Nematolebias whitei (Rio pearlfish): 119413389
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Entry
119413389 CDS
T08042
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119413389 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119413389 (ube3b)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119413389 (ube3b)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
HECT type E3
119413389 (ube3b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
119413389
NCBI-ProteinID:
XP_037536366
LinkDB
All DBs
Position
8:complement(21019111..21027020)
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AA seq
1068 aa
AA seq
DB search
MFSVPQSSKSEFLDKARQAREERKGQKEKEKAATTIQALVRRFLCRCRLQKQIRKEVDEY
FQANDTGTTKRNALPIFKVARKLLFIYSQDDKTRFEKLCRAILASMEVENEPKVWYVSLA
LSKDLTIPWLKQIKDVLWTCCQLLKGLKPDILQDNKLVTLYLTMLVTFTDTSTWRIIRGK
GEALRPALTRICENIMGHLNQKGFYSSLQILLTNGLARSKPSLSKGTLTAIFTLSMRPVI
AAHFSDNLLRSFLIHIMSVPAIVYHLNVLTPECMASIQTHELLRKFILFLNREEQCLDIC
VCLEGSHTLCLLGNLIYLGYLNVKVIEEEANHFVKDLTDMLSYCQRYVSQKKSNLTHWHP
VLGWFSQTVDYGLNESMPLVTKQLQYLWGVSVIRTLFSDVLSKKLESQEPTPPPPQPSTS
QNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTALSTLTQIRLQ
ILTGLTHLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLAMLVLFCDCSRHLI
TILDDIEVYEEQTSFKLEELITISFFLNTFVYKMIWDGILENAKGDKLELFHSVHGWLMV
LYERDCRRRFTPDDHWLRKDLKPSLLFQELEKGKKRAQLLLQYIPHVIPHKNRVLLFRNI
VTKEKESLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGK
MLGKAIYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDV
GDLGLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFI
RGFRSIINPEWLHMFSTPEVQRLISGDNAEIDLDDLKKHTVYYGGFHSSHRVILWLWDIL
SSDFNAEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgtccctcaaagctccaagtccgagttcctggataaagccagacaggctaga
gaggaaagaaagggacagaaagagaaggagaaagcagcaaccaccattcaagctctggtc
aggagattcctttgtcgctgcagactccagaaacaaataagaaaagaggttgatgaatat
tttcaagctaatgacactgggacaacaaagagaaatgctcttcccatttttaaagtggct
cgaaagttactgttcatatacagccaagatgataagacgagatttgagaagctctgtcgt
gctattctggccagcatggaggtggaaaatgaacctaaagtctggtatgtttccttggct
ctttccaaagacctcaccattccctggctcaaacagattaaagacgtgctgtggacctgc
tgtcaactactaaaaggtttaaagccagacatacttcaggataacaagttagtaacatta
tacctcacaatgctggtgaccttcactgatacatcaacgtggcggatcatccgaggaaaa
ggtgaagctctcagacctgctttgacaaggatttgtgaaaatatcatgggccatctcaat
caaaagggattctattcatctttacagattttacttaccaatggcttggctcgttctaaa
ccatcgctctccaaaggaactttgacagccatttttactttgtcaatgaggccagtcatt
gctgcgcacttctcagacaacctgctaagatcattcctcatccacatcatgtcggttcct
gccatcgtataccaccttaatgtgctgactccagagtgcatggcatccattcagacgcac
gaactgctgcggaagtttattttgtttctcaatcgggaggaacagtgtctggacatctgt
gtgtgccttgagggcagccacacactatgcctacttggcaatctgatctacttgggttac
cttaatgtgaaagtcatagaagaggaggcaaaccattttgtgaaagacctgactgacatg
ctgtcatactgccagagatatgtgtcacagaagaagtccaaccttacccactggcacccc
gttctgggctggttttctcaaactgtagactatggtctgaacgagtcgatgccactggtc
accaaacagcttcagtacctgtggggtgtttctgtaatccggacgctcttcagcgatgtc
ctctctaaaaagctggagagtcaggagcccactcccccacccccacagccaagcacatct
caaaacaatctgccagttaaaaatctcttcaagagagcgtttcagaagtcggcttcagtg
cgaaacattctgaaaccagtcggagggaagcgagtggactccgctgaagttcagaaagtg
tgcagcatctgtgtcctctaccagactgctctgtccacactgacacaaatacgcctccag
attctcactggtttgacacatctggatgaccttttacccaaactgtgggccttcatctgt
gagcttggacctcaggggggtctcaaacttttcatggagtgtctgaacaatgacaccgaa
gagtccaaacagcttctggctatgctcgtgctcttctgtgactgctcacgtcacctcata
acaattctggacgatattgaagtgtacgaagaacaaacctctttcaaactggaggagctc
atcaccatctccttttttctgaacacatttgtgtacaagatgatttgggatggcatcttg
gaaaatgcgaaaggagataaactggagctgttccacagtgttcacggctggctgatggtg
ctctacgaacgagactgcaggcggaggttcacgcctgacgatcactggctacgcaaggat
ctgaagcctagcctgttgttccaagaactggagaaaggcaagaaaagagcccagctttta
ctgcagtacatcccacatgttatcccacataaaaatagggtgctgctgttcagaaacatt
gtcacaaaggaaaaagaaagtttaggattggtagaaacaagctctgcctcaccgcacgtc
acccacattaccattcgtcgttctcggatgctggaggatggatacgaccagctccgcagg
ttgccagtgaattcgataaaaggtgtcattcgagtcaagtttgtaaacgacctcggtgta
gacgaggctggaatcgaccaagatggcgtctttaaagagtttctagaggaaatcattaag
aaagttttcaatccagctcttaatctgttcaagacgacaagtggaaatgaaagattatat
ccttcgcctacatcctacatccacgagaatcatttgcagctgtttgagtttgtaggaaag
atgctcgggaaagctatttacgagggaattgttgtggacgtcccgtttgcctccttcttc
ctcagtcaagtcttgggccaccatcacagcacgttttacagctctattgatgagctcccc
tccctggactcagagttttataaaaaccttacctccatcaagcgctatgatggcgatgtg
ggggatctggggctgacgttgtcctatgatgaagatgttatggggcagcttgtctgtcat
gagttgatacctggaggaaaaacgatgccagtcaccaatgaaaacaagatcagctacatc
catctgatggctcactttcggatgcacacgcagattaaagagcaaacggccgctttcatt
cggggtttccgcagcatcattaatcccgagtggctgcatatgttttccacgcccgaggtt
cagcggcttatctctggagataacgctgaaattgatctagatgacctcaagaaacacacc
gtctactacggaggtttccacagcagtcatcgtgtcatcctctggctctgggacatcctg
tctagcgattttaatgccgaagagagggctatgtttcttaaatttgttaccagctgctca
aggccacctcttctaggttttgcttacctcaaaccacctttttctattcgctgtgtggaa
gtttcagatgatcaggacactggagacaccctcggcagcgtcctcaggggcttcttcacc
atccgaaagaaggagcccggcggtcgacttcctacttcatccacgtgcttcaacctgctc
aagctgcccaactacagcaagaagagcatcctgcgtgacaaactgcgctacgccatcagc
atgaacacgggcttcgagctctcctaa
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integrated database retrieval system
