Nematolebias whitei (Rio pearlfish): 119413352
Help
Entry
119413352 CDS
T08042
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119413352 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119413352 (usp39)
Spliceosome [BR:
nwh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
119413352 (usp39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
119413352
NCBI-ProteinID:
XP_037536325
LinkDB
All DBs
Position
8:19866043..19870372
Genome browser
AA seq
504 aa
AA seq
DB search
MIVGEMISLKRERKAEVDDDDNEDGVVAKRGRGRIVEDRRSRHCPYLDTINRSVLDFDFE
KLCSISLSHINAYACLICGKYFQGRGQKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEI
IDSSLEDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQ
AFSNVPPLRNYFLEEENYKGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ
AVVLCSKKTFQITKQGDAVDFMTWFLNALHGALGGTKKKPSIITKAFQGSMRIFSKKLPH
PDLTPEEKEVLLQTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKF
NGNTEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLSE
YLTEEAQATEKNTSYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYEMQDLQVIDILPQMI
TLSEAYIQIWKRQGSSDSNSHTGE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgatagttggtgagatgatttctttaaagcgagagaggaaagctgaggtggacgacgat
gataacgaagacggagttgtagctaaaagaggacgaggacgtatagtagaagaccggaga
agccgccactgtccttaccttgacacgataaacagaagtgttcttgattttgacttcgaa
aagctctgctccatctctctatcccacatcaatgcttatgcttgccttatatgtgggaaa
tactttcaaggcagaggtcaaaagtctcatgcatacactcacagtgtccagtttacccat
catgtgttcctcaacctgcacacactcaagttttactgtctgccagataactatgagatc
atcgattcatcattagaagatatcacgtatgttctgaagccaactttcacaaagcaacac
attgcagggttggacaagcagggtaaactgtacagagcctatgatggtacaacctacctg
cctggcattgtgggtcttaacaacatcaaagccaacgactacgctaatgtggtgttacag
gctttttccaatgttccacctttgcgaaactacttcttggaggaggaaaactacaaggga
atccgcagaccaccaggggacatcatgtttctcctagtccagaggtttggtgagctgatg
cgcaaactttggaatccaagaaacttcaaggcccatgtgtctcctcacgagatgctgcaa
gctgtggtgctgtgcagcaagaagacttttcaaattaccaaacaaggtgacgcggtagac
tttatgacgtggttcttgaatgctcttcacggtgctcttggaggcacgaagaaaaagcca
tcaataatcacaaaagcgtttcaaggctctatgcggatcttctccaagaaacttccacac
cctgacttgacaccagaggaaaaagaagttctgctccagactgaggagtaccaggagcag
atgtctgagtccaccttcctgtttctgactcttgacctcccaacagctcctctgtacaaa
gatgagaaggagcaacttataatcccacaggttccactcttcaacatcctgggcaaattc
aatggcaatacagaaaaggaatacaaaacctacaaagagaattttctcaaaaggttccag
ttgaccaagctgccaccttacctcatcttttgcatcaaaagattcaccaagaacaacttc
tttgtggaaaaaaatccaacaattgtcaattttccaatcacaaatgtagatctttcagag
tacctgacagaagaagctcaagctacagagaagaacacttcttacgaccttgttgcaaac
gttgtgcatgatgggaaacccactgaaggatcgtacagaatacacgttctgcatcatggt
acggggaagtggtacgagatgcaggatctgcaggtgatcgacatccttccccagatgatc
acactgtcagaagcttacatccagatctggaagagacaaggcagtagtgactcaaacagc
cacacgggggagtaa
DBGET
integrated database retrieval system
