Nematolebias whitei (Rio pearlfish): 119413506
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Entry
119413506 CDS
T08042
Symbol
dtx1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119413506 (dtx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119413506 (dtx1)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119413506 (dtx1)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119413506 (dtx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
WWE_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_2
zf-RING_Vps41
zf-ANAPC11
zf_RING_Vps8
PHD_NSD
zf-UDP
Motif
Other DBs
NCBI-GeneID:
119413506
NCBI-ProteinID:
XP_037536491
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All DBs
Position
8:complement(29001203..29070001)
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AA seq
644 aa
AA seq
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MARPGSGLLVPMNGVGYPPQNLARVVVWEWLNEHGRWRPYSAAVCHHIENVLKGDARGSV
VLGQVDGQLAPYIIDLQSMHQFRQDTGTMRPVQRNFYEPSSAPGKGVVWEWENDNGSWTL
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMSQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKLYGGTVGNSGAMGTL
TAVRQSNTFTGTSLWSPTSGSSSTNNNNISVGGGISKSEPVQSPPSSVNFPCSPVMPSLS
SSHGHHALTINGQNNLNRPGTQRISMGTARGAVPPGVPALPVKNLTGSGPVHPALAGMTG
ILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGINGMRRKTKKKHLKRGKNPEDVVRR
YTEKIKVVPDEDCTICMERLVMSSGYEGILQQKGIKPELVGKLGKCGHMYHLLCLVAMYN
NGNKDGSLQCPTCKSIYGEKTGTQPPGKMEYHVIPHSLPGYLDSKTIRIVYDIPAGMQTN
EHPNPGKKFSARGFPRHCYLPDNEKGRKVLKLLIMAWDRRLIFTIGTSSTTGESDTVVWN
EIHHKTEFGSNLTGHGYPDPNYLDNVMTELLAQGVGEDNLKDNS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggctcggccaggatcagggctgctggtgcccatgaacggagtggggtacccccctcag
aacctggcccgggtggtggtctgggagtggttgaatgagcacgggcgctggaggccgtac
agcgcagccgtttgccaccacattgagaacgtactgaagggggacgcccgggggagtgtg
gtcctggggcaggtggatggtcagctcgctccttacatcatcgacctgcagtccatgcac
cagttccgacaggacacaggcaccatgagaccagtgcagaggaacttctacgagccgtcg
tcggccccaggtaaaggtgtggtgtgggagtgggagaatgacaacggctcatggacgctg
tacgacatggagatctgcgtgacaatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggcttctgctacctcatcgacttcaacagcatgtctcagaccaac
aggcagagtcagcgtaagcggcgcctgcgaagacgcatggacctggcctacccgctcata
atgggctccattcccaagtctcagtcatggccagtgggggccagctctggtcagccctgc
tcctgccagcagtgcatcctggtcaacagtacaagagcggcctcgaacgctatcctggcc
tctcagcggcgcaagctatacggagggacagttggcaactcgggggcgatgggaaccctc
actgcagtgcggcagagcaacaccttcactgggacctccctgtggtctccgacatccggc
tcttccagcaccaacaacaataatatcagcgtgggaggtgggatttctaaatctgaaccg
gtgcagtcgccaccgtcttctgtcaacttcccctgttcccccgtgatgccgtcactttca
tcctcccatggtcaccacgctctcaccatcaacggacaaaacaacctgaaccggccaggc
acccagcgcatctccatgggaactgcccgaggagccgttccacccggcgttcctgccctc
ccagtgaagaatctgacaggctcaggaccagtgcacccagcactcgcaggtatgacaggt
atcctgatgtgcgctgcaggtctgccagtttgcctgacgcgagctccaaagcccatactg
cacccaccccccatcaacaagagcgacatgaagcccgtgccggggatcaatggcatgcgc
cgcaaaaccaaaaagaagcaccttaagagaggaaaaaacccagaagatgtggtgcgaagg
tacacggagaagatcaaagtagttccagacgaggactgtaccatctgcatggagaggctt
gtaatgtcgtcaggctatgaaggcatcctgcagcagaaaggcatcaagccagagctggtg
ggcaaacttggcaaatgtggtcacatgtaccatctgctgtgcctcgtggccatgtacaac
aatggcaataaggatggcagtctgcagtgtccaacatgtaaaagcatctatggagagaaa
accggcactcagcctccagggaagatggagtaccacgttatcccccactccctccccgga
tacctcgactccaaaaccattcgcatcgtttatgacattcctgcaggaatgcagaccaat
gagcaccccaaccccggtaagaagttcagcgcgagaggattccctcgacactgctacctg
cctgacaacgagaaaggcaggaaggtcttgaagctgcttatcatggcctgggaccgccgg
ctcatcttcaccatcggcacgtccagcaccaccggagagtcagacacggtggtctggaac
gagattcaccacaagacagagtttggctctaacctgaccggccacggctaccctgacccc
aactacttggacaatgtgatgacagagctgttggcacagggtgtcggagaggacaacctc
aaggacaactcctaa
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