Nematolebias whitei (Rio pearlfish): 119413335
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Entry
119413335 CDS
T08042
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03022
Basal transcription factors
nwh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119413335 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
119413335 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119413335 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119413335 (gtf2h3)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119413335 (gtf2h3)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119413335 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
PUB62-63_C
Motif
Other DBs
NCBI-GeneID:
119413335
NCBI-ProteinID:
XP_037536304
LinkDB
All DBs
Position
8:19428807..19432412
Genome browser
AA seq
299 aa
AA seq
DB search
MASEEEINLLVIVVDVNPIWWGQQAQREPEFTLSKCMDAVMVMGNAHTAMNRTNKLAVIA
SHCQDSHFLYPTKSLKHGDGGDDASSSKDGKYELLSVANNIITEEIKNLMTKTEVTGNST
DTLLAGSLAKALCYINRVSKKMEVGQDVKSRILVIKAAEDCALQYMNFMNVIFAAQKHNI
LIDACVLDSESGLLQQACDITGGVYLKIPQKIALAQYLLWVFLPDSEQRTQLVLPPPAHV
DYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKPKKKKMKLPV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaggaggaaattaatctcctggttatcgttgtggatgtgaaccctatatgg
tggggtcaacaagctcaacgtgagccagagttcactttgtctaagtgcatggatgcagtc
atggtgatgggaaatgctcacacagccatgaacaggacgaacaagctggctgtcatcgct
agtcactgtcaggacagtcacttcctgtatcccactaagagtttgaaacatggggacggt
ggcgacgacgcatcctccagcaaggatggaaaatatgaactcctgtctgtcgccaacaac
attattacggaagagatcaagaaccttatgaccaaaactgaagtgacaggaaactcaact
gatactctgctggcgggatcccttgctaaagccctctgctatattaacagggtctcaaaa
aagatggaagttggacaggacgttaaatcgaggatactggtgataaaagcagctgaggac
tgtgccctgcagtacatgaacttcatgaatgtgattttcgctgcacagaaacataacatc
ctgattgatgcctgtgtgttggactcagagtcaggactccttcagcaggcttgtgatata
actggaggagtatatctgaaaataccacagaaaatagccctggcacagtatctgctgtgg
gtgttcctgcccgactcggagcagcgcactcagctggtgctgccgccacctgctcacgtg
gactacagagccgcctgtttctgccaccggaacctcatcgaaattggttacgtgtgctcg
gtttgtttgtcaattttctgcaacttcagccccatttgcacaacatgcgagactgcattt
aaaatccaactaccacagatggtcaagcccaaaaagaagaaaatgaagctgccagtgtga
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