Nematolebias whitei (Rio pearlfish): 119413371
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Entry
119413371 CDS
T08042
Symbol
sart3
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119413371 (sart3)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119413371 (sart3)
Spliceosome [BR:
nwh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119413371 (sart3)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
119413371 (sart3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
LSM_int_assoc
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
RRM_occluded
FAT
RRM_MARF1
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
119413371
NCBI-ProteinID:
XP_037536347
LinkDB
All DBs
Position
8:complement(20592230..20603510)
Genome browser
AA seq
946 aa
AA seq
DB search
MAAPSNAEQTQLQDMEEDEAGMEEKEMESDEEEEGMGVENSDDEQDDSSEDEKENEAEIQ
RLEEQLSINAFDYNCHVDLIKLLKQEGELFRLRKARQKMSELFPLTEEIWLDWLKDEIRL
TEEDSKRENVYELFERAIKDYICPDIWLEYAQYSIGGMGSPGGMDKVRSIFERAVTAVGL
HMTKGQMLWEAYREFENAILSTVQPPPGRTPSREEQELLNSQLERIHTLFRRQLAVPLID
MEATYAEYEEWSENGVPETVIHLYRKALQQMEKRKFCEEALLVAEPPKLSEYQAYIDFEL
KEGDPARIQITFERALAENCLVPDMWTKYATYLDRQLKVKDLVLSTHERAVRNCPWTMSL
WKSYLLALERHGADHHTVSDVFEKALNAGFIQATDYVEIWQAFLDYLRRRVDFTKESSKE
LEELRAAFSRSLDYMKQDVEERFGESGDPSCVIMQTWARIEARHCKNMQKARELWDNIMT
KGNAKYANMWLEYYNLERAYGDTAHCRKALHRAVQCTSDYPEHVCEVLLTFERVDGSLED
WDTAVQKTETKLNRINEQRAKAAEKEANLARQEEERIEQRRKAKTDKKAQKKTQKGIRAG
EKRKAEQDHNQDEWNKDSAPKRQRADGGNNTDEYMETETGLSGRNAPPGYKPAPGSTKHP
QQAPLVSSQRQNDDKPELRDDSSSVFISNLTYTLEEPEAKLKTLFESCGPIKQIRPIFSN
KGSFKGYGYVQFESVASVPEALKLDRQEVEGRPMFVSPCVDKNKNPDFKVFKYNTSMEKH
KIFISGLPFSCTKEQLEELCKSHGTIKDIRLVTYRSGKPKGLAYVEFADETQASQAVLKM
DGTEVEGNKISVAISNPPRRNLMDKAGSSRPMADLMPRQVYGARGKGRTQLSLLPRSLHR
QTATAGKVENGTAAEQASASVNTAEHAAGDPRSLSNSDFAKMLLNK
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccaagtaacgcagaacaaacgcagttgcaagacatggaggaggacgaagca
ggaatggaggagaaagagatggaatcggacgaagaggaggagggcatgggtgtagaaaat
tcagacgacgaacaggacgactcgtcggaggacgagaaggaaaatgaagccgaaatccaa
cgtttggaggagcagctttcgatcaacgcttttgactacaactgtcacgtggatctcatc
aaacttctgaaacaggagggagaacttttccgtctacgaaaggcgaggcagaaaatgagc
gagctcttccctctcactgaagagatctggctggactggctcaaggatgagatccggctg
actgaggaggattcaaagagagagaatgtatatgagctctttgagcgagccatcaaagac
tatatctgtccagacatctggcttgaatatgcccagtactctattggtggcatggggtcg
ccaggtggcatggacaaggtgaggtccatttttgagagagcggtaacagctgtgggactt
cacatgaccaaggggcagatgctgtgggaggcttacagagaatttgagaacgcaattttg
tccacagtgcagcctcctcctggcaggactcccagccgcgaggagcaggaactgctcaac
agtcagcttgagcgaatccatacactgttccgccgccagctggccgttcctttaatcgac
atggaagccacgtatgctgaatatgaggagtggtctgaaaacggcgtgcctgagacggtc
atacatctgtacagaaaggctttgcagcaaatggaaaagcgcaaattttgtgaagaagct
ctgctagttgcagaacctcctaagttgtcagaatatcaggcctacattgactttgaacta
aaagagggcgacccagcacggatccagataacctttgagcgggctctggcagagaactgc
ctggtaccggacatgtggaccaaatacgccacatatcttgatcgtcagctgaaggtcaaa
gacttggttctctccactcatgagcgagctgtcagaaactgcccctggaccatgagtctg
tggaagagctacttactggccctggagaggcacggagctgaccatcacaccgtgtcagat
gtttttgagaaggcgttgaacgcaggcttcatccaagcaacagattatgtagaaatctgg
caggcgttcctcgactacctgaggagacgtgtggatttcactaaagaatcaagtaaagag
ttagaagagttacgagcagccttctctcggtctctagactacatgaaacaagacgttgaa
gaaaggtttggtgaaagtggagatccctcttgtgtcattatgcagacttgggcaaggata
gaggcccgccactgcaagaacatgcaaaaagccagagaactgtgggataatatcatgacg
aaagggaacgctaaatatgccaacatgtggttggaatactacaacttggaaagggcttat
ggggacactgctcactgcagaaaggctcttcacagagctgtgcagtgcacctcagactac
ccagaacacgtctgtgaagtcctgctcacatttgagagggtagatggttctttggaggac
tgggatacagcggtgcaaaaaacagaaacgaagctgaacagaattaatgaacaacgagca
aaggcagccgagaaagaagccaacctggcacgccaggaggaggagaggattgagcaacgg
cggaaggccaaaacagacaagaaggctcagaagaagacccagaagggcattcgtgctggg
gagaagagaaaagcggaacaagatcataatcaggatgaatggaataaggactctgctcct
aaaaggcagagagcagatggtggcaacaatacagacgagtacatggaaacagagactgga
ctttctgggaggaatgctccccctggatataaacctgctccaggcagcacaaaacacccc
cagcaggctccgttggtttcctctcagagacagaacgacgacaagccagagctacgagac
gacagctccagtgtgttcatcagcaacctgacgtacaccctggaggagcccgaggcaaag
cttaagacacttttcgagagctgtggtccaataaaacagatccgacccatcttcagcaac
aaagggagtttcaaaggttatggctacgtgcagttcgagtctgtggcatcagtccccgag
gctctgaaactggacagacaggaagtggagggcaggccgatgtttgtgtcaccttgtgtg
gacaaaaacaaaaatcctgactttaaggtttttaaatacaacacttcaatggaaaaacac
aaaatcttcatctctgggctgccgttctcatgcactaaagagcaactggaggaactctgt
aaaagtcacggcaccatcaaggacattcgtctcgtcacatatcgctctggaaaaccgaag
ggtctggcatatgtggagtttgcagatgaaactcaggcgtctcaggcagtgctgaaaatg
gatggcactgaagtggaaggcaacaaaatctctgttgctataagtaacccaccacgtaga
aacctgatggataaggctggttccagcaggcccatggcagacttgatgcctcgccaggtt
tatggagcgagaggaaaaggtcgaactcagctgtctttgcttcctcgttccctgcaccgt
caaacggcgaccgcaggcaaagtcgagaacgggaccgcagctgagcaagcgtcggcgtcc
gtcaacacggcagagcacgcagctggagatccgaggtctctgtcgaattcagactttgcc
aagatgcttctcaacaagtga
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