Nematolebias whitei (Rio pearlfish): 119413374
Help
Entry
119413374 CDS
T08042
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04517
IgSF CAM signaling
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119413374
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119413374
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119413374
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119413374
Intermediate filaments
Intermediate filament-binding proteins
119413374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PHA_gran_rgn
Motif
Other DBs
NCBI-GeneID:
119413374
NCBI-ProteinID:
XP_037536353
LinkDB
All DBs
Position
1:complement(70154234..70348065)
Genome browser
AA seq
2340 aa
AA seq
DB search
MTSVAAEFEHMEIQQQYNNEGVNNRWDVDEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDAL
LLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFN
LAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIE
TEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEK
GNLEVLLFTIQSKMRANNQKVYTPREGKLISDINKAWERLEKAEHERELALRTELIRQEK
LEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDISAYEERVQ
AVVSVAKELEAESYHDIKRITARKDNVIRLWEYLLELLKARRLRLELNLGLQRVFQEMLY
IMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQVDRVRNVNSNAQRFATDTD
GYKPCDPQIIRDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQ
ILSSEDYGKDLTGAVRLLSQHKAFEDEMSGRAAHLQQTIKQGDELVADNHFGAEKIKERI
QDIQEQWAALERLSAVRKSLLQEACNQHQFQADADDIDTWMLDVLRIVSSVDVGHDEFST
QALVKKHKDVAEEIGSYRPVIEALHEQARTLPPEKANSEEVQNRLAGVEERYKEVAELTR
LRKQALQDALALYKMLSEARACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMN
SQASRVAVVNQVARQLIHSGHPSEKEIKAQQDKLNTRWSQFRDLVDQKKENLNSALGVQN
YHLECNETKSWIKEKTKVIDSTQELGNDLAGVMALQRKLTGMERDLVAIEDKLNDLGKEA
ERLSSEHPEQSEAIKGRLDEITGVWGEMKDSLKNREESLGEASKLQQFLRDLDDFQSWLS
RTQTAIASEDMPNTLTEAEKLLAQHEGIKNEIRNYEEDYQKMRDMGEMVTQGQTDAQYMF
LRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPT
TLEAAEAAIKKQEDFMTTMDANEEKISGVVDTGRRLVADGNVNAERIQEKVDSIDQRRQS
NRQAANDLLTKLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAF
MAELQSNKEWLDKINKDGQALMSEKPDTEAMVKEKLASLKTMWDDLESTTQTKAKCLFDA
NKAELFTQSCADLDKWLTTLDGQLQSDDYGKDLTSVNILLKKQQMLESQVEVRQKEVGEL
QKQSQALSQEGKGSDEVDGQRITVEKKFQGLQAPLQKRRENLMASREIHQFNRDVEDEIL
WVEERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRYDDIFERSQHILREGSPMA
ELIRQRLADLQSLWEQIKKETENRHSRLNEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSSVAMLKKHQILEQAVEDYADTVHQLSSTSRGLVAAGHPDSERIGMRQSQVDKLY
AGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNRLADDLINSGHGDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEILNRILDKHKKIPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKNLLEAAEGRRVKLVDTGDKFRFFSMV
RDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTVCIELGKALLAR
KHYASDEIKEKLLQLTDKRKEMIDKWEDRWECLRLVLEVHQFSRDAGVAEAWLLGQEPYL
SSREIGQSVDDVEKLIKRHEAFEKSAATWEERFAALERLTTMELLEVRRRQEEEERKRQP
ADAADAQQREGEPASQNGLPAEAESPREAVDGADVVNGVSEPSPSGSPGAARKGKPSQAA
TLPAKTQHDTPTSLQDGFLHRKHEWEGHNKKASNRSWHNVYCVINQQEMGFYKDQKSASQ
GIPYHSEIPVCLKDAVCDVAVEYKKKKHVFKLKITDGNEYLFQAKDEDEMSSWISTISTS
IAGEKSEVTPSSHSTPAPAPAARAQTLPASVATTTTAAESSPGKREKDKEKRFSLFSKKK
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggtggcggcggagttcgaacacatggagatccagcagcagtacaacaacgaa
ggcgtcaacaaccgctgggatgttgacgaatgggacaacgagaacagctcggctcggctg
tttgagcgctcacgcatcaaagctctcgcagacgagcgcgaggcggtccagaagaagacc
ttcaccaagtgggtcaactcccatctgtccagagtgtcctgcagaatcacagacctctac
atggacctgagggacggacgcatgctcatcaagctactggaggtcctgtcaggagagaga
ctgcccaaacccacaaagggccgcatgaggatccactgtctggagaatgtggacaaggct
ctgcagttcctgaaggagcagagggttcacctggagaacatgggctcccacgacattgtg
gacgggaaccaccgtctgactctgggactcatctggacaatcatcctccgcttccagatt
caggacatcagtgtggagacggaggacaacaaggagaagaagtctgctaaagatgctctt
ctactctggtgtcagatgaaaactgcaggatatccaaacgtcaacatccacaacttcacc
accagctggagagacgggatggccttcaacgctctgatccacaaacacaggcccgacctg
attgattttgacaaacttaagaaatccaacgctcactacaacctgcagaatgccttcaac
ctggctgagcagcacctcggcctcaccaagctgctggaccctgaagacatcagcgtggac
caccctgatgagaagtccatcatcacctacgtggtcacctactatcactacttctccaag
atgaaggcgctgaaggtggaggggaagaggatcggcaaggttctggataacgccattgag
acggagaagatgatcgagaagtacgagtctctggcgtctgacctgctggagtggatcgag
cagaccatcatcatcctcaacaacaggaagttcgccaactctctggtcggagtccagcag
cagctgcaggccttcaacacataccgcactgtggagaaaccaccaaagtttacagaaaaa
ggaaacctggaggttcttctgttcaccatccagagtaaaatgagagcaaacaatcagaaa
gtttacactcctcgagagggaaaactcatctctgacatcaacaaggcatgggagcgtctg
gagaaggcggagcacgagcgggagctggcgctgaggacggagctgattcgtcaggagaaa
ctggagcagctcgctcggaggtttgatcgtaaagccgccatgagggagacgtggctgagt
gagaaccagaggctggtctcacaggataactttggatttgacctgcaagctgttgaagct
gccacaaagaaacatgaagccatagaaacggacatatccgcctacgaggagcgcgttcag
gctgtggtttccgtggcgaaggagctggaggcggagagttaccatgacatcaagcgcata
acggcaaggaaagacaacgtgatccggctgtgggagtatcttctggagctgctgaaggcc
cgcagactgagactggagctgaacctggggctgcagagggtcttccaggagatgctctac
attatggactggatggacgagatgaagatgctgctgctctctcaggattatgggaaacac
ctgctgggtgtggaggacctgctgcagaaacacgccttggtggaggctgacattggcatc
caggtggaccgggtccgaaacgtcaacagcaacgctcagagattcgctaccgacaccgac
ggttataaaccctgtgaccctcagatcatcagggaccgcgtggctcacctggagttctgc
taccaggagctgacccagctggcagccgagcggagagctcgcctcgaggagtcccgccgc
ctctggaagttcttctgggagatggctgaagaggagggatggatcagagagaaggagcag
atcctctcctccgaggattatgggaaggatctaacgggcgctgtgcggctgctgagtcag
cacaaagccttcgaggacgagatgagcgggcgagccgcccacttgcagcagaccatcaaa
cagggcgacgagctggtggccgacaaccactttggagccgagaaaatcaaagaacgtatc
caggacatccaggagcaatgggcggctctggagcgtctctctgcagtccgtaaatctctt
cttcaggaagcttgcaaccagcaccagtttcaggctgatgctgatgacattgacacttgg
atgctggacgttctgcggatcgtctccagcgtcgatgtcggtcacgatgagttctccact
caggctctggtgaagaaacacaaagatgttgccgaggagatcggcagctaccgacccgtc
atcgaggctctgcatgaacaggcccggacactaccaccggagaaggccaactctgaggag
gttcagaaccggctcgcaggcgttgaggagcggtacaaggaagtggcagagctgacccgg
ctcaggaagcaggccctgcaggacgccctggcgctctacaagatgctgagtgaagccaga
gcctgcgaggtatggatcgacgagaaggagcagtggctcaacagcatggagatccctgag
aaactggaggacctggaggtcatccagcaccggtttgagagtctggagcctgagatgaac
agccaggcgtcccgtgttgcagtggtcaaccaggtggctcggcagctgatccacagtgga
catcccagtgaaaaggagatcaaggcccagcaagacaaactcaacaccaggtggagtcag
ttcagagacctggtggaccagaagaaggagaacctgaactctgctctgggtgtccagaac
taccacttggagtgtaatgagaccaaatcctggattaaagagaagaccaaggtgattgac
tcgacccaagagctggggaacgacttggctggtgtcatggctctgcagaggaagctgact
gggatggagcgggacctggtggccatcgaagacaagctgaacgacctgggcaaagaggca
gagcgcttatcctccgaacacccagagcagtctgaggccattaaaggacgtctggatgag
attactggcgtctggggcgagatgaaggactcgttgaagaaccgcgaggagtccctgggc
gaggccagcaagctgcagcagttccttcgtgacctggatgacttccagtcatggctgtct
cgaactcagaccgccatcgcctctgaagacatgccaaatacgttgaccgaggccgagaag
ctgctggctcagcatgagggcatcaagaacgagatccgtaactatgaggaggactaccag
aagatgcgggacatgggcgagatggtgacgcagggtcagacggatgcccagtacatgttc
ctgcgacagaggttacaggcgctcgacaccggctggaacgagctgcacaagatgtgggag
aacagacagaatctgctgtcccagtctcacgcctaccagctgttcctgagggacaccaag
caggccgaggccttcctcaacaaccaggagtacgtcctggctcacacggagatgcctacc
accctggaagcagcggaggccgccattaagaagcaggaggacttcatgaccaccatggat
gccaacgaggagaagatcagcggtgtggttgacacggggcgccgcctggtcgcagatggc
aacgtcaatgccgagcgcatccaggagaaggtggactccattgaccagagacgccagagc
aaccgacaggctgccaacgacctgctgacgaagctaaaagacaacagagacctgcagaag
ttcctgcaggactgccaggagctgtcgctgtggatcaacgagaagatgctgaccgctcag
gacatgtcgtacgatgaggccaggaacctgcacagcaagtggctcaaacaccaggccttc
atggccgagctgcagtccaacaaggagtggctcgacaagatcaacaaggatggtcaggcg
ctgatgtcggagaaacctgacacggaggccatggtaaaagagaagctggcgtccctgaag
acgatgtgggacgacctagagtccaccacccagaccaaagccaagtgtctgttcgacgcc
aacaaggctgagctgttcacacagagctgcgctgatctcgacaaatggctgacgaccctg
gatgggcagcttcagtctgacgactatggcaaagatctcacctcagtcaacatcctgttg
aagaagcagcagatgctggagagccaggtggaggtgcgtcagaaggaggtgggagagctg
cagaaacagtcacaagccctgagccaggaggggaaaggctcagatgaggtggacggccag
aggatcaccgtggagaagaagttccagggcctccaggcgccgctgcagaagagacgggag
aacctgatggcctctcgtgagatccaccagttcaacagggacgtggaggacgagattcta
tgggtggaggagaggatgcctctggccacgtccacggaccacggacacaacttgcagacc
gtccagctgctcatcaagaagaaccagacgctgcagaaagagatccagggccaccagcct
cgatacgacgacatcttcgagcgcagccagcacattttgagggaaggcagccccatggca
gagctgatccgccagcgactcgcagacctccagtctctgtgggagcagatcaagaaagag
acagagaatcgccactcacgtctaaatgaggcccacaaggcccagcagtattactttgat
gctgctgaggccgaggcttggatgagcgaacaggagctctacatgatgtcagaggagaag
gccaaggacgaacagagttcagtggccatgctgaagaagcatcagatcctggagcaggct
gtggaggactatgccgacacggtccaccagctgtcgagcacgagccggggcctggtggca
gctggacaccccgacagcgagcgcatcggcatgcgccagtctcaggtggataagctgtac
gcaggcctgaaggatttgtccgaggagcgtcgggggaaactggacgagcgtttccgactt
ttccagctcaatcgggaggtggacgacttggagcagtggattgcagagagagaggtggtg
gctggatctcatgagctcggccaggactatgagcacgtcactatgctgcaggaacgtttc
agggaatttgcacgcgacacaggaaacattggccaggagcgtgtggacaccgtcaaccgg
ttggcagatgacctcatcaactctggccatggcgacgccgccaccatcgctgagtggaag
gacggcctgaacgaggcctgggccgacctgctggagcttatcgacacgcgaactcagatc
ctcgctgcctcctacgagctccacaagttctatcatgatgccaaggagatccttaatcgc
atcctggacaaacacaagaagatcccagaggagctgggccgggaccagaatactgtggag
accctgcagaggatgcacaccaccttcgagcacgacattcaggctctgggaacgcaggtc
cggcagcttcaagaggacgccgtccgcctacagtctgcatatgcaggagacaaagctgat
gacattcagaagagagaaggagaggtcttggaggcctggaagaatctgctggaggcagct
gagggtcggcgggtgaagctggtcgacaccggtgacaagttccgcttcttcagcatggtg
cgtgacctgatgctgtggatggaggacgtgatccggctgatcgaggcccaagagaagccc
agagacgtctcatcagtggagctgctgatgaacaaccaccagggcatcaaggcagagatt
gacgctcgtaacgacagcttcactgtctgcatcgagctgggaaaagccctgctggcccgg
aaacactacgcttcagacgagattaaagaaaagttgttacagttgacggacaagaggaaa
gagatgattgacaagtgggaggacagatgggagtgtctccgactggtcctggaggtacac
cagttttcccgggacgcgggcgtggccgaggcgtggctgctgggtcaggagccgtacttg
tccagcagggagatcgggcagagcgtggatgacgtggagaagctcatcaaacgccacgag
gccttcgagaagtcggccgccacctgggaggagcgctttgcggcgctggagaggctgacc
acgatggagttactggaggtgagaagaaggcaagaggaggaggagaggaagaggcaacca
gcagatgctgctgacgctcaacaaagagagggcgagccagcatcccagaacgggctgcca
gcggaggcggagtctcccagggaggccgttgatggggctgacgtggtgaacggggtgtca
gagcccagtccatcagggtctccgggggcggcacgtaagggcaaacccagccaggcggca
accctgccggctaaaacccagcatgacaccccgacgtctctgcaggatggctttctgcac
cgcaagcatgagtgggagggccacaacaagaaggcctccaacaggtcctggcacaacgtg
tactgtgtgatcaaccagcaggagatgggtttctacaaggaccagaagagcgccagtcag
ggcatcccctaccacagcgagatccccgtctgcctgaaggatgccgtgtgcgacgtagct
gtggagtacaagaagaagaagcacgtctttaaactcaagatcactgacggcaacgagtat
ctgttccaagccaaagatgaagacgagatgagctcctggatatcgactatctccacctcc
attgcgggcgagaagtcagaggtcacgcccagcagccacagcacgcctgcccccgcgccc
gccgctcgcgctcagacgctgccggcctccgtggcaacgacgacgacggctgccgagtcg
agccccggcaaacgagagaaagacaaggagaaacgcttcagtctgttcagcaagaagaaa
tag
DBGET
integrated database retrieval system
