Nematolebias whitei (Rio pearlfish): 119413409
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Entry
119413409 CDS
T08042
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119413409 (tfip11)
Spliceosome [BR:
nwh03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
119413409 (tfip11)
Other components
Complex C specific factors
119413409 (tfip11)
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
119413409
NCBI-ProteinID:
XP_037536386
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Position
8:21450606..21455532
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AA seq
832 aa
AA seq
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MSMSHLYGRREEEDEGVEVESFEVTEWDLANEFNPERQRFRQTKEQATYGIWAERDSDED
ERPSFGGKKSKDYTAPVSFVSAGLRKTATEEKQEKEGSDDSDDDSAAPPPPPPSRVTAPK
KLQMGNFRGHQSQRFAGGIQSGQGIGNWEKHTRGIGQKLLQKMGYQPGKGLGKNAQGIIN
PIEAKVRKGKGAVGAYGNERTRQSLQDFPVVDSDEEEEKEFQKELGQWRKDPTASGVKKK
PKYSYKTIDELKAKGKMANRSTPASAGELAQVKVIDMTGKEQKVYYSYTQMSNKHSVPDE
APPTLSSRDQRGPGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVTLSHESQALQ
GRLEAEQKSIQRMEAVLALVERFPSEDMAPGEGPTLQECAQIFETLQTDYYEEYKTMGLA
DLAVSVVHPLLKEKLFLWDPLKDSAYCLEDIGLWRAILESRDMQSSGPHSDMDPYHRLLW
EVWIPVMRSCVSGWQPRMVGPMVDCVEMWTPILPTWILDHLMEQIILPRLQREVDNWNPL
TDTVPIHSWIHPWLPLLQSRLEPLYPPIRSKLSNALQRWHPSDASARLILQPWKNVFTVG
AWEAFLLKNIIPKLALCLEELVINPHQQQMEPFHWVMDWEGMLSPSSLVSLLDKNFFTKW
LQVLCSWLSNSPNYEEITKWYLGWKTMFSDVLLAQPLIKEKFNEALDIMNRAVSSGVGGY
MQPGARENIAYLTQTERRKDFQYEALQERRDAESVAHRGISAGVPTNFKDLIQTKAEENN
IVFMPLVGKRHEGKQLYTFGRIVIFIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtcccacctttacggacgcagggaggaggaagatgaaggtgtggaggtggag
agcttcgaggtgaccgaatgggatttggccaatgagtttaacccggagcggcaaagattc
aggcagaccaaggaacaggcaacttatggcatctgggctgagagggattcagatgaagat
gagaggccaagctttggtggcaagaaatcaaaagactacactgctccagtgagctttgtg
agcgctggtttgcgtaagactgcaactgaggagaaacaggagaaagaaggttccgatgac
tctgatgatgattctgctgcgcctcctcctcctcctccttcacgtgtgactgcacccaaa
aagctccagatgggtaatttccgtgggcatcaatcccagaggtttgctggtggtatacag
tctggacagggtatcgggaactgggagaaacacacgagggggattggacagaaacttttg
caaaaaatgggctaccaacctggaaaaggcctgggcaaaaatgcccaaggtattataaac
ccaattgaggcaaaggttcgtaaaggtaaaggagcagttggtgcttatggcaacgaacga
actcggcagagtcttcaggactttcctgtggttgattcagatgaagaagaagaaaaggaa
tttcagaaagaacttggccagtggcgtaaagatccgactgcttctggagtaaaaaagaaa
cctaagtactcttacaaaactatagatgagctgaaggctaaaggtaaaatggcaaatcga
agcacaccggcatctgcaggagagctggcacaggtcaaggtaatagatatgactggaaaa
gagcagaaagtgtactacagttacactcaaatgtccaacaaacacagtgttccagatgaa
gctcctccaaccttgtcctctcgagatcaaaggggacctggctttgctctccctgagctt
gagcataacctgcagcttctgatagaccttaccgagcaggacattttacagtctgccaga
cgtttacagcatgaaaaagatgtagtggttactttgagccatgagtcacaagctttgcag
ggcagactagaggcagagcaaaagtccatccaaagaatggaagctgttttggccttagtg
gagcgttttccttctgaagacatggcaccaggggaaggaccaacactacaggagtgtgct
caaatatttgagacattacaaactgattattatgaagaatataaaacaatgggattggcc
gacctggctgtatctgttgttcatccactgctcaaggagaaacttttcttatgggaccct
ttgaaggacagtgcttattgtctggaagatattggtctatggagagccatccttgaatcc
agagacatgcagtccagtggtccacattcagatatggatccttaccacaggctgttatgg
gaggtgtggattccagtgatgcgatcttgtgtgtcaggctggcagcctcgaatggtcggg
ccaatggtggactgtgtggaaatgtggactcctattttgcccacatggatcctggatcac
ttgatggagcagattatcttaccccgactgcagcgagaggttgataactggaaccctcta
actgacacagtgcctattcattcatggattcatccatggctacctctactccagtcacgt
ctcgagcctctttacccaccaattaggagcaaactgtccaacgctttgcagcggtggcat
cccagtgatgcttcagcccgcctcattcttcaaccatggaaaaatgttttcacagttggt
gcatgggaggctttcctgctgaaaaatatcatccccaaactagcattatgcctggaagaa
ctggttataaatcctcaccagcagcagatggagccatttcactgggtgatggactgggag
ggcatgctttccccctctagcctcgtttcactgctggacaaaaactttttcacaaaatgg
ttgcaggttctgtgttcatggctgagcaacagcccgaactatgaagaaatcactaaatgg
taccttggctggaaaaccatgtttagtgacgttttgttggcacagccgctcattaaagag
aaattcaatgaagctttggacatcatgaaccgtgcagtatcttctggcgtgggtggctat
atgcagcctggtgcaagagagaatattgcatatctcacccagacagagagacggaaagac
tttcagtatgaagctttgcaggaacgcagggatgctgagagtgtggctcacaggggcatc
agtgctggtgtgccaactaacttcaaagatctcattcagaccaaagcagaggagaacaat
attgtctttatgcccttagtaggcaaacggcatgagggtaaacagttgtacacatttggg
cgtattgttatcttcatagacaggggcgttgtgtttgtgcaaggagagaaaacttgggtt
cccacatctttgcagagtttgatagatatggcaaagtga
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