttaccatatttgcctttatttctgttgccact
ctgatgtaccgacggcgaccagatattggtggagagcttggcgggccccggactgcgaag
gtcctgaccaccatgctgttcatcagcctgtggctcctctacattctcttttcatcactg
gaggcctattgccacatccaaggcttttaa
DBGET
integrated database retrieval system
